RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 PHTF2Q8N3S3 785 aa20.46■□□□□ 0.87
ITGA4-202ENST00000339307 FBXL13Q8NEE6 735 aa20.46■□□□□ 0.87
ITGA4-202ENST00000339307 TSG101Q99816 390 aa20.46■□□□□ 0.87
ITGA4-202ENST00000339307 PNPLA8Q9NP80 782 aa20.46■□□□□ 0.87
ITGA4-202ENST00000339307 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.46■□□□□ 0.87
ITGA4-202ENST00000339307 RMND1Q9NWS8 449 aa20.46■□□□□ 0.87
ITGA4-202ENST00000339307 RAB20Q9NX57 234 aa20.46■□□□□ 0.87
ITGA4-202ENST00000339307 WDR35Q9P2L0 1181 aa20.46■□□□□ 0.87
ITGA4-202ENST00000339307 PATE3B3GLJ2 98 aa20.45■□□□□ 0.86
ITGA4-202ENST00000339307 HOXB2P14652 356 aa20.45■□□□□ 0.86
ITGA4-202ENST00000339307 KIF11P52732 1056 aa20.45■□□□□ 0.86
ITGA4-202ENST00000339307 ZCWPW2Q504Y3 356 aa20.45■□□□□ 0.86
ITGA4-202ENST00000339307 CHPFQ8IZ52 775 aa20.45■□□□□ 0.86
ITGA4-202ENST00000339307 TMEM176AQ96HP8 235 aa20.45■□□□□ 0.86
ITGA4-202ENST00000339307 CISHQ9NSE2 258 aa20.45■□□□□ 0.86
ITGA4-202ENST00000339307 PLK2Q9NYY3 685 aa20.45■□□□□ 0.86
ITGA4-202ENST00000339307 RASAL2Q9UJF2 1139 aa20.45■□□□□ 0.86
ITGA4-202ENST00000339307 P2RY2P41231 377 aa20.44■□□□□ 0.86
ITGA4-202ENST00000339307 PSEN1P49768 467 aa20.44■□□□□ 0.86
ITGA4-202ENST00000339307 SLC8A3P57103 927 aa20.44■□□□□ 0.86
ITGA4-202ENST00000339307 ENPEPQ07075 957 aa20.44■□□□□ 0.86
ITGA4-202ENST00000339307 EFEMP1Q12805 493 aa20.44■□□□□ 0.86
ITGA4-202ENST00000339307 N4BP2L1Q5TBK1 243 aaPredicted RBP20.44■□□□□ 0.86
ITGA4-202ENST00000339307 DAB2IPQ5VWQ8 1189 aa20.44■□□□□ 0.86
ITGA4-202ENST00000339307 EGFLAMQ63HQ2 1017 aa20.44■□□□□ 0.86
ITGA4-202ENST00000339307 DEFB119Q8N690 84 aa20.44■□□□□ 0.86
ITGA4-202ENST00000339307 OLIG1Q8TAK6 271 aa20.44■□□□□ 0.86
ITGA4-202ENST00000339307 KCNV2Q8TDN2 545 aa20.44■□□□□ 0.86
ITGA4-202ENST00000339307 TATDN2Q93075 761 aa20.44■□□□□ 0.86
ITGA4-202ENST00000339307 LNP1A1A4G5 178 aa20.44■□□□□ 0.86
ITGA4-202ENST00000339307 TM4SF5O14894 197 aa20.44■□□□□ 0.86
ITGA4-202ENST00000339307 NTSR1P30989 418 aa20.44■□□□□ 0.86
ITGA4-202ENST00000339307 PRCPP42785 496 aa20.44■□□□□ 0.86
ITGA4-202ENST00000339307 DGKGP49619 791 aa20.44■□□□□ 0.86
ITGA4-202ENST00000339307 UAP1L1Q3KQV9 507 aa20.44■□□□□ 0.86
ITGA4-202ENST00000339307 RSRC2Q7L4I2 434 aaKnown RBP20.44■□□□□ 0.86
ITGA4-202ENST00000339307 CCDC186Q7Z3E2 898 aa20.44■□□□□ 0.86
ITGA4-202ENST00000339307 SCD5Q86SK9 330 aa20.44■□□□□ 0.86
ITGA4-202ENST00000339307 TTC39CQ8N584 583 aa20.44■□□□□ 0.86
ITGA4-202ENST00000339307 ARID3AQ99856 593 aa20.44■□□□□ 0.86
ITGA4-202ENST00000339307 DUSP9Q99956 384 aaKnown RBP20.44■□□□□ 0.86
ITGA4-202ENST00000339307 LSM14BQ9BX40 385 aaKnown RBP20.44■□□□□ 0.86
ITGA4-202ENST00000339307 CACNG3O60359 315 aa20.43■□□□□ 0.86
ITGA4-202ENST00000339307 GREM1O60565 184 aa20.43■□□□□ 0.86
ITGA4-202ENST00000339307 KCNK5O95279 499 aa20.43■□□□□ 0.86
ITGA4-202ENST00000339307 IRX4P78413 519 aa20.43■□□□□ 0.86
ITGA4-202ENST00000339307 PSAPL1Q6NUJ1 521 aa20.43■□□□□ 0.86
ITGA4-202ENST00000339307 KLHDC10Q6PID8 442 aa20.43■□□□□ 0.86
ITGA4-202ENST00000339307 TOGARAM2Q6ZUX3 1019 aa20.43■□□□□ 0.86
ITGA4-202ENST00000339307 SLC4A11Q8NBS3 891 aa20.43■□□□□ 0.86
ITGA4-202ENST00000339307 ERCC4Q92889 916 aaPredicted RBP20.43■□□□□ 0.86
ITGA4-202ENST00000339307 CDK5RAP1Q96SZ6 601 aaKnown RBP20.43■□□□□ 0.86
ITGA4-202ENST00000339307 ACOX2Q99424 681 aa20.43■□□□□ 0.86
ITGA4-202ENST00000339307 TMEM9BQ9NQ34 198 aa20.43■□□□□ 0.86
ITGA4-202ENST00000339307 MBD1Q9UIS9 605 aaPredicted RBP20.43■□□□□ 0.86
ITGA4-202ENST00000339307 ATXN2Q99700 1313 aaKnown RBP20.42■□□□□ 0.86
ITGA4-202ENST00000339307 NUP205Q92621 2012 aa20.42■□□□□ 0.86
ITGA4-202ENST00000339307 STC2O76061 302 aa20.42■□□□□ 0.86
ITGA4-202ENST00000339307 SMC2O95347 1197 aa20.42■□□□□ 0.86
ITGA4-202ENST00000339307 CHRM1P11229 460 aaPredicted RBP20.42■□□□□ 0.86
ITGA4-202ENST00000339307 GABRG2P18507 467 aa20.42■□□□□ 0.86
ITGA4-202ENST00000339307 PTGER3P43115 390 aa20.42■□□□□ 0.86
ITGA4-202ENST00000339307 RAD23BP54727 409 aa20.42■□□□□ 0.86
ITGA4-202ENST00000339307 COG7P83436 770 aa20.42■□□□□ 0.86
ITGA4-202ENST00000339307 RPL6Q02878 288 aaKnown RBP20.42■□□□□ 0.86
ITGA4-202ENST00000339307 LRMPQ12912 555 aa20.42■□□□□ 0.86
ITGA4-202ENST00000339307 TRIM61Q5EBN2 209 aa20.42■□□□□ 0.86
ITGA4-202ENST00000339307 ZNF658Q5TYW1 1059 aaPredicted RBP20.42■□□□□ 0.86
ITGA4-202ENST00000339307 NUSAP1Q9BXS6 441 aaKnown RBP20.42■□□□□ 0.86
ITGA4-202ENST00000339307 RAD54BQ9Y620 910 aa20.42■□□□□ 0.86
ITGA4-202ENST00000339307 PRRT4C9JH25 899 aa20.41■□□□□ 0.86
ITGA4-202ENST00000339307 NOVA1P51513 510 aaKnown RBP20.41■□□□□ 0.86
ITGA4-202ENST00000339307 GOLGA7BQ2TAP0 167 aa20.41■□□□□ 0.86
ITGA4-202ENST00000339307 MAP7D1Q3KQU3 841 aa20.41■□□□□ 0.86
ITGA4-202ENST00000339307 CBWD6Q4V339 395 aa20.41■□□□□ 0.86
ITGA4-202ENST00000339307 CBWD3Q5JTY5 395 aa20.41■□□□□ 0.86
ITGA4-202ENST00000339307 CBWD5Q5RIA9 395 aa20.41■□□□□ 0.86
ITGA4-202ENST00000339307 LYSMD4Q5XG99 296 aa20.41■□□□□ 0.86
ITGA4-202ENST00000339307 ANKRD40Q6AI12 368 aa20.41■□□□□ 0.86
ITGA4-202ENST00000339307 PIGZQ86VD9 579 aa20.41■□□□□ 0.86
ITGA4-202ENST00000339307 FMR1NBQ8N0W7 255 aaPredicted RBP20.41■□□□□ 0.86
ITGA4-202ENST00000339307 ARHGAP18Q8N392 663 aa20.41■□□□□ 0.86
ITGA4-202ENST00000339307 SMARCE1Q969G3 411 aa20.41■□□□□ 0.86
ITGA4-202ENST00000339307 CLIC5Q9NZA1 410 aa20.41■□□□□ 0.86
ITGA4-202ENST00000339307 MARK1Q9P0L2 795 aa20.41■□□□□ 0.86
ITGA4-202ENST00000339307 CALCOCO1Q9P1Z2 691 aa20.41■□□□□ 0.86
ITGA4-202ENST00000339307 ANGPTL2Q9UKU9 493 aa20.41■□□□□ 0.86
ITGA4-202ENST00000339307 HCN2Q9UL51 889 aa20.41■□□□□ 0.86
ITGA4-202ENST00000339307 STRIP2Q9ULQ0 834 aa20.41■□□□□ 0.86
ITGA4-202ENST00000339307 ZNF510Q9Y2H8 683 aa20.41■□□□□ 0.86
ITGA4-202ENST00000339307 STARD13Q9Y3M8 1113 aa20.41■□□□□ 0.86
ITGA4-202ENST00000339307 USP3Q9Y6I4 520 aa20.41■□□□□ 0.86
ITGA4-202ENST00000339307 MYO18AQ92614 2054 aaKnown RBP20.4■□□□□ 0.86
ITGA4-202ENST00000339307 CFIP05156 583 aa20.4■□□□□ 0.86
ITGA4-202ENST00000339307 CD19P15391 556 aa20.4■□□□□ 0.86
ITGA4-202ENST00000339307 CORO1AP31146 461 aaKnown RBP20.4■□□□□ 0.86
ITGA4-202ENST00000339307 MAPK8P45983 427 aa20.4■□□□□ 0.86
ITGA4-202ENST00000339307 TKTL1P51854 596 aa20.4■□□□□ 0.86
ITGA4-202ENST00000339307 YWHAGP61981 247 aaKnown RBP eCLIP20.4■□□□□ 0.86
ITGA4-202ENST00000339307 FKBP3Q00688 224 aaKnown RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms