RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 TFDP3Q5H9I0 405 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 SH3PXD2AQ5TCZ1 1133 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 BEND5Q7L4P6 421 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 BNIPLQ7Z465 357 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 CCDC50Q8IVM0 306 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 C12orf50Q8NA57 414 aaPredicted RBP12.58□□□□□ -0.4
USF1-203ENST00000368021 TEKT4Q8WW24 435 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 PIK3R5Q8WYR1 880 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 C8orf48Q96LL4 319 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 LRRC1Q9BTT6 524 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 TRIM62Q9BVG3 475 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 EPC1Q9H2F5 836 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 RRN3Q9NYV6 651 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 STAP1Q9ULZ2 295 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 NR2E1Q9Y466 385 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 BACE2Q9Y5Z0 518 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 COL4A4P53420 1690 aaPredicted RBP12.58□□□□□ -0.4
USF1-203ENST00000368021 H3BNC9 293 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 TNFRSF10BO14763 440 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 GRM6O15303 877 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 SOD2P04179 222 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 RALAP11233 206 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 CHRNA3P32297 505 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 GRIK1P39086 918 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 CDR1P51861 262 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 HDAC4P56524 1084 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 ATP11AP98196 1134 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 SIX1Q15475 284 aaPredicted RBP12.58□□□□□ -0.4
USF1-203ENST00000368021 TAZQ16635 292 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 CDO1Q16878 200 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 ZFYVE27Q5T4F4 411 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 SLC8B1Q6J4K2 584 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 CYP4V2Q6ZWL3 525 aaPredicted RBP12.58□□□□□ -0.4
USF1-203ENST00000368021 BHLHA9Q7RTU4 235 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 TAS1R1Q7RTX1 841 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 MAATS1Q7Z4T9 603 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 VSIG1Q86XK7 387 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 ZDHHC14Q8IZN3 488 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 DEFB106AQ8N104 65 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 SLC39A11Q8N1S5 342 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 PRELID2Q8N945 189 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 COLGALT1Q8NBJ5 622 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 CCDC26Q8TAB7 109 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 SPPL2BQ8TCT7 592 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 TMEM169Q96HH4 297 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 B3GALT6Q96L58 329 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 RUNDC3BQ96NL0 473 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 PAIP2Q9BPZ3 127 aaKnown RBP12.58□□□□□ -0.4
USF1-203ENST00000368021 DDX47Q9H0S4 455 aaKnown RBP12.58□□□□□ -0.4
USF1-203ENST00000368021 NGRNQ9NPE2 291 aaKnown RBP12.58□□□□□ -0.4
USF1-203ENST00000368021 AAASQ9NRG9 546 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 HOMER3Q9NSC5 361 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 ABI2Q9NYB9 513 aaPredicted RBP12.58□□□□□ -0.4
USF1-203ENST00000368021 STIM2Q9P246 746 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 MTRRQ9UBK8 725 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 STK39Q9UEW8 545 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 RWDD3Q9Y3V2 267 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 LRRD1A4D1F6 860 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 CCDC151A5D8V7 595 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 C3orf70A6NLC5 250 aaPredicted RBP12.57□□□□□ -0.4
USF1-203ENST00000368021 YJEFN3A6XGL0 299 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 E7ENQ6 273 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 C5orf67F2Z3F1 127 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 MDM4O15151 490 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 PHF2O75151 1096 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 ENDOD1O94919 500 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 LTFP02788 710 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 USP17L7P0C7H9 530 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 RARAP10276 462 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 CPB1P15086 417 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 PPM1AP35813 382 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 CDKN2BP42772 138 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 SLC5A3P53794 718 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 BRD3Q15059 726 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 SMTNL2Q2TAL5 461 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 DCAF6Q58WW2 860 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 MFSD7Q6UXD7 560 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 SPOCD1Q6ZMY3 1216 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 ADAT2Q7Z6V5 191 aaKnown RBP12.57□□□□□ -0.4
USF1-203ENST00000368021 KLHL7Q8IXQ5 586 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 RAPGEF5Q92565 580 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 RNF25Q96BH1 459 aaPredicted RBP12.57□□□□□ -0.4
USF1-203ENST00000368021 SAMD11Q96NU1 681 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 PEBP4Q96S96 227 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 PNKPQ96T60 521 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 NPY6RQ99463 290 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 VN1R3Q9BXE9 311 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 LRRC19Q9H756 370 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 ZWILCHQ9H900 591 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 PCSK1NQ9UHG2 260 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 PCYOX1Q9UHG3 505 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 MTCH2Q9Y6C9 303 aa12.57□□□□□ -0.4
USF1-203ENST00000368021 MUC3AQ02505 3323 aa12.56□□□□□ -0.4
USF1-203ENST00000368021 hCG_1818297A0A087WSY0 165 aa12.56□□□□□ -0.4
USF1-203ENST00000368021 TCRBV7S2A1N4TA0A589 114 aa12.56□□□□□ -0.4
USF1-203ENST00000368021 MTMR11A4FU01 709 aa12.56□□□□□ -0.4
USF1-203ENST00000368021 A6NNZ2 444 aa12.56□□□□□ -0.4
USF1-203ENST00000368021 H0YHG0 523 aa12.56□□□□□ -0.4
USF1-203ENST00000368021 RAD51CO43502 376 aa12.56□□□□□ -0.4
USF1-203ENST00000368021 FGF18O76093 207 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms