RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 MMRN1Q13201 1228 aa18.89■□□□□ 0.61
VIM-201ENST00000224237 OASLQ15646 514 aaKnown RBP18.89■□□□□ 0.61
VIM-201ENST00000224237 ANKS3Q6ZW76 656 aa18.89■□□□□ 0.61
VIM-201ENST00000224237 FAM131BQ86XD5 332 aa18.89■□□□□ 0.61
VIM-201ENST00000224237 CCDC89Q8N998 374 aa18.89■□□□□ 0.61
VIM-201ENST00000224237 SLC35B2Q8TB61 432 aa18.89■□□□□ 0.61
VIM-201ENST00000224237 ACTL9Q8TC94 416 aa18.89■□□□□ 0.61
VIM-201ENST00000224237 PGAP3Q96FM1 320 aaPredicted RBP18.89■□□□□ 0.61
VIM-201ENST00000224237 RNF157Q96PX1 679 aa18.89■□□□□ 0.61
VIM-201ENST00000224237 GRHL1Q9NZI5 618 aa18.89■□□□□ 0.61
VIM-201ENST00000224237 ZNF148Q9UQR1 794 aa18.89■□□□□ 0.61
VIM-201ENST00000224237 LAMA2P24043 3122 aaKnown RBP18.89■□□□□ 0.61
VIM-201ENST00000224237 ITGAVP06756 1048 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 DEUP1Q05D60 604 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 SMARCB1Q12824 385 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 GPS2Q13227 327 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 CA9Q16790 459 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 MFSD5Q6N075 450 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 BEND5Q7L4P6 421 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 GSTA5Q7RTV2 222 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 TMEM199Q8N511 208 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 CCDC185Q8N715 623 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 CCHCR1Q8TD31 782 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 FAF2Q96CS3 445 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 TTPALQ9BTX7 342 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 DHX35Q9H5Z1 703 aaKnown RBP18.88■□□□□ 0.61
VIM-201ENST00000224237 CWH43Q9H720 699 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 ZDHHC18Q9NUE0 388 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 WHRNQ9P202 907 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 NEU2Q9Y3R4 380 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 TNFRSF10BO14763 440 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 IL4RP24394 825 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 L1CAMP32004 1257 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 MAGEA11P43364 429 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 AIF1P55008 147 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 PITX1P78337 314 aaPredicted RBP18.88■□□□□ 0.61
VIM-201ENST00000224237 CALCOCO2Q13137 446 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 ANKRD20A8PQ5CZ79 823 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 PPP6R3Q5H9R7 873 aaPredicted RBP18.88■□□□□ 0.61
VIM-201ENST00000224237 RTP2Q5QGT7 225 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 UBE2Q1Q7Z7E8 422 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 SCN4BQ8IWT1 228 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 SLC7A14Q8TBB6 771 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 LRRC45Q96CN5 670 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 C8orf48Q96LL4 319 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 SLC9A7Q96T83 725 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 FZD10Q9ULW2 581 aa18.88■□□□□ 0.61
VIM-201ENST00000224237 TBC1D4O60343 1298 aa18.87■□□□□ 0.61
VIM-201ENST00000224237 CPB1P15086 417 aa18.87■□□□□ 0.61
VIM-201ENST00000224237 PLTPP55058 493 aa18.87■□□□□ 0.61
VIM-201ENST00000224237 NME3Q13232 169 aa18.87■□□□□ 0.61
VIM-201ENST00000224237 BSPRYQ5W0U4 402 aa18.87■□□□□ 0.61
VIM-201ENST00000224237 ZDHHC24Q6UX98 284 aa18.87■□□□□ 0.61
VIM-201ENST00000224237 TAS1R1Q7RTX1 841 aa18.87■□□□□ 0.61
VIM-201ENST00000224237 ALLCQ8N6M5 410 aa18.87■□□□□ 0.61
VIM-201ENST00000224237 SCAMP5Q8TAC9 235 aa18.87■□□□□ 0.61
VIM-201ENST00000224237 FBXO25Q8TCJ0 367 aa18.87■□□□□ 0.61
VIM-201ENST00000224237 ZNF689Q96CS4 500 aaPredicted RBP18.87■□□□□ 0.61
VIM-201ENST00000224237 SNF8Q96H20 258 aa18.87■□□□□ 0.61
VIM-201ENST00000224237 ALPK3Q96L96 1907 aa18.87■□□□□ 0.61
VIM-201ENST00000224237 SYNJ2BP-COX16A0A087WUM0 186 aa18.86■□□□□ 0.61
VIM-201ENST00000224237 APOL1O14791 398 aa18.86■□□□□ 0.61
VIM-201ENST00000224237 MCF2LO15068 1137 aa18.86■□□□□ 0.61
VIM-201ENST00000224237 F9P00740 461 aa18.86■□□□□ 0.61
VIM-201ENST00000224237 ATF2P15336 505 aa18.86■□□□□ 0.61
VIM-201ENST00000224237 TGM2P21980 687 aa18.86■□□□□ 0.61
VIM-201ENST00000224237 HSPA9P38646 679 aaKnown RBP18.86■□□□□ 0.61
VIM-201ENST00000224237 WDR5P61964 334 aaKnown RBP18.86■□□□□ 0.61
VIM-201ENST00000224237 GPR17Q13304 367 aa18.86■□□□□ 0.61
VIM-201ENST00000224237 SLC9A4Q6AI14 798 aa18.86■□□□□ 0.61
VIM-201ENST00000224237 SPPL2BQ8TCT7 592 aa18.86■□□□□ 0.61
VIM-201ENST00000224237 P3H4Q92791 437 aa18.86■□□□□ 0.61
VIM-201ENST00000224237 PGLYRP2Q96PD5 576 aa18.86■□□□□ 0.61
VIM-201ENST00000224237 PIGVQ9NUD9 493 aa18.86■□□□□ 0.61
VIM-201ENST00000224237 MTMR10Q9NXD2 777 aa18.86■□□□□ 0.61
VIM-201ENST00000224237 COX16Q9P0S2 106 aa18.86■□□□□ 0.61
VIM-201ENST00000224237 RCOR3Q9P2K3 495 aaPredicted RBP18.86■□□□□ 0.61
VIM-201ENST00000224237 SAE1Q9UBE0 346 aaPredicted RBP18.86■□□□□ 0.61
VIM-201ENST00000224237 MTRF1LQ9UGC7 380 aaKnown RBP18.86■□□□□ 0.61
VIM-201ENST00000224237 BAIAP3O94812 1187 aa18.86■□□□□ 0.61
VIM-201ENST00000224237 EFEMP2O95967 443 aa18.86■□□□□ 0.61
VIM-201ENST00000224237 KRT14P02533 472 aa18.86■□□□□ 0.61
VIM-201ENST00000224237 ITIH2P19823 946 aa18.86■□□□□ 0.61
VIM-201ENST00000224237 KLRC2P26717 231 aa18.86■□□□□ 0.61
VIM-201ENST00000224237 TRIP13Q15645 432 aaPredicted RBP18.86■□□□□ 0.61
VIM-201ENST00000224237 USP41Q3LFD5 358 aa18.86■□□□□ 0.61
VIM-201ENST00000224237 OTOP2Q7RTS6 562 aa18.86■□□□□ 0.61
VIM-201ENST00000224237 NUP93Q8N1F7 819 aa18.86■□□□□ 0.61
VIM-201ENST00000224237 PCDH19Q8TAB3 1148 aa18.86■□□□□ 0.61
VIM-201ENST00000224237 C2orf15Q8WU43 125 aaKnown RBP18.86■□□□□ 0.61
VIM-201ENST00000224237 EDEM1Q92611 657 aa18.86■□□□□ 0.61
VIM-201ENST00000224237 ART4Q93070 314 aa18.86■□□□□ 0.61
VIM-201ENST00000224237 NTAN1Q96AB6 310 aa18.86■□□□□ 0.61
VIM-201ENST00000224237 IGSF21Q96ID5 467 aa18.86■□□□□ 0.61
VIM-201ENST00000224237 KCTD15Q96SI1 283 aaPredicted RBP18.86■□□□□ 0.61
VIM-201ENST00000224237 RC3H2Q9HBD1 1191 aaKnown RBP18.86■□□□□ 0.61
VIM-201ENST00000224237 ABCC13Q9NSE7 274 aa18.86■□□□□ 0.61
VIM-201ENST00000224237 DDIT4Q9NX09 232 aa18.86■□□□□ 0.61
VIM-201ENST00000224237 PECAM1P16284 738 aaPredicted RBP18.85■□□□□ 0.61
VIM-201ENST00000224237 ZFXP17010 805 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms