RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 TMEM130Q8N3G9 435 aa9.25□□□□□ -0.93
SMAD4-215ENST00000592911 CSGALNACT2Q8N6G5 542 aa9.25□□□□□ -0.93
SMAD4-215ENST00000592911 WNT2BQ93097 391 aa9.25□□□□□ -0.93
SMAD4-215ENST00000592911 MYLPFQ96A32 169 aa9.25□□□□□ -0.93
SMAD4-215ENST00000592911 ANKRD36BP1Q96IX9 119 aa9.25□□□□□ -0.93
SMAD4-215ENST00000592911 REPIN1Q9BWE0 567 aaKnown RBP9.25□□□□□ -0.93
SMAD4-215ENST00000592911 STRA6Q9BX79 667 aa9.25□□□□□ -0.93
SMAD4-215ENST00000592911 RNF38Q9H0F5 515 aa9.25□□□□□ -0.93
SMAD4-215ENST00000592911 SPHK2Q9NRA0 654 aa9.25□□□□□ -0.93
SMAD4-215ENST00000592911 OLFML3Q9NRN5 406 aa9.25□□□□□ -0.93
SMAD4-215ENST00000592911 USP36Q9P275 1121 aaKnown RBP9.25□□□□□ -0.93
SMAD4-215ENST00000592911 CFAP97Q9P2B7 532 aa9.25□□□□□ -0.93
SMAD4-215ENST00000592911 RAXQ9Y2V3 346 aa9.25□□□□□ -0.93
SMAD4-215ENST00000592911 SH3BP1Q9Y3L3 701 aa9.25□□□□□ -0.93
SMAD4-215ENST00000592911 PCDHGA1Q9Y5H4 931 aa9.25□□□□□ -0.93
SMAD4-215ENST00000592911 ATP8B3O60423 1300 aa9.25□□□□□ -0.93
SMAD4-215ENST00000592911 FAM92AA1XBS5 289 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 ANKRD63C9JTQ0 380 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 CAPN9O14815 690 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 TNFSF14O43557 240 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 PCDHGA12O60330 932 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 STAU1O95793 577 aaKnown RBP9.24□□□□□ -0.93
SMAD4-215ENST00000592911 C1SP09871 688 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 TMEM191BP0C7N4 346 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 NDUFV2P19404 249 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 ACAT1P24752 427 aaKnown RBP9.24□□□□□ -0.93
SMAD4-215ENST00000592911 YWHAQP27348 245 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 LONP1P36776 959 aaKnown RBP9.24□□□□□ -0.93
SMAD4-215ENST00000592911 GOLGA8FQ08AF8 430 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 GOLGA8DPQ0D2H9 430 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 ORC1Q13415 861 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 ZRSR1Q15695 479 aaKnown RBP9.24□□□□□ -0.93
SMAD4-215ENST00000592911 C10orf76Q5T2E6 689 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 HECTD3Q5T447 861 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 L1TD1Q5T7N2 865 aaKnown RBP9.24□□□□□ -0.93
SMAD4-215ENST00000592911 GRAMD4Q6IC98 578 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 SLCO6A1Q86UG4 719 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 C12orf40Q86WS4 652 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 TMPRSS12Q86WS5 348 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 CHPFQ8IZ52 775 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 NUP93Q8N1F7 819 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 FRMD1Q8N878 549 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 MDM1Q8TC05 714 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 SCFD1Q8WVM8 642 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 HNRNPLLQ8WVV9 542 aaKnown RBP9.24□□□□□ -0.93
SMAD4-215ENST00000592911 KBTBD7Q8WVZ9 684 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 LARP4BQ92615 738 aaKnown RBP9.24□□□□□ -0.93
SMAD4-215ENST00000592911 RAD54LQ92698 747 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 KCTD12Q96CX2 325 aaKnown RBP9.24□□□□□ -0.93
SMAD4-215ENST00000592911 WBP1Q96G27 269 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 PCED1BQ96HM7 432 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 LRIG1Q96JA1 1093 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 MRGPRX1Q96LB2 322 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 BBC3Q96PG8 261 aaPredicted RBP9.24□□□□□ -0.93
SMAD4-215ENST00000592911 ACCSQ96QU6 501 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 TMUB1Q9BVT8 246 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 KIAA1586Q9HCI6 787 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 TM7SF3Q9NS93 570 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 TOR4AQ9NXH8 423 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 WSB2Q9NYS7 404 aaPredicted RBP9.24□□□□□ -0.93
SMAD4-215ENST00000592911 RBAKQ9NYW8 714 aaPredicted RBP9.24□□□□□ -0.93
SMAD4-215ENST00000592911 IL37Q9NZH6 218 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 STK17AQ9UEE5 414 aa9.24□□□□□ -0.93
SMAD4-215ENST00000592911 TP53BP1Q12888 1972 aaPredicted RBP9.23□□□□□ -0.93
SMAD4-215ENST00000592911 ARID1BQ8NFD5 2236 aaPredicted RBP9.23□□□□□ -0.93
SMAD4-215ENST00000592911 NPHP3-ACAD11A0A0J9YXS1 232 aa9.23□□□□□ -0.93
SMAD4-215ENST00000592911 TEX51A0A1B0GUA7 166 aa9.23□□□□□ -0.93
SMAD4-215ENST00000592911 VWA3AA6NCI4 1184 aa9.23□□□□□ -0.93
SMAD4-215ENST00000592911 METTL12A8MUP2 240 aa9.23□□□□□ -0.93
SMAD4-215ENST00000592911 MEI4A8MW99 385 aa9.23□□□□□ -0.93
SMAD4-215ENST00000592911 BCAT2O15382 392 aaPredicted RBP9.23□□□□□ -0.93
SMAD4-215ENST00000592911 ZDHHC11BP0C7U3 371 aa9.23□□□□□ -0.93
SMAD4-215ENST00000592911 BDNFP23560 247 aa9.23□□□□□ -0.93
SMAD4-215ENST00000592911 DDIT3P35638 169 aa9.23□□□□□ -0.93
SMAD4-215ENST00000592911 GRK6P43250 576 aa9.23□□□□□ -0.93
SMAD4-215ENST00000592911 AFF3P51826 1226 aaKnown RBP9.23□□□□□ -0.93
SMAD4-215ENST00000592911 KDSRQ06136 332 aa9.23□□□□□ -0.93
SMAD4-215ENST00000592911 TAF10Q12962 218 aa9.23□□□□□ -0.93
SMAD4-215ENST00000592911 ENPP2Q13822 863 aa9.23□□□□□ -0.93
SMAD4-215ENST00000592911 DUOXA2Q1HG44 320 aa9.23□□□□□ -0.93
SMAD4-215ENST00000592911 EMC10Q5UCC4 262 aa9.23□□□□□ -0.93
SMAD4-215ENST00000592911 KLHDC10Q6PID8 442 aa9.23□□□□□ -0.93
SMAD4-215ENST00000592911 HTR3DQ70Z44 454 aa9.23□□□□□ -0.93
SMAD4-215ENST00000592911 OSTM1Q86WC4 334 aa9.23□□□□□ -0.93
SMAD4-215ENST00000592911 CACTIN-AS1Q8N1I8 211 aa9.23□□□□□ -0.93
SMAD4-215ENST00000592911 TTC16Q8NEE8 873 aa9.23□□□□□ -0.93
SMAD4-215ENST00000592911 ANKK1Q8NFD2 765 aa9.23□□□□□ -0.93
SMAD4-215ENST00000592911 NXPE2Q96DL1 559 aa9.23□□□□□ -0.93
SMAD4-215ENST00000592911 HPDLQ96IR7 371 aa9.23□□□□□ -0.93
SMAD4-215ENST00000592911 FBRSQ9HAH7 460 aa9.23□□□□□ -0.93
SMAD4-215ENST00000592911 CRTAC1Q9NQ79 661 aa9.23□□□□□ -0.93
SMAD4-215ENST00000592911 ITM2CQ9NQX7 267 aa9.23□□□□□ -0.93
SMAD4-215ENST00000592911 BLOC1S4Q9NUP1 217 aa9.23□□□□□ -0.93
SMAD4-215ENST00000592911 INTS13Q9NVM9 706 aa9.23□□□□□ -0.93
SMAD4-215ENST00000592911 SIX4Q9UIU6 781 aa9.23□□□□□ -0.93
SMAD4-215ENST00000592911 CYP8B1Q9UNU6 501 aa9.23□□□□□ -0.93
SMAD4-215ENST00000592911 SLC27A6Q9Y2P4 619 aa9.23□□□□□ -0.93
SMAD4-215ENST00000592911 MYO18BQ8IUG5 2567 aa9.23□□□□□ -0.93
SMAD4-215ENST00000592911 CFAP46Q8IYW2 2715 aa9.22□□□□□ -0.93
SMAD4-215ENST00000592911 NUMA1Q14980 2115 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms