RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 TEX19Q8NA77 164 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 CUL5Q93034 780 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 HPS3Q969F9 1004 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 EVI5LQ96CN4 794 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 ATXN7L3BQ96GX2 97 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 GPATCH3Q96I76 525 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 SEC62Q99442 399 aaKnown RBP5.4□□□□□ -1.54
ERCC1-216ENST00000592444 OSBPL2Q9H1P3 480 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 LINC00597Q9H2U6 94 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 KAT14Q9H8E8 782 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 MINDY3Q9H8M7 445 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 IFT122Q9HBG6 1241 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 AGO4Q9HCK5 861 aaKnown RBP5.4□□□□□ -1.54
ERCC1-216ENST00000592444 TM9SF3Q9HD45 589 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 NEUROD4Q9HD90 331 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 SUCLA2Q9P2R7 463 aaPredicted RBP5.4□□□□□ -1.54
ERCC1-216ENST00000592444 ANAPC4Q9UJX5 808 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 FBXL5Q9UKA1 691 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 PPM1HQ9ULR3 514 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 RBM19Q9Y4C8 960 aaKnown RBP5.4□□□□□ -1.54
ERCC1-216ENST00000592444 PCDHGA8Q9Y5G5 932 aa5.4□□□□□ -1.54
ERCC1-216ENST00000592444 ANK2Q01484 3957 aa5.4□□□□□ -1.55
ERCC1-216ENST00000592444 MYH9P35579 1960 aaKnown RBP5.39□□□□□ -1.55
ERCC1-216ENST00000592444 SERTM1A2A2V5 107 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 HEATR9A2RTY3 570 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 KLRF2D3W0D1 207 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 RNF113AO15541 343 aaKnown RBP5.39□□□□□ -1.55
ERCC1-216ENST00000592444 B3GAT3O94766 335 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 APODP05090 189 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 ALDH1A3P47895 512 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 DNM2P50570 870 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 HDAC4P56524 1084 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 SFSWAPQ12872 951 aaKnown RBP5.39□□□□□ -1.55
ERCC1-216ENST00000592444 BNIP3Q12983 259 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 NMIQ13287 307 aaPredicted RBP5.39□□□□□ -1.55
ERCC1-216ENST00000592444 PLD1Q13393 1074 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 LACTB2Q53H82 288 aaPredicted RBP5.39□□□□□ -1.55
ERCC1-216ENST00000592444 CD300LGQ6UXG3 332 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 ADAT2Q7Z6V5 191 aaKnown RBP5.39□□□□□ -1.55
ERCC1-216ENST00000592444 C14orf80Q86SX3 495 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 CDH24Q86UP0 819 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 SGMS1Q86VZ5 419 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 HACE1Q8IYU2 909 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 CCDC82Q8N4S0 544 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 IPO4Q8TEX9 1081 aaKnown RBP5.39□□□□□ -1.55
ERCC1-216ENST00000592444 TNFRSF25Q93038 417 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 PSMG2Q969U7 264 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 CPB2Q96IY4 423 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 FAM167AQ96KS9 214 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 MRGPRX1Q96LB2 322 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 C5orf34Q96MH7 638 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 GCNAQ96QF7 691 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 PNKPQ96T60 521 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 ELF4Q99607 663 aaPredicted RBP5.39□□□□□ -1.55
ERCC1-216ENST00000592444 SLC30A3Q99726 388 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 MXRA8Q9BRK3 442 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 TRIM6Q9C030 488 aaPredicted RBP5.39□□□□□ -1.55
ERCC1-216ENST00000592444 KIF9Q9HAQ2 790 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 CD248Q9HCU0 757 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 NRBP2Q9NSY0 501 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 GABBR1Q9UBS5 961 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 TJP2Q9UDY2 1190 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 MAFFQ9ULX9 164 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 ZNF232Q9UNY5 417 aa5.39□□□□□ -1.55
ERCC1-216ENST00000592444 ZNF638Q14966 1978 aaKnown RBP5.38□□□□□ -1.55
ERCC1-216ENST00000592444 MYMKA6NI61 221 aa5.38□□□□□ -1.55
ERCC1-216ENST00000592444 KCNJ18B7U540 433 aa5.38□□□□□ -1.55
ERCC1-216ENST00000592444 H7C4K7 107 aa5.38□□□□□ -1.55
ERCC1-216ENST00000592444 M0R082 166 aa5.38□□□□□ -1.55
ERCC1-216ENST00000592444 PTGESO14684 152 aa5.38□□□□□ -1.55
ERCC1-216ENST00000592444 TRAPPC3O43617 180 aa5.38□□□□□ -1.55
ERCC1-216ENST00000592444 PRICKLE3O43900 615 aaPredicted RBP5.38□□□□□ -1.55
ERCC1-216ENST00000592444 MARCH6O60337 910 aa5.38□□□□□ -1.55
ERCC1-216ENST00000592444 TSPAN3O60637 253 aa5.38□□□□□ -1.55
ERCC1-216ENST00000592444 VNN2O95498 520 aa5.38□□□□□ -1.55
ERCC1-216ENST00000592444 THP07101 528 aa5.38□□□□□ -1.55
ERCC1-216ENST00000592444 CPB1P15086 417 aa5.38□□□□□ -1.55
ERCC1-216ENST00000592444 NR1D1P20393 614 aa5.38□□□□□ -1.55
ERCC1-216ENST00000592444 CDC25CP30307 473 aa5.38□□□□□ -1.55
ERCC1-216ENST00000592444 SLC5A2P31639 672 aa5.38□□□□□ -1.55
ERCC1-216ENST00000592444 SLC6A4P31645 630 aa5.38□□□□□ -1.55
ERCC1-216ENST00000592444 HSPA4P34932 840 aa5.38□□□□□ -1.55
ERCC1-216ENST00000592444 DDIT3P35638 169 aa5.38□□□□□ -1.55
ERCC1-216ENST00000592444 TNFRSF4P43489 277 aa5.38□□□□□ -1.55
ERCC1-216ENST00000592444 QARSP47897 775 aaKnown RBP5.38□□□□□ -1.55
ERCC1-216ENST00000592444 RPL10AP62906 217 aaKnown RBP5.38□□□□□ -1.55
ERCC1-216ENST00000592444 GRIN1Q05586 938 aa5.38□□□□□ -1.55
ERCC1-216ENST00000592444 KDSRQ06136 332 aa5.38□□□□□ -1.55
ERCC1-216ENST00000592444 DUSP4Q13115 394 aa5.38□□□□□ -1.55
ERCC1-216ENST00000592444 LRP8Q14114 963 aa5.38□□□□□ -1.55
ERCC1-216ENST00000592444 NECTIN1Q15223 517 aa5.38□□□□□ -1.55
ERCC1-216ENST00000592444 NAB2Q15742 525 aa5.38□□□□□ -1.55
ERCC1-216ENST00000592444 ISXQ2M1V0 245 aa5.38□□□□□ -1.55
ERCC1-216ENST00000592444 SLC35G1Q2M3R5 365 aa5.38□□□□□ -1.55
ERCC1-216ENST00000592444 CTXN3Q4LDR2 81 aa5.38□□□□□ -1.55
ERCC1-216ENST00000592444 TBCELQ5QJ74 424 aa5.38□□□□□ -1.55
ERCC1-216ENST00000592444 VPS53Q5VIR6 699 aa5.38□□□□□ -1.55
ERCC1-216ENST00000592444 NOTUMQ6P988 496 aa5.38□□□□□ -1.55
ERCC1-216ENST00000592444 Q71RC1 249 aaPredicted RBP5.38□□□□□ -1.55
ERCC1-216ENST00000592444 TRMT11Q7Z4G4 463 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms