RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 MOGAT1Q96PD6 335 aa4.4□□□□□ -1.71
CKS1BP3-201ENST00000600888 PLEKHF1Q96S99 279 aa4.4□□□□□ -1.71
CKS1BP3-201ENST00000600888 NELL2Q99435 816 aa4.4□□□□□ -1.71
CKS1BP3-201ENST00000600888 AGAP2Q99490 1192 aa4.4□□□□□ -1.71
CKS1BP3-201ENST00000600888 PNNQ9H307 717 aaKnown RBP4.4□□□□□ -1.71
CKS1BP3-201ENST00000600888 CPNE7Q9UBL6 633 aa4.4□□□□□ -1.71
CKS1BP3-201ENST00000600888 NARFQ9UHQ1 456 aa4.4□□□□□ -1.71
CKS1BP3-201ENST00000600888 USP42Q9H9J4 1324 aaKnown RBP4.4□□□□□ -1.71
CKS1BP3-201ENST00000600888 CACNA1FO60840 1977 aa4.4□□□□□ -1.71
CKS1BP3-201ENST00000600888 CACNA1SQ13698 1873 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 PXDNLA1KZ92 1463 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 STARD3NLO95772 234 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 MMP10P09238 476 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 MYF5P13349 255 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 CD6P30203 668 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 PLA2G5P39877 138 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 IL6STP40189 918 aaPredicted RBP4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 PXNP49023 591 aaPredicted RBP4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 NXPH1P58417 271 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 LILRA4P59901 499 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 FMO1Q01740 532 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 COL10A1Q03692 680 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 ITIH3Q06033 890 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 SLC13A2Q13183 592 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 SEMA5AQ13591 1074 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 ZNF169Q14929 603 aaPredicted RBP4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 POLD3Q15054 466 aaPredicted RBP4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 PTPRRQ15256 657 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 CNGA2Q16280 664 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 GPR162Q16538 588 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 RBM20Q5T481 1227 aaKnown RBP4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 SFRP4Q6FHJ7 346 aaPredicted RBP4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 LAYNQ6UX15 382 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 FAM109AQ8N4B1 249 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 B3GALNT2Q8NCR0 500 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 MYCBPAPQ8TBZ2 947 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 SLC9A6Q92581 669 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 MAML1Q92585 1016 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 TTC17Q96AE7 1141 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 FAM136AQ96C01 138 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 FBXL20Q96IG2 436 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 MESP1Q9BRJ9 268 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 PTDSS2Q9BVG9 487 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 TPSD1Q9BZJ3 242 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 LRRC27Q9C0I9 530 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 KIAA1586Q9HCI6 787 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 DDX21Q9NR30 783 aaKnown RBP eCLIP4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 GEMIN8Q9NWZ8 242 aaKnown RBP4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 LRIT1Q9P2V4 623 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 COL15A1P39059 1388 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 FER1L6Q2WGJ9 1857 aa4.39□□□□□ -1.71
CKS1BP3-201ENST00000600888 ANKRD36CQ5JPF3 1778 aa4.38□□□□□ -1.71
CKS1BP3-201ENST00000600888 MPPED1O15442 326 aa4.38□□□□□ -1.71
CKS1BP3-201ENST00000600888 MGEA5O60502 916 aa4.38□□□□□ -1.71
CKS1BP3-201ENST00000600888 XRCC6P12956 609 aaKnown RBP eCLIP4.38□□□□□ -1.71
CKS1BP3-201ENST00000600888 BRAFP15056 766 aa4.38□□□□□ -1.71
CKS1BP3-201ENST00000600888 TYRP1P17643 537 aa4.38□□□□□ -1.71
CKS1BP3-201ENST00000600888 PEX2P28328 305 aa4.38□□□□□ -1.71
CKS1BP3-201ENST00000600888 WNT3P56703 355 aa4.38□□□□□ -1.71
CKS1BP3-201ENST00000600888 LOXL3P58215 753 aa4.38□□□□□ -1.71
CKS1BP3-201ENST00000600888 MRPS35P82673 323 aaKnown RBP4.38□□□□□ -1.71
CKS1BP3-201ENST00000600888 PURAQ00577 322 aaKnown RBP4.38□□□□□ -1.71
CKS1BP3-201ENST00000600888 DDX10Q13206 875 aaKnown RBP4.38□□□□□ -1.71
CKS1BP3-201ENST00000600888 RAB32Q13637 225 aa4.38□□□□□ -1.71
CKS1BP3-201ENST00000600888 TAF7Q15545 349 aaPredicted RBP4.38□□□□□ -1.71
CKS1BP3-201ENST00000600888 VPS53Q5VIR6 699 aa4.38□□□□□ -1.71
CKS1BP3-201ENST00000600888 KAZNQ674X7 775 aa4.38□□□□□ -1.71
CKS1BP3-201ENST00000600888 OLFML1Q6UWY5 402 aa4.38□□□□□ -1.71
CKS1BP3-201ENST00000600888 MPP5Q8N3R9 675 aa4.38□□□□□ -1.71
CKS1BP3-201ENST00000600888 PNISRQ8TF01 805 aaKnown RBP4.38□□□□□ -1.71
CKS1BP3-201ENST00000600888 NMD3Q96D46 503 aaKnown RBP4.38□□□□□ -1.71
CKS1BP3-201ENST00000600888 PDLIM2Q96JY6 352 aa4.38□□□□□ -1.71
CKS1BP3-201ENST00000600888 ACTRT3Q9BYD9 372 aa4.38□□□□□ -1.71
CKS1BP3-201ENST00000600888 ZNF518BQ9C0D4 1074 aa4.38□□□□□ -1.71
CKS1BP3-201ENST00000600888 SACM1LQ9NTJ5 587 aa4.38□□□□□ -1.71
CKS1BP3-201ENST00000600888 BABAM1Q9NWV8 329 aa4.38□□□□□ -1.71
CKS1BP3-201ENST00000600888 SHOC2Q9UQ13 582 aa4.38□□□□□ -1.71
CKS1BP3-201ENST00000600888 ZBTB1Q9Y2K1 713 aa4.38□□□□□ -1.71
CKS1BP3-201ENST00000600888 ADCY9O60503 1353 aa4.38□□□□□ -1.71
CKS1BP3-201ENST00000600888 COL11A2P13942 1736 aaPredicted RBP4.38□□□□□ -1.71
CKS1BP3-201ENST00000600888 WDR27A2RRH5 827 aa4.37□□□□□ -1.71
CKS1BP3-201ENST00000600888 VWC2LB2RUY7 222 aa4.37□□□□□ -1.71
CKS1BP3-201ENST00000600888 TMEM233B4DJY2 109 aa4.37□□□□□ -1.71
CKS1BP3-201ENST00000600888 MAP4K4O95819 1239 aaPredicted RBP4.37□□□□□ -1.71
CKS1BP3-201ENST00000600888 CHRM2P08172 466 aa4.37□□□□□ -1.71
CKS1BP3-201ENST00000600888 HMGB1P09429 215 aaKnown RBP4.37□□□□□ -1.71
CKS1BP3-201ENST00000600888 ZKSCAN1P17029 563 aaPredicted RBP4.37□□□□□ -1.71
CKS1BP3-201ENST00000600888 KCNA3P22001 575 aa4.37□□□□□ -1.71
CKS1BP3-201ENST00000600888 CXCR5P32302 372 aa4.37□□□□□ -1.71
CKS1BP3-201ENST00000600888 RARRES1P49788 294 aa4.37□□□□□ -1.71
CKS1BP3-201ENST00000600888 DDR1Q08345 913 aa4.37□□□□□ -1.71
CKS1BP3-201ENST00000600888 SLC44A4Q53GD3 710 aa4.37□□□□□ -1.71
CKS1BP3-201ENST00000600888 C3orf38Q5JPI3 329 aa4.37□□□□□ -1.71
CKS1BP3-201ENST00000600888 ICE2Q659A1 982 aa4.37□□□□□ -1.71
CKS1BP3-201ENST00000600888 CLEC4GQ6UXB4 293 aa4.37□□□□□ -1.71
CKS1BP3-201ENST00000600888 MCM10Q7L590 875 aa4.37□□□□□ -1.71
CKS1BP3-201ENST00000600888 MICU3Q86XE3 530 aa4.37□□□□□ -1.71
CKS1BP3-201ENST00000600888 GAS2L3Q86XJ1 694 aa4.37□□□□□ -1.71
CKS1BP3-201ENST00000600888 ZNF280BQ86YH2 543 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms