RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 PARD6AQ9NPB6 346 aa18.05■□□□□ 0.48
PHGDH-234ENST00000642041 SLC2A4RGQ9NR83 387 aa18.05■□□□□ 0.48
PHGDH-234ENST00000642041 SPATA6Q9NWH7 488 aaPredicted RBP18.05■□□□□ 0.48
PHGDH-234ENST00000642041 ZSCAN32Q9NX65 697 aa18.05■□□□□ 0.48
PHGDH-234ENST00000642041 TMEM59LQ9UK28 342 aa18.05■□□□□ 0.48
PHGDH-234ENST00000642041 FRYQ5TBA9 3013 aa18.05■□□□□ 0.48
PHGDH-234ENST00000642041 MIA3Q5JRA6 1907 aa18.04■□□□□ 0.48
PHGDH-234ENST00000642041 TMEM191CA6NGB0 347 aa18.04■□□□□ 0.48
PHGDH-234ENST00000642041 NDC80O14777 642 aa18.04■□□□□ 0.48
PHGDH-234ENST00000642041 DDX3YO15523 660 aaKnown RBP18.04■□□□□ 0.48
PHGDH-234ENST00000642041 KRT3P12035 628 aa18.04■□□□□ 0.48
PHGDH-234ENST00000642041 TNFRSF8P28908 595 aa18.04■□□□□ 0.48
PHGDH-234ENST00000642041 PCSK1P29120 753 aa18.04■□□□□ 0.48
PHGDH-234ENST00000642041 CSTF1Q05048 431 aaKnown RBP18.04■□□□□ 0.48
PHGDH-234ENST00000642041 MAPRE1Q15691 268 aaKnown RBP18.04■□□□□ 0.48
PHGDH-234ENST00000642041 GLB1LQ6UWU2 654 aa18.04■□□□□ 0.48
PHGDH-234ENST00000642041 POLNQ7Z5Q5 900 aa18.04■□□□□ 0.48
PHGDH-234ENST00000642041 URGCPQ8TCY9 931 aa18.04■□□□□ 0.48
PHGDH-234ENST00000642041 NETO1Q8TDF5 533 aa18.04■□□□□ 0.48
PHGDH-234ENST00000642041 CD101Q93033 1021 aa18.04■□□□□ 0.48
PHGDH-234ENST00000642041 SHDQ96IW2 340 aa18.04■□□□□ 0.48
PHGDH-234ENST00000642041 RBM41Q96IZ5 413 aaKnown RBP18.04■□□□□ 0.48
PHGDH-234ENST00000642041 MRPL9Q9BYD2 267 aaKnown RBP18.04■□□□□ 0.48
PHGDH-234ENST00000642041 ELOVL4Q9GZR5 314 aa18.04■□□□□ 0.48
PHGDH-234ENST00000642041 RNF39Q9H2S5 420 aa18.04■□□□□ 0.48
PHGDH-234ENST00000642041 SMYD3Q9H7B4 428 aa18.04■□□□□ 0.48
PHGDH-234ENST00000642041 WDR6Q9NNW5 1121 aaKnown RBP18.04■□□□□ 0.48
PHGDH-234ENST00000642041 ACP6Q9NPH0 428 aa18.04■□□□□ 0.48
PHGDH-234ENST00000642041 ANGPTL2Q9UKU9 493 aa18.04■□□□□ 0.48
PHGDH-234ENST00000642041 EFR3BQ9Y2G0 817 aa18.04■□□□□ 0.48
PHGDH-234ENST00000642041 CEP295Q9C0D2 2601 aa18.04■□□□□ 0.48
PHGDH-234ENST00000642041 KRIT1O00522 736 aa18.03■□□□□ 0.48
PHGDH-234ENST00000642041 ZZEF1O43149 2961 aa18.03■□□□□ 0.48
PHGDH-234ENST00000642041 RNF8O76064 485 aa18.03■□□□□ 0.48
PHGDH-234ENST00000642041 KRT7P08729 469 aa18.03■□□□□ 0.48
PHGDH-234ENST00000642041 MLH1P40692 756 aa18.03■□□□□ 0.48
PHGDH-234ENST00000642041 GPD2P43304 727 aa18.03■□□□□ 0.48
PHGDH-234ENST00000642041 CLCN4P51793 760 aa18.03■□□□□ 0.48
PHGDH-234ENST00000642041 BCAT1P54687 386 aa18.03■□□□□ 0.48
PHGDH-234ENST00000642041 TUSC3Q13454 348 aa18.03■□□□□ 0.48
PHGDH-234ENST00000642041 DHX34Q14147 1143 aaKnown RBP18.03■□□□□ 0.48
PHGDH-234ENST00000642041 LONRF2Q1L5Z9 754 aa18.03■□□□□ 0.48
PHGDH-234ENST00000642041 AGMOQ6ZNB7 445 aa18.03■□□□□ 0.48
PHGDH-234ENST00000642041 MMS22LQ6ZRQ5 1243 aa18.03■□□□□ 0.48
PHGDH-234ENST00000642041 RCOR2Q8IZ40 523 aa18.03■□□□□ 0.48
PHGDH-234ENST00000642041 ANKRD52Q8NB46 1076 aa18.03■□□□□ 0.48
PHGDH-234ENST00000642041 NELL1Q92832 810 aa18.03■□□□□ 0.48
PHGDH-234ENST00000642041 C18orf25Q96B23 403 aaPredicted RBP18.03■□□□□ 0.48
PHGDH-234ENST00000642041 MYADMQ96S97 322 aa18.03■□□□□ 0.48
PHGDH-234ENST00000642041 RHOBTB2Q9BYZ6 727 aa18.03■□□□□ 0.48
PHGDH-234ENST00000642041 UBXN6Q9BZV1 441 aa18.03■□□□□ 0.48
PHGDH-234ENST00000642041 ASNSD1Q9NWL6 643 aa18.03■□□□□ 0.48
PHGDH-234ENST00000642041 KLK14Q9P0G3 267 aa18.03■□□□□ 0.48
PHGDH-234ENST00000642041 RASAL2Q9UJF2 1139 aa18.03■□□□□ 0.48
PHGDH-234ENST00000642041 GMEB2Q9UKD1 530 aa18.03■□□□□ 0.48
PHGDH-234ENST00000642041 FAM187AA6NFU0 413 aa18.02■□□□□ 0.48
PHGDH-234ENST00000642041 ARL5CA6NH57 179 aa18.02■□□□□ 0.48
PHGDH-234ENST00000642041 M0QYV0 167 aa18.02■□□□□ 0.48
PHGDH-234ENST00000642041 PODXLO00592 558 aa18.02■□□□□ 0.48
PHGDH-234ENST00000642041 ZNF185O15231 689 aa18.02■□□□□ 0.48
PHGDH-234ENST00000642041 SART1O43290 800 aaKnown RBP18.02■□□□□ 0.48
PHGDH-234ENST00000642041 TRAPPC3O43617 180 aa18.02■□□□□ 0.48
PHGDH-234ENST00000642041 MICAL2O94851 1124 aa18.02■□□□□ 0.48
PHGDH-234ENST00000642041 CHRNA3P32297 505 aa18.02■□□□□ 0.48
PHGDH-234ENST00000642041 CXCR5P32302 372 aa18.02■□□□□ 0.48
PHGDH-234ENST00000642041 PEX5P50542 639 aa18.02■□□□□ 0.48
PHGDH-234ENST00000642041 CDH8P55286 799 aa18.02■□□□□ 0.48
PHGDH-234ENST00000642041 GLRA4Q5JXX5 417 aa18.02■□□□□ 0.48
PHGDH-234ENST00000642041 TMEM173Q86WV6 379 aaPredicted RBP18.02■□□□□ 0.48
PHGDH-234ENST00000642041 KATNAL2Q8IYT4 538 aa18.02■□□□□ 0.48
PHGDH-234ENST00000642041 EXD1Q8NHP7 514 aa18.02■□□□□ 0.48
PHGDH-234ENST00000642041 TFAP2BQ92481 460 aa18.02■□□□□ 0.48
PHGDH-234ENST00000642041 LPPQ93052 612 aa18.02■□□□□ 0.48
PHGDH-234ENST00000642041 MCRS1Q96EZ8 462 aa18.02■□□□□ 0.48
PHGDH-234ENST00000642041 IGSF21Q96ID5 467 aa18.02■□□□□ 0.48
PHGDH-234ENST00000642041 GAD1Q99259 594 aa18.02■□□□□ 0.48
PHGDH-234ENST00000642041 EMILIN2Q9BXX0 1053 aa18.02■□□□□ 0.48
PHGDH-234ENST00000642041 FRMD8P1Q9BZ68 369 aaPredicted RBP18.02■□□□□ 0.48
PHGDH-234ENST00000642041 RAB17Q9H0T7 212 aa18.02■□□□□ 0.48
PHGDH-234ENST00000642041 SDCBP2Q9H190 292 aa18.02■□□□□ 0.48
PHGDH-234ENST00000642041 STIM2Q9P246 746 aa18.02■□□□□ 0.48
PHGDH-234ENST00000642041 TUBGCP4Q9UGJ1 667 aa18.02■□□□□ 0.48
PHGDH-234ENST00000642041 TRIP11Q15643 1979 aa18.01■□□□□ 0.47
PHGDH-234ENST00000642041 ZRANB2O95218 330 aaKnown RBP eCLIP18.01■□□□□ 0.47
PHGDH-234ENST00000642041 ODC1P11926 461 aa18.01■□□□□ 0.47
PHGDH-234ENST00000642041 KLRC2P26717 231 aa18.01■□□□□ 0.47
PHGDH-234ENST00000642041 AARSP49588 968 aaKnown RBP eCLIP18.01■□□□□ 0.47
PHGDH-234ENST00000642041 PSMC1P62191 440 aaKnown RBP18.01■□□□□ 0.47
PHGDH-234ENST00000642041 BST2Q10589 180 aaKnown RBP18.01■□□□□ 0.47
PHGDH-234ENST00000642041 CUL1Q13616 776 aa18.01■□□□□ 0.47
PHGDH-234ENST00000642041 SOWAHAQ2M3V2 549 aa18.01■□□□□ 0.47
PHGDH-234ENST00000642041 DSTYKQ6XUX3 929 aa18.01■□□□□ 0.47
PHGDH-234ENST00000642041 SYDE1Q6ZW31 735 aaPredicted RBP18.01■□□□□ 0.47
PHGDH-234ENST00000642041 TMEM110Q86TL2 294 aa18.01■□□□□ 0.47
PHGDH-234ENST00000642041 ADGRF2Q8IZF7 708 aa18.01■□□□□ 0.47
PHGDH-234ENST00000642041 THEM5Q8N1Q8 247 aa18.01■□□□□ 0.47
PHGDH-234ENST00000642041 ZFP42Q96MM3 310 aa18.01■□□□□ 0.47
PHGDH-234ENST00000642041 KLHL5Q96PQ7 755 aa18.01■□□□□ 0.47
PHGDH-234ENST00000642041 HNRNPABQ99729 332 aaKnown RBP18.01■□□□□ 0.47
PHGDH-234ENST00000642041 TRIM62Q9BVG3 475 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms