RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 IRF2BP2Q7Z5L9 587 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 LRRTM3Q86VH5 581 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 OSTM1Q86WC4 334 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 MFSD6LQ8IWD5 586 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 TMC2Q8TDI7 906 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 PARD3BQ8TEW8 1205 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 LPIN3Q9BQK8 851 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 STK33Q9BYT3 514 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 PLA2G2FQ9BZM2 168 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 FAM129AQ9BZQ8 928 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 GANQ9H2C0 597 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 SNX25Q9H3E2 840 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 TASP1Q9H6P5 420 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 VRTNQ9H8Y1 702 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 DMAC2Q9NW81 257 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 SPATA6Q9NWH7 488 aaPredicted RBP10.92□□□□□ -0.66
COL5A1-202ENST00000371820 GTF3C4Q9UKN8 822 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 FBXO4Q9UKT5 387 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 CAPN6Q9Y6Q1 641 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 GPR179Q6PRD1 2367 aa10.92□□□□□ -0.66
COL5A1-202ENST00000371820 DMXL1Q9Y485 3027 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 SHISA7A6NL88 538 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 FAM170BA6NMN3 283 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 HEPACAM2A8MVW5 462 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 MAN2B1O00754 1011 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 LAMTOR5O43504 91 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 SOAT2O75908 522 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 PLEKP08567 350 aaPredicted RBP10.91□□□□□ -0.66
COL5A1-202ENST00000371820 KRT13P13646 458 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 UCHL3P15374 230 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 CD72P21854 359 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 TARSP26639 723 aaKnown RBP10.91□□□□□ -0.66
COL5A1-202ENST00000371820 WEE1P30291 646 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 GDI1P31150 447 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 NOP2P46087 812 aaKnown RBP10.91□□□□□ -0.66
COL5A1-202ENST00000371820 IRAK1P51617 712 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 EIF3BP55884 814 aaKnown RBP10.91□□□□□ -0.66
COL5A1-202ENST00000371820 CORO7P57737 925 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 CLDN10P78369 228 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 ENPEPQ07075 957 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 ZNF699Q32M78 642 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 ZNF667Q5HYK9 610 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 SMYD5Q6GMV2 418 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 FAM171BQ6P995 826 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 VSTM1Q6UX27 236 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 VITQ6UXI7 678 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 INTS8Q75QN2 995 aaKnown RBP10.91□□□□□ -0.66
COL5A1-202ENST00000371820 GAREM2Q75VX8 874 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 LIMS2Q7Z4I7 341 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 SLFN11Q7Z7L1 901 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 IQCKQ8N0W5 287 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 SUMF1Q8NBK3 374 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 OR6B3Q8NGW1 331 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 CSGALNACT1Q8TDX6 532 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 GIPC2Q8TF65 315 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 MRPS31Q92665 395 aaKnown RBP10.91□□□□□ -0.66
COL5A1-202ENST00000371820 CLDN23Q96B33 292 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 FAM81BQ96LP2 452 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 IMPG2Q9BZV3 1241 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 DNAI2Q9GZS0 605 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 RAB17Q9H0T7 212 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 KIF9Q9HAQ2 790 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 ZNF334Q9HCZ1 680 aaPredicted RBP10.91□□□□□ -0.66
COL5A1-202ENST00000371820 ADAMTS1Q9UHI8 967 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 TMEM59LQ9UK28 342 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 AMFRQ9UKV5 643 aa10.91□□□□□ -0.66
COL5A1-202ENST00000371820 NUP210Q8TEM1 1887 aaPredicted RBP10.91□□□□□ -0.66
COL5A1-202ENST00000371820 CEP250Q9BV73 2442 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 GOLGA6L10A0A0M3HER8 536 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 AGPSO00116 658 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 PGRMC1O00264 195 aaKnown RBP10.9□□□□□ -0.66
COL5A1-202ENST00000371820 NRG2O14511 850 aaPredicted RBP10.9□□□□□ -0.66
COL5A1-202ENST00000371820 TRIM66O15016 1216 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 CHADO15335 359 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 HEXIM1O94992 359 aaKnown RBP10.9□□□□□ -0.66
COL5A1-202ENST00000371820 CST3P01034 146 aaPredicted RBP10.9□□□□□ -0.66
COL5A1-202ENST00000371820 PON1P27169 355 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 GNL1P36915 607 aaPredicted RBP10.9□□□□□ -0.66
COL5A1-202ENST00000371820 AVPR1AP37288 418 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 HSPA9P38646 679 aaKnown RBP10.9□□□□□ -0.66
COL5A1-202ENST00000371820 RPS9P46781 194 aaKnown RBP10.9□□□□□ -0.66
COL5A1-202ENST00000371820 PDE6CP51160 858 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 MLLT6P55198 1093 aaPredicted RBP10.9□□□□□ -0.66
COL5A1-202ENST00000371820 MYL6P60660 151 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 NCOA4Q13772 614 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 GRM2Q14416 872 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 TCEAL1Q15170 157 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 SGSM1Q2NKQ1 1148 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 ZNF852Q6ZMS4 543 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 KDM7AQ6ZMT4 941 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 PEX26Q7Z412 305 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 ARID3BQ8IVW6 561 aaPredicted RBP10.9□□□□□ -0.66
COL5A1-202ENST00000371820 SCN4BQ8IWT1 228 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 RHOT2Q8IXI1 618 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 KIAA2013Q8IYS2 634 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 RASGEF1CQ8N431 466 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 MYCBPAPQ8TBZ2 947 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 KBTBD7Q8WVZ9 684 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 MYLPFQ96A32 169 aa10.9□□□□□ -0.66
COL5A1-202ENST00000371820 RMDN1Q96DB5 314 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms