RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 GPATCH2LQ9NWQ4 482 aa19.94■□□□□ 0.78
PRKCSH-209ENST00000589838 HEY1Q9Y5J3 304 aa19.94■□□□□ 0.78
PRKCSH-209ENST00000589838 IKBKGQ9Y6K9 419 aa19.94■□□□□ 0.78
PRKCSH-209ENST00000589838 HUS1O60921 280 aa19.93■□□□□ 0.78
PRKCSH-209ENST00000589838 RASSF9O75901 435 aa19.93■□□□□ 0.78
PRKCSH-209ENST00000589838 PDGFRBP09619 1106 aa19.93■□□□□ 0.78
PRKCSH-209ENST00000589838 FAM163BP0C2L3 166 aa19.93■□□□□ 0.78
PRKCSH-209ENST00000589838 ADORA2BP29275 332 aa19.93■□□□□ 0.78
PRKCSH-209ENST00000589838 FOXN2P32314 431 aa19.93■□□□□ 0.78
PRKCSH-209ENST00000589838 SLC8A3P57103 927 aa19.93■□□□□ 0.78
PRKCSH-209ENST00000589838 SEPT7Q16181 437 aaKnown RBP19.93■□□□□ 0.78
PRKCSH-209ENST00000589838 DPYSL2Q16555 572 aa19.93■□□□□ 0.78
PRKCSH-209ENST00000589838 PRAMEF19Q5SWL8 479 aa19.93■□□□□ 0.78
PRKCSH-209ENST00000589838 C4orf33Q8N1A6 199 aa19.93■□□□□ 0.78
PRKCSH-209ENST00000589838 KBTBD7Q8WVZ9 684 aa19.93■□□□□ 0.78
PRKCSH-209ENST00000589838 MRRFQ96E11 262 aaKnown RBP19.93■□□□□ 0.78
PRKCSH-209ENST00000589838 DPEP3Q9H4B8 488 aa19.93■□□□□ 0.78
PRKCSH-209ENST00000589838 NRDE2Q9H7Z3 1164 aa19.93■□□□□ 0.78
PRKCSH-209ENST00000589838 RAB6BQ9NRW1 208 aa19.93■□□□□ 0.78
PRKCSH-209ENST00000589838 PRKAG3Q9UGI9 489 aa19.93■□□□□ 0.78
PRKCSH-209ENST00000589838 Q9Y3F1 56 aa19.93■□□□□ 0.78
PRKCSH-209ENST00000589838 STARD13Q9Y3M8 1113 aa19.93■□□□□ 0.78
PRKCSH-209ENST00000589838 IQANK1A0A1B0GTG1 560 aa19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 TYROBPO43914 113 aa19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 GABBR2O75899 941 aa19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 ZNF865P0CJ78 1059 aaPredicted RBP19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 ELK3P41970 407 aa19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 ZKSCAN8Q15776 578 aaPredicted RBP19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 PDK4Q16654 411 aa19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 SPRED3Q2MJR0 410 aa19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 RNF43Q68DV7 783 aa19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 LIMS2Q7Z4I7 341 aa19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 SUGP1Q8IWZ8 645 aaKnown RBP19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 C11orf84Q9BUA3 381 aaPredicted RBP19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 B3GNT5Q9BYG0 378 aa19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 PNPLA8Q9NP80 782 aa19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 CHMP2BQ9UQN3 213 aa19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 TEX264Q9Y6I9 313 aa19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 CFAP73A6NFT4 308 aa19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 MYL3P08590 195 aa19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 LCP1P13796 627 aa19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 CCDC130P13994 396 aa19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 KRT4P19013 534 aa19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 CYP2F1P24903 491 aa19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 RBL1P28749 1068 aa19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 L1CAMP32004 1257 aa19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 RPA3P35244 121 aaPredicted RBP19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 MAGEA6P43360 314 aa19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 SF3A3Q12874 501 aaKnown RBP eCLIP19.92■□□□□ 0.781e-6■■■■■ 29.6
PRKCSH-209ENST00000589838 GPR162Q16538 588 aa19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 PPP6R3Q5H9R7 873 aaPredicted RBP19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 OLFML2BQ68BL8 750 aa19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 STRADAQ7RTN6 431 aa19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 TOP6BLQ8N6T0 577 aa19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 LRRC8CQ8TDW0 803 aa19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 KLC4Q9NSK0 619 aa19.92■□□□□ 0.78
PRKCSH-209ENST00000589838 A0A1W2PPM1 405 aa19.91■□□□□ 0.78
PRKCSH-209ENST00000589838 C17orf102A2RUQ5 167 aa19.91■□□□□ 0.78
PRKCSH-209ENST00000589838 TM9SF1O15321 606 aa19.91■□□□□ 0.78
PRKCSH-209ENST00000589838 CELF2O95319 508 aaKnown RBP19.91■□□□□ 0.78
PRKCSH-209ENST00000589838 FGFR1P11362 822 aa19.91■□□□□ 0.78
PRKCSH-209ENST00000589838 ZNF200P98182 395 aaPredicted RBP19.91■□□□□ 0.78
PRKCSH-209ENST00000589838 CA9Q16790 459 aa19.91■□□□□ 0.78
PRKCSH-209ENST00000589838 UBXN11Q5T124 520 aa19.91■□□□□ 0.78
PRKCSH-209ENST00000589838 DCAKDQ8WVC6 231 aa19.91■□□□□ 0.78
PRKCSH-209ENST00000589838 LRRC39Q96DD0 335 aa19.91■□□□□ 0.78
PRKCSH-209ENST00000589838 WDR83Q9BRX9 315 aaKnown RBP19.91■□□□□ 0.78
PRKCSH-209ENST00000589838 DHX35Q9H5Z1 703 aaKnown RBP19.91■□□□□ 0.78
PRKCSH-209ENST00000589838 ABCF3Q9NUQ8 709 aa19.91■□□□□ 0.78
PRKCSH-209ENST00000589838 KLK14Q9P0G3 267 aa19.91■□□□□ 0.78
PRKCSH-209ENST00000589838 CPA4Q9UI42 421 aa19.91■□□□□ 0.78
PRKCSH-209ENST00000589838 AP4E1Q9UPM8 1137 aa19.91■□□□□ 0.78
PRKCSH-209ENST00000589838 XPO1O14980 1071 aaKnown RBP19.9■□□□□ 0.78
PRKCSH-209ENST00000589838 TREHO43280 583 aa19.9■□□□□ 0.78
PRKCSH-209ENST00000589838 GSTA2P09210 222 aa19.9■□□□□ 0.78
PRKCSH-209ENST00000589838 WARSP23381 471 aaKnown RBP19.9■□□□□ 0.78
PRKCSH-209ENST00000589838 YWHAGP61981 247 aaKnown RBP eCLIP19.9■□□□□ 0.78
PRKCSH-209ENST00000589838 BZW1Q7L1Q6 419 aaKnown RBP19.9■□□□□ 0.78
PRKCSH-209ENST00000589838 ADGRF2Q8IZF7 708 aa19.9■□□□□ 0.78
PRKCSH-209ENST00000589838 MCUQ8NE86 351 aa19.9■□□□□ 0.78
PRKCSH-209ENST00000589838 KIF9Q9HAQ2 790 aa19.9■□□□□ 0.78
PRKCSH-209ENST00000589838 RXFP1Q9HBX9 757 aa19.9■□□□□ 0.78
PRKCSH-209ENST00000589838 ETNK2Q9NVF9 386 aa19.9■□□□□ 0.78
PRKCSH-209ENST00000589838 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.9■□□□□ 0.786e-6■□□□□ 10.3
PRKCSH-209ENST00000589838 GTF2IRD1Q9UHL9 959 aa19.9■□□□□ 0.78
PRKCSH-209ENST00000589838 SPTLC1O15269 473 aa19.9■□□□□ 0.78
PRKCSH-209ENST00000589838 MT-ND3P03897 115 aa19.9■□□□□ 0.78
PRKCSH-209ENST00000589838 LMO2P25791 158 aa19.9■□□□□ 0.78
PRKCSH-209ENST00000589838 SLC45A4Q5BKX6 768 aa19.9■□□□□ 0.78
PRKCSH-209ENST00000589838 PSTKQ8IV42 348 aaKnown RBP19.9■□□□□ 0.78
PRKCSH-209ENST00000589838 SLC2A14Q8TDB8 520 aa19.9■□□□□ 0.78
PRKCSH-209ENST00000589838 HNRNPABQ99729 332 aaKnown RBP19.9■□□□□ 0.78
PRKCSH-209ENST00000589838 RCOR3Q9P2K3 495 aaPredicted RBP19.9■□□□□ 0.78
PRKCSH-209ENST00000589838 IPPQ9Y573 584 aa19.9■□□□□ 0.78
PRKCSH-209ENST00000589838 TRIP12Q14669 1992 aaPredicted RBP19.89■□□□□ 0.77
PRKCSH-209ENST00000589838 TRDMT1O14717 391 aaKnown RBP19.89■□□□□ 0.77
PRKCSH-209ENST00000589838 GCATO75600 419 aa19.89■□□□□ 0.77
PRKCSH-209ENST00000589838 INHBAP08476 426 aa19.89■□□□□ 0.77
PRKCSH-209ENST00000589838 CCDC15Q0P6D6 951 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms