RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 AMIGO2Q86SJ2 522 aa16.57■□□□□ 0.24
NPHP3-201ENST00000337331 DDIASQ8IXT1 998 aa16.57■□□□□ 0.24
NPHP3-201ENST00000337331 VGLL2Q8N8G2 317 aa16.57■□□□□ 0.24
NPHP3-201ENST00000337331 PHC3Q8NDX5 983 aa16.57■□□□□ 0.24
NPHP3-201ENST00000337331 ART4Q93070 314 aa16.57■□□□□ 0.24
NPHP3-201ENST00000337331 BORCS6Q96GS4 357 aa16.57■□□□□ 0.24
NPHP3-201ENST00000337331 C12orf65Q9H3J6 166 aaKnown RBP16.57■□□□□ 0.24
NPHP3-201ENST00000337331 PLEKHA5Q9HAU0 1116 aa16.57■□□□□ 0.24
NPHP3-201ENST00000337331 PRDM16Q9HAZ2 1276 aa16.57■□□□□ 0.24
NPHP3-201ENST00000337331 TRPC7Q9HCX4 862 aa16.57■□□□□ 0.24
NPHP3-201ENST00000337331 TAF4O00268 1085 aa16.57■□□□□ 0.24
NPHP3-201ENST00000337331 CNOT3O75175 753 aaKnown RBP16.57■□□□□ 0.24
NPHP3-201ENST00000337331 HALP42357 657 aa16.57■□□□□ 0.24
NPHP3-201ENST00000337331 USP10Q14694 798 aaKnown RBP16.57■□□□□ 0.24
NPHP3-201ENST00000337331 PDCD4Q53EL6 469 aaKnown RBP16.57■□□□□ 0.24
NPHP3-201ENST00000337331 AFG1LQ8WV93 481 aa16.57■□□□□ 0.24
NPHP3-201ENST00000337331 RMND5BQ96G75 393 aaPredicted RBP16.57■□□□□ 0.24
NPHP3-201ENST00000337331 ZDHHC15Q96MV8 337 aa16.57■□□□□ 0.24
NPHP3-201ENST00000337331 GPATCH1Q9BRR8 931 aaKnown RBP16.57■□□□□ 0.24
NPHP3-201ENST00000337331 DNAJC18Q9H819 358 aa16.57■□□□□ 0.24
NPHP3-201ENST00000337331 SEPT3Q9UH03 358 aa16.57■□□□□ 0.24
NPHP3-201ENST00000337331 AURKCQ9UQB9 309 aa16.57■□□□□ 0.24
NPHP3-201ENST00000337331 KPNA4O00629 521 aaPredicted RBP16.56■□□□□ 0.24
NPHP3-201ENST00000337331 GPD1P21695 349 aa16.56■□□□□ 0.24
NPHP3-201ENST00000337331 MRPS22P82650 360 aaKnown RBP16.56■□□□□ 0.24
NPHP3-201ENST00000337331 LRRC8EQ6NSJ5 796 aa16.56■□□□□ 0.24
NPHP3-201ENST00000337331 XRRA1Q6P2D8 792 aa16.56■□□□□ 0.24
NPHP3-201ENST00000337331 C20orf96Q9NUD7 363 aaPredicted RBP16.56■□□□□ 0.24
NPHP3-201ENST00000337331 TMED5Q9Y3A6 229 aa16.56■□□□□ 0.24
NPHP3-201ENST00000337331 UBR1Q8IWV7 1749 aa16.56■□□□□ 0.24
NPHP3-201ENST00000337331 A0A1W2PPM1 405 aa16.56■□□□□ 0.24
NPHP3-201ENST00000337331 TFPTP0C1Z6 253 aa16.56■□□□□ 0.24
NPHP3-201ENST00000337331 GM2AP17900 193 aa16.56■□□□□ 0.24
NPHP3-201ENST00000337331 HSPA13P48723 471 aa16.56■□□□□ 0.24
NPHP3-201ENST00000337331 WDR4P57081 412 aaKnown RBP16.56■□□□□ 0.24
NPHP3-201ENST00000337331 ANGEL2Q5VTE6 544 aaKnown RBP16.56■□□□□ 0.24
NPHP3-201ENST00000337331 TTC7BQ86TV6 843 aa16.56■□□□□ 0.24
NPHP3-201ENST00000337331 ZFYVE19Q96K21 471 aa16.56■□□□□ 0.24
NPHP3-201ENST00000337331 TSR3Q9UJK0 312 aaKnown RBP16.56■□□□□ 0.24
NPHP3-201ENST00000337331 RBAK-RBAKDNI3L0D1 243 aa16.56■□□□□ 0.24
NPHP3-201ENST00000337331 AKAP10O43572 662 aa16.56■□□□□ 0.24
NPHP3-201ENST00000337331 RNASEH1O60930 286 aaKnown RBP16.56■□□□□ 0.24
NPHP3-201ENST00000337331 SLC5A3P53794 718 aa16.56■□□□□ 0.24
NPHP3-201ENST00000337331 EFCAB12Q6NXP0 572 aa16.56■□□□□ 0.24
NPHP3-201ENST00000337331 FASTKD5Q7L8L6 764 aaKnown RBP16.56■□□□□ 0.24
NPHP3-201ENST00000337331 RASGEF1CQ8N431 466 aa16.56■□□□□ 0.24
NPHP3-201ENST00000337331 HPDLQ96IR7 371 aa16.56■□□□□ 0.24
NPHP3-201ENST00000337331 PAFAH2Q99487 392 aa16.56■□□□□ 0.24
NPHP3-201ENST00000337331 LRRC4BQ9NT99 713 aa16.56■□□□□ 0.24
NPHP3-201ENST00000337331 TRIM64CA6NLI5 447 aa16.56■□□□□ 0.24
NPHP3-201ENST00000337331 ECHS1P30084 290 aa16.56■□□□□ 0.24
NPHP3-201ENST00000337331 DCAF6Q58WW2 860 aa16.56■□□□□ 0.24
NPHP3-201ENST00000337331 APPL2Q8NEU8 664 aa16.56■□□□□ 0.24
NPHP3-201ENST00000337331 RDM1Q8NG50 284 aa16.56■□□□□ 0.24
NPHP3-201ENST00000337331 UTP4Q969X6 686 aaKnown RBP16.56■□□□□ 0.24
NPHP3-201ENST00000337331 ZDHHC18Q9NUE0 388 aa16.56■□□□□ 0.24
NPHP3-201ENST00000337331 PRMT7Q9NVM4 692 aaPredicted RBP16.56■□□□□ 0.24
NPHP3-201ENST00000337331 GRID1Q9ULK0 1009 aa16.56■□□□□ 0.24
NPHP3-201ENST00000337331 KLHL41O60662 606 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 STIP1P31948 543 aaKnown RBP16.55■□□□□ 0.24
NPHP3-201ENST00000337331 CAP2P40123 477 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 DLG1Q12959 904 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 ORC1Q13415 861 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 BOLA3Q53S33 107 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 SAMD7Q7Z3H4 446 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 GPRASP2Q96D09 838 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 GMCL1Q96IK5 515 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 PCYOX1Q9UHG3 505 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 SNX13Q9Y5W8 968 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 E5RI56 91 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 NFIBO00712 420 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 MAGEB2O15479 319 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 DYNC1LI2O43237 492 aaPredicted RBP16.55■□□□□ 0.24
NPHP3-201ENST00000337331 SSTR1P30872 391 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 MYBPC2Q14324 1141 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 ZNF618Q5T7W0 954 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 SCAIQ8N9R8 606 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 TMEM109Q9BVC6 243 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 TASP1Q9H6P5 420 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 TMEM59LQ9UK28 342 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 MYRFQ9Y2G1 1151 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 TTLL13PA6NNM8 815 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 ANKRD63C9JTQ0 380 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 H3BSA7 217 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 MFN2O95140 757 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 ITGB3P05106 788 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 SPRP35270 261 aaPredicted RBP16.55■□□□□ 0.24
NPHP3-201ENST00000337331 ZDHHC24Q6UX98 284 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 TRABD2AQ86V40 505 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 SMYD1Q8NB12 490 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 ZNF669Q96BR6 464 aaPredicted RBP16.55■□□□□ 0.24
NPHP3-201ENST00000337331 RMDN1Q96DB5 314 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 CORO1BQ9BR76 489 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 MTMR12Q9C0I1 747 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 S100A14Q9HCY8 104 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 PPM1HQ9ULR3 514 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 NWD1Q149M9 1564 aa16.55■□□□□ 0.24
NPHP3-201ENST00000337331 OGTO15294 1046 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 PSTPIP1O43586 416 aa16.54■□□□□ 0.24
NPHP3-201ENST00000337331 TPST1O60507 370 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms