RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 ADH6P28332 368 aa7.43□□□□□ -1.22
SCAMP1-206ENST00000618166 TNFRSF4P43489 277 aa7.43□□□□□ -1.22
SCAMP1-206ENST00000618166 DMP1Q13316 513 aaPredicted RBP7.43□□□□□ -1.22
SCAMP1-206ENST00000618166 TFDP1Q14186 410 aa7.43□□□□□ -1.22
SCAMP1-206ENST00000618166 MXD4Q14582 209 aaPredicted RBP7.43□□□□□ -1.22
SCAMP1-206ENST00000618166 VEPH1Q14D04 833 aa7.43□□□□□ -1.22
SCAMP1-206ENST00000618166 DHCR24Q15392 516 aa7.43□□□□□ -1.22
SCAMP1-206ENST00000618166 TAF12Q16514 161 aa7.43□□□□□ -1.22
SCAMP1-206ENST00000618166 SDHAF4Q5VUM1 108 aa7.43□□□□□ -1.22
SCAMP1-206ENST00000618166 CWC27Q6UX04 472 aaKnown RBP7.43□□□□□ -1.22
SCAMP1-206ENST00000618166 XKR5Q6UX68 686 aa7.43□□□□□ -1.22
SCAMP1-206ENST00000618166 FILIP1Q7Z7B0 1213 aa7.43□□□□□ -1.22
SCAMP1-206ENST00000618166 CACTIN-AS1Q8N1I8 211 aa7.43□□□□□ -1.22
SCAMP1-206ENST00000618166 NAT16Q8N8M0 369 aa7.43□□□□□ -1.22
SCAMP1-206ENST00000618166 ARL14EPQ8N8R7 260 aaPredicted RBP7.43□□□□□ -1.22
SCAMP1-206ENST00000618166 CADM4Q8NFZ8 388 aa7.43□□□□□ -1.22
SCAMP1-206ENST00000618166 EXOC6Q8TAG9 804 aa7.43□□□□□ -1.22
SCAMP1-206ENST00000618166 SGF29Q96ES7 293 aa7.43□□□□□ -1.22
SCAMP1-206ENST00000618166 CCDC136Q96JN2 1154 aa7.43□□□□□ -1.22
SCAMP1-206ENST00000618166 MTMR9Q96QG7 549 aa7.43□□□□□ -1.22
SCAMP1-206ENST00000618166 ADAMTS1Q9UHI8 967 aa7.43□□□□□ -1.22
SCAMP1-206ENST00000618166 DDX19BQ9UMR2 479 aa7.43□□□□□ -1.22
SCAMP1-206ENST00000618166 MAGED2Q9UNF1 606 aaPredicted RBP7.43□□□□□ -1.22
SCAMP1-206ENST00000618166 SATB2Q9UPW6 733 aa7.43□□□□□ -1.22
SCAMP1-206ENST00000618166 KNL1Q8NG31 2342 aa7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 ZFC3H1O60293 1989 aaKnown RBP7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 TBC1D3BA6NDS4 549 aa7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 WASH3PC4AMC7 463 aa7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 N4BP3O15049 544 aa7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 MTSS1O43312 755 aa7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 CKMP06732 381 aa7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 ITGAVP06756 1048 aa7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 SFTPCP11686 197 aa7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 LIG1P18858 919 aa7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 SDSP20132 328 aa7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 DDX6P26196 483 aaKnown RBP eCLIP7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 NTSR1P30989 418 aa7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 ARL2P36404 184 aa7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 GNAQP50148 359 aa7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 MFAP1P55081 439 aaKnown RBP7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 OSTNP61366 133 aa7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 TGIF1Q15583 401 aa7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 SLC39A12Q504Y0 691 aa7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 XKR9Q5GH70 373 aa7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 C3orf38Q5JPI3 329 aa7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 C10orf76Q5T2E6 689 aa7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 FIGNL1Q6PIW4 674 aa7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 RHBDF2Q6PJF5 856 aa7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 CACUL1Q86Y37 369 aa7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 LSMEM2Q8N112 164 aa7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 RDM1Q8NG50 284 aa7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 OR10T2Q8NGX3 314 aa7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 SAP25Q8TEE9 199 aa7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 HTR3CQ8WXA8 447 aa7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 MRPS31Q92665 395 aaKnown RBP7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 DSCC1Q9BVC3 393 aa7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 NFKBIZQ9BYH8 718 aa7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 C6orf106Q9H6K1 298 aaPredicted RBP7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 GEMIN8Q9NWZ8 242 aaKnown RBP7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 USP36Q9P275 1121 aaKnown RBP7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 OBSL1O75147 1896 aa7.42□□□□□ -1.22
SCAMP1-206ENST00000618166 LRRIQ4A6NIV6 560 aa7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 LAD1O00515 517 aa7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 CSO75390 466 aaKnown RBP7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 CYP21A2P08686 494 aa7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 ATP2B1P20020 1258 aa7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 MARCKSP29966 332 aaPredicted RBP7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 YWHABP31946 246 aaKnown RBP7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 HSPA4P34932 840 aa7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 QARSP47897 775 aaKnown RBP7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 GRIA4P48058 902 aa7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 TPMTP51580 245 aa7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 OXCT1P55809 520 aa7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 RPL10AP62906 217 aaKnown RBP7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 ATP2C1P98194 919 aaPredicted RBP7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 POU5F1BQ06416 359 aa7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 TRDNQ13061 729 aa7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 TMEM132AQ24JP5 1023 aa7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 SGO2Q562F6 1265 aa7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 CDCP2Q5VXM1 449 aa7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 ALKAL1Q6UXT8 129 aa7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 MAMDC2Q7Z304 686 aaPredicted RBP7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 FAM124AQ86V42 546 aa7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 ADGRG2Q8IZP9 1017 aa7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 RILPL2Q969X0 211 aa7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 PRR11Q96HE9 360 aaPredicted RBP7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 FUCA2Q9BTY2 467 aa7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 MKRN2Q9H000 416 aaKnown RBP7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 POLR3FQ9H1D9 316 aaPredicted RBP7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 BARHL2Q9NY43 387 aa7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 GCNT4Q9P109 453 aa7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 TUBGCP4Q9UGJ1 667 aa7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 ZMYM5Q9UJ78 669 aa7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 PCDHGC4Q9Y5F7 938 aa7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 PHLPP2Q6ZVD8 1323 aa7.41□□□□□ -1.22
SCAMP1-206ENST00000618166 TRAV19A0A0A6YYK7 116 aa7.4□□□□□ -1.22
SCAMP1-206ENST00000618166 OR6C75A6NL08 312 aa7.4□□□□□ -1.22
SCAMP1-206ENST00000618166 M0QZQ0 153 aa7.4□□□□□ -1.22
SCAMP1-206ENST00000618166 USP17L7P0C7H9 530 aa7.4□□□□□ -1.22
SCAMP1-206ENST00000618166 CKMT2P17540 419 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms