RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 SHC3Q92529 594 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 CMTM5Q96DZ9 223 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 EHD1Q9H4M9 534 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 ZFYVE28Q9HCC9 887 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 VTA1Q9NP79 307 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 EXOC7Q9UPT5 735 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 DDX60LQ5H9U9 1706 aaKnown RBP13.23□□□□□ -0.29
HERC3-203ENST00000407637 IQCA1LA6NCM1 817 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 H3BMQ9 156 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 GIPC1O14908 333 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 PFDN6O15212 129 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 TOM1L1O75674 476 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 TMEM63AO94886 807 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 TOP3BO95985 862 aaKnown RBP13.22□□□□□ -0.29
HERC3-203ENST00000407637 TCF4P15884 667 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 VAMP7P51809 220 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 BMXP51813 675 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 ZBTB17Q13105 803 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 FGD3Q5JSP0 725 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 FAM209AQ5JX71 171 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 TRIM72Q6ZMU5 477 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 MAVSQ7Z434 540 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 MAPKAPK5Q8IW41 473 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 WDR75Q8IWA0 830 aaKnown RBP13.22□□□□□ -0.29
HERC3-203ENST00000407637 PPIL6Q8IXY8 311 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 SLFN12Q8IYM2 578 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 PCYOX1LQ8NBM8 494 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 KBTBD7Q8WVZ9 684 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 COG8Q96MW5 612 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 RPF2Q9H7B2 306 aaKnown RBP13.22□□□□□ -0.29
HERC3-203ENST00000407637 OLAHQ9NV23 265 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 TMOD3Q9NYL9 352 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 SNCAIPQ9Y6H5 919 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 CFAP99D6REC4 459 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 ESRRBO95718 433 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 XRCC1P18887 633 aaPredicted RBP13.22□□□□□ -0.29
HERC3-203ENST00000407637 THOP1P52888 689 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 TXNL4AP83876 142 aaKnown RBP13.22□□□□□ -0.29
HERC3-203ENST00000407637 ITGADQ13349 1161 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 ARL13BQ3SXY8 428 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 C1orf220Q5T0J3 134 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 PLEKHA7Q6IQ23 1121 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 MFSD7Q6UXD7 560 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 CARM1Q86X55 608 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 TMEM126BQ8IUX1 230 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 FIBCD1Q8N539 461 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 SLC15A4Q8N697 577 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 ZSWIM2Q8NEG5 633 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 HPS1Q92902 700 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 ACSF2Q96CM8 615 aaPredicted RBP13.22□□□□□ -0.29
HERC3-203ENST00000407637 FIZ1Q96SL8 496 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 TMEM79Q9BSE2 394 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 CEP44Q9C0F1 390 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 PARVGQ9HBI0 331 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 STK39Q9UEW8 545 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 ARHGAP26Q9UNA1 814 aa13.22□□□□□ -0.29
HERC3-203ENST00000407637 A0A1W2PQ67 120 aa13.21□□□□□ -0.29
HERC3-203ENST00000407637 DYTNA2CJ06 578 aa13.21□□□□□ -0.29
HERC3-203ENST00000407637 A8MU76 341 aa13.21□□□□□ -0.29
HERC3-203ENST00000407637 KBTBD13C9JR72 458 aa13.21□□□□□ -0.29
HERC3-203ENST00000407637 BMP10O95393 424 aa13.21□□□□□ -0.29
HERC3-203ENST00000407637 WEE2P0C1S8 567 aa13.21□□□□□ -0.29
HERC3-203ENST00000407637 ACAT1P24752 427 aaKnown RBP13.21□□□□□ -0.29
HERC3-203ENST00000407637 HOXA10P31260 410 aaPredicted RBP13.21□□□□□ -0.29
HERC3-203ENST00000407637 BTDP43251 543 aa13.21□□□□□ -0.29
HERC3-203ENST00000407637 MXI1P50539 228 aa13.21□□□□□ -0.29
HERC3-203ENST00000407637 GDF10P55107 478 aa13.21□□□□□ -0.29
HERC3-203ENST00000407637 ESRRGP62508 458 aa13.21□□□□□ -0.29
HERC3-203ENST00000407637 TUBA4AP68366 448 aa13.21□□□□□ -0.29
HERC3-203ENST00000407637 BMPR2Q13873 1038 aa13.21□□□□□ -0.29
HERC3-203ENST00000407637 COL24A1Q17RW2 1714 aa13.21□□□□□ -0.29
HERC3-203ENST00000407637 TRIM16LQ309B1 348 aa13.21□□□□□ -0.29
HERC3-203ENST00000407637 AARS2Q5JTZ9 985 aaKnown RBP13.21□□□□□ -0.29
HERC3-203ENST00000407637 VWA5B1Q5TIE3 1220 aa13.21□□□□□ -0.29
HERC3-203ENST00000407637 LYSMD3Q7Z3D4 306 aa13.21□□□□□ -0.29
HERC3-203ENST00000407637 FAM178BQ8IXR5 827 aa13.21□□□□□ -0.29
HERC3-203ENST00000407637 NAT8LQ8N9F0 302 aa13.21□□□□□ -0.29
HERC3-203ENST00000407637 BHLHE22Q8NFJ8 381 aaPredicted RBP13.21□□□□□ -0.29
HERC3-203ENST00000407637 PPP1R14CQ8TAE6 165 aa13.21□□□□□ -0.29
HERC3-203ENST00000407637 TANKQ92844 425 aa13.21□□□□□ -0.29
HERC3-203ENST00000407637 AVENQ9NQS1 362 aaPredicted RBP13.21□□□□□ -0.29
HERC3-203ENST00000407637 ERGIC3Q9Y282 383 aa13.21□□□□□ -0.29
HERC3-203ENST00000407637 TMEM114B3SHH9 223 aa13.21□□□□□ -0.3
HERC3-203ENST00000407637 E7ESA3 106 aa13.21□□□□□ -0.3
HERC3-203ENST00000407637 PLOD2O00469 737 aa13.21□□□□□ -0.3
HERC3-203ENST00000407637 KRT1P04264 644 aa13.21□□□□□ -0.3
HERC3-203ENST00000407637 BPGMP07738 259 aa13.21□□□□□ -0.3
HERC3-203ENST00000407637 COX4I1P13073 169 aa13.21□□□□□ -0.3
HERC3-203ENST00000407637 ZNF26P17031 533 aaPredicted RBP13.21□□□□□ -0.3
HERC3-203ENST00000407637 JAK1P23458 1154 aa13.21□□□□□ -0.3
HERC3-203ENST00000407637 IREB2P48200 963 aaKnown RBP13.21□□□□□ -0.3
HERC3-203ENST00000407637 CDK8P49336 464 aa13.21□□□□□ -0.3
HERC3-203ENST00000407637 GNA12Q03113 381 aa13.21□□□□□ -0.3
HERC3-203ENST00000407637 ZBED5Q49AG3 693 aa13.21□□□□□ -0.3
HERC3-203ENST00000407637 PPP1R18Q6NYC8 613 aa13.21□□□□□ -0.3
HERC3-203ENST00000407637 ZFP1Q6P2D0 407 aa13.21□□□□□ -0.3
HERC3-203ENST00000407637 DRICH1Q6PGQ1 229 aaPredicted RBP13.21□□□□□ -0.3
HERC3-203ENST00000407637 ZNF720Q7Z2F6 126 aa13.21□□□□□ -0.3
HERC3-203ENST00000407637 POLNQ7Z5Q5 900 aa13.21□□□□□ -0.3
HERC3-203ENST00000407637 CTAGE3PQ8IX95 158 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms