RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 CAMK2GQ13555 558 aaPredicted RBP4.71□□□□□ -1.66
CHD9-221ENST00000615216 TAF1CQ15572 869 aaPredicted RBP4.71□□□□□ -1.66
CHD9-221ENST00000615216 TRIM71Q2Q1W2 868 aaKnown RBP4.71□□□□□ -1.66
CHD9-221ENST00000615216 PREPLQ4J6C6 727 aaPredicted RBP4.71□□□□□ -1.66
CHD9-221ENST00000615216 SGO1Q5FBB7 561 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 TRIM48Q8IWZ4 208 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 KRT78Q8N1N4 520 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 ZNF786Q8N393 782 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 UBA3Q8TBC4 463 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 UCMAQ8WVF2 138 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 ZNF668Q96K58 619 aaPredicted RBP4.71□□□□□ -1.66
CHD9-221ENST00000615216 TMEM120AQ9BXJ8 343 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 DLGAP2Q9P1A6 1054 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 VANGL2Q9ULK5 521 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 HPSEQ9Y251 543 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 A0A087X1B8 175 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 F8W810 466 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 ITGALP20701 1170 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 HNRNPH1P31943 449 aaKnown RBP4.71□□□□□ -1.66
CHD9-221ENST00000615216 GRK3P35626 688 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 NUP62P37198 522 aaPredicted RBP4.71□□□□□ -1.66
CHD9-221ENST00000615216 RAB27AP51159 221 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 RPL10AP62906 217 aaKnown RBP4.71□□□□□ -1.66
CHD9-221ENST00000615216 ERVK-24P63145 666 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 C1DQ13901 141 aaKnown RBP4.71□□□□□ -1.66
CHD9-221ENST00000615216 GIT2Q14161 759 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 NAA30Q147X3 362 aaPredicted RBP4.71□□□□□ -1.66
CHD9-221ENST00000615216 GALNTL6Q49A17 601 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 ZCWPW2Q504Y3 356 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 ANKS6Q68DC2 871 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 TAF2Q6P1X5 1199 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 NIPA1Q7RTP0 329 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 STRA8Q7Z7C7 330 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 ARID3BQ8IVW6 561 aaPredicted RBP4.71□□□□□ -1.66
CHD9-221ENST00000615216 LRRC34Q8IZ02 419 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 ZDHHC15Q96MV8 337 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 TBCBQ99426 244 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 IRX2Q9BZI1 471 aaPredicted RBP4.71□□□□□ -1.66
CHD9-221ENST00000615216 PRKD2Q9BZL6 878 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 MTMR12Q9C0I1 747 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 RAD21L1Q9H4I0 556 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 AGO4Q9HCK5 861 aaKnown RBP4.71□□□□□ -1.66
CHD9-221ENST00000615216 PRDM5Q9NQX1 630 aaPredicted RBP4.71□□□□□ -1.66
CHD9-221ENST00000615216 HEY2Q9UBP5 337 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 IPPQ9Y573 584 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 MYH11P35749 1972 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 M0QYT0 321 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 ZBTB39O15060 712 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 TPBGLP0DKB5 382 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 H2AFXP16104 143 aaPredicted RBP4.71□□□□□ -1.66
CHD9-221ENST00000615216 PTPN4P29074 926 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 FCGRTP55899 365 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 NFIAQ12857 509 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 CDKAL1Q5VV42 579 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 TTI2Q6NXR4 508 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 SPOCD1Q6ZMY3 1216 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 ASB2Q96Q27 587 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 NUDT12Q9BQG2 462 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 DDIT4Q9NX09 232 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 STK39Q9UEW8 545 aa4.71□□□□□ -1.66
CHD9-221ENST00000615216 ADGRB1O14514 1584 aa4.7□□□□□ -1.66
CHD9-221ENST00000615216 COL3A1P02461 1466 aaPredicted RBP4.7□□□□□ -1.66
CHD9-221ENST00000615216 C6orf222P0C671 652 aaPredicted RBP4.7□□□□□ -1.66
CHD9-221ENST00000615216 DNAJC3Q13217 504 aa4.7□□□□□ -1.66
CHD9-221ENST00000615216 TMEM132BQ14DG7 1078 aa4.7□□□□□ -1.66
CHD9-221ENST00000615216 ACAP1Q15027 740 aa4.7□□□□□ -1.66
CHD9-221ENST00000615216 RASA2Q15283 850 aa4.7□□□□□ -1.66
CHD9-221ENST00000615216 NT5DC1Q5TFE4 455 aa4.7□□□□□ -1.66
CHD9-221ENST00000615216 ITIH5Q86UX2 942 aa4.7□□□□□ -1.66
CHD9-221ENST00000615216 DNERQ8NFT8 737 aa4.7□□□□□ -1.66
CHD9-221ENST00000615216 APOPT1Q96IL0 206 aa4.7□□□□□ -1.66
CHD9-221ENST00000615216 TSC22D4Q9Y3Q8 395 aa4.7□□□□□ -1.66
CHD9-221ENST00000615216 SNAP23O00161 211 aa4.7□□□□□ -1.66
CHD9-221ENST00000615216 TRIM24O15164 1050 aa4.7□□□□□ -1.66
CHD9-221ENST00000615216 RNASEH1O60930 286 aaKnown RBP4.7□□□□□ -1.66
CHD9-221ENST00000615216 PROSCO94903 275 aa4.7□□□□□ -1.66
CHD9-221ENST00000615216 SGPL1O95470 568 aa4.7□□□□□ -1.66
CHD9-221ENST00000615216 GLP2RO95838 553 aa4.7□□□□□ -1.66
CHD9-221ENST00000615216 TCN1P20061 433 aaPredicted RBP4.7□□□□□ -1.66
CHD9-221ENST00000615216 MZF1P28698 734 aaPredicted RBP4.7□□□□□ -1.66
CHD9-221ENST00000615216 AVPR1AP37288 418 aa4.7□□□□□ -1.66
CHD9-221ENST00000615216 RFX5P48382 616 aaPredicted RBP4.7□□□□□ -1.66
CHD9-221ENST00000615216 HERVK_113P62684 666 aa4.7□□□□□ -1.66
CHD9-221ENST00000615216 ATP6AP1LQ52LC2 224 aa4.7□□□□□ -1.66
CHD9-221ENST00000615216 ZNF438Q7Z4V0 828 aa4.7□□□□□ -1.66
CHD9-221ENST00000615216 KYQ8NBH2 561 aa4.7□□□□□ -1.66
CHD9-221ENST00000615216 POP5Q969H6 163 aaKnown RBP4.7□□□□□ -1.66
CHD9-221ENST00000615216 SH3GL2Q99962 352 aa4.7□□□□□ -1.66
CHD9-221ENST00000615216 THUMPD3Q9BV44 507 aaKnown RBP4.7□□□□□ -1.66
CHD9-221ENST00000615216 FAM192AQ9GZU8 254 aa4.7□□□□□ -1.66
CHD9-221ENST00000615216 DMAP1Q9NPF5 467 aaPredicted RBP4.7□□□□□ -1.66
CHD9-221ENST00000615216 THAP1Q9NVV9 213 aa4.7□□□□□ -1.66
CHD9-221ENST00000615216 RABGEF1Q9UJ41 708 aa4.7□□□□□ -1.66
CHD9-221ENST00000615216 HMBSP08397 361 aa4.7□□□□□ -1.66
CHD9-221ENST00000615216 EPHB2P29323 1055 aa4.7□□□□□ -1.66
CHD9-221ENST00000615216 ALDH7A1P49419 539 aaKnown RBP4.7□□□□□ -1.66
CHD9-221ENST00000615216 BLVRAP53004 296 aa4.7□□□□□ -1.66
CHD9-221ENST00000615216 ERMARDQ5T6L9 678 aa4.7□□□□□ -1.66
CHD9-221ENST00000615216 ERO1BQ86YB8 467 aa4.7□□□□□ -1.66
CHD9-221ENST00000615216 LBHD1Q9BQE6 289 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms