RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 PAPSS1O43252 624 aaPredicted RBP20.52■□□□□ 0.88
CIRBP-220ENST00000588917 RTN2O75298 545 aa20.52■□□□□ 0.88
CIRBP-220ENST00000588917 TADA3O75528 432 aa20.52■□□□□ 0.88
CIRBP-220ENST00000588917 RARGP13631 454 aa20.52■□□□□ 0.88
CIRBP-220ENST00000588917 SCNN1AP37088 669 aa20.52■□□□□ 0.88
CIRBP-220ENST00000588917 YWHAZP63104 245 aaKnown RBP20.52■□□□□ 0.88
CIRBP-220ENST00000588917 SLC6A3Q01959 620 aa20.52■□□□□ 0.88
CIRBP-220ENST00000588917 C1QBPQ07021 282 aaKnown RBP20.52■□□□□ 0.88
CIRBP-220ENST00000588917 MAPK8IP2Q13387 824 aaPredicted RBP20.52■□□□□ 0.88
CIRBP-220ENST00000588917 SCD5Q86SK9 330 aa20.52■□□□□ 0.88
CIRBP-220ENST00000588917 ZSCAN18Q8TBC5 510 aaPredicted RBP20.52■□□□□ 0.88
CIRBP-220ENST00000588917 RNF139Q8WU17 664 aa20.52■□□□□ 0.88
CIRBP-220ENST00000588917 TRPV4Q9HBA0 871 aa20.52■□□□□ 0.88
CIRBP-220ENST00000588917 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.52■□□□□ 0.88
CIRBP-220ENST00000588917 PIEZO1Q92508 2521 aa20.52■□□□□ 0.87
CIRBP-220ENST00000588917 YJEFN3A6XGL0 299 aa20.51■□□□□ 0.87
CIRBP-220ENST00000588917 E7ENQ6 273 aa20.51■□□□□ 0.87
CIRBP-220ENST00000588917 DDX3XO00571 662 aaKnown RBP eCLIP20.51■□□□□ 0.87
CIRBP-220ENST00000588917 TLR5O60602 858 aa20.51■□□□□ 0.87
CIRBP-220ENST00000588917 OAS1P00973 400 aaKnown RBP20.51■□□□□ 0.87
CIRBP-220ENST00000588917 LTFP02788 710 aa20.51■□□□□ 0.87
CIRBP-220ENST00000588917 CKMP06732 381 aa20.51■□□□□ 0.87
CIRBP-220ENST00000588917 GSDMDP57764 484 aa20.51■□□□□ 0.87
CIRBP-220ENST00000588917 RSRC2Q7L4I2 434 aaKnown RBP20.51■□□□□ 0.87
CIRBP-220ENST00000588917 RNF135Q8IUD6 432 aa20.51■□□□□ 0.87
CIRBP-220ENST00000588917 ARID3BQ8IVW6 561 aaPredicted RBP20.51■□□□□ 0.87
CIRBP-220ENST00000588917 SPC24Q8NBT2 197 aa20.51■□□□□ 0.87
CIRBP-220ENST00000588917 FAM149B1Q96BN6 582 aa20.51■□□□□ 0.87
CIRBP-220ENST00000588917 ZSWIM3Q96MP5 696 aa20.51■□□□□ 0.87
CIRBP-220ENST00000588917 ASB16Q96NS5 453 aa20.51■□□□□ 0.87
CIRBP-220ENST00000588917 NMUR1Q9HB89 426 aa20.51■□□□□ 0.87
CIRBP-220ENST00000588917 ZFP14Q9HCL3 533 aa20.51■□□□□ 0.87
CIRBP-220ENST00000588917 TDP1Q9NUW8 608 aa20.51■□□□□ 0.87
CIRBP-220ENST00000588917 TMEM51Q9NW97 253 aa20.51■□□□□ 0.87
CIRBP-220ENST00000588917 IGSF9Q9P2J2 1179 aa20.51■□□□□ 0.87
CIRBP-220ENST00000588917 MYH10P35580 1976 aa20.51■□□□□ 0.87
CIRBP-220ENST00000588917 C5orf42Q9H799 3197 aa20.51■□□□□ 0.87
CIRBP-220ENST00000588917 C2orf16Q68DN1 1984 aa20.5■□□□□ 0.87
CIRBP-220ENST00000588917 C2orf78A6NCI8 922 aa20.5■□□□□ 0.87
CIRBP-220ENST00000588917 C2CD4DB7Z1M9 353 aa20.5■□□□□ 0.87
CIRBP-220ENST00000588917 DPYSL4O14531 572 aa20.5■□□□□ 0.87
CIRBP-220ENST00000588917 CAPN9O14815 690 aa20.5■□□□□ 0.87
CIRBP-220ENST00000588917 AKR1B10O60218 316 aa20.5■□□□□ 0.87
CIRBP-220ENST00000588917 ERBB2P04626 1255 aa20.5■□□□□ 0.87
CIRBP-220ENST00000588917 EIF4A3P38919 411 aaKnown RBP20.5■□□□□ 0.87
CIRBP-220ENST00000588917 SLC7A9P82251 487 aa20.5■□□□□ 0.87
CIRBP-220ENST00000588917 FAM78AQ5JUQ0 283 aa20.5■□□□□ 0.87
CIRBP-220ENST00000588917 STXBP5Q5T5C0 1151 aa20.5■□□□□ 0.87
CIRBP-220ENST00000588917 CELF5Q8N6W0 485 aaKnown RBP20.5■□□□□ 0.87
CIRBP-220ENST00000588917 TRIM11Q96F44 468 aa20.5■□□□□ 0.87
CIRBP-220ENST00000588917 ISCUQ9H1K1 167 aa20.5■□□□□ 0.87
CIRBP-220ENST00000588917 NHEJ1Q9H9Q4 299 aaPredicted RBP20.5■□□□□ 0.87
CIRBP-220ENST00000588917 KIF9Q9HAQ2 790 aa20.5■□□□□ 0.87
CIRBP-220ENST00000588917 POPDC2Q9HBU9 364 aa20.5■□□□□ 0.87
CIRBP-220ENST00000588917 OBP2AQ9NY56 170 aa20.5■□□□□ 0.87
CIRBP-220ENST00000588917 MUTYHQ9UIF7 546 aa20.5■□□□□ 0.87
CIRBP-220ENST00000588917 DNMT3LQ9UJW3 386 aa20.5■□□□□ 0.87
CIRBP-220ENST00000588917 HSF2BPO75031 334 aa20.49■□□□□ 0.87
CIRBP-220ENST00000588917 OLFM2O95897 454 aa20.49■□□□□ 0.87
CIRBP-220ENST00000588917 FTLP02792 175 aaPredicted RBP20.49■□□□□ 0.87
CIRBP-220ENST00000588917 PLEKP08567 350 aaPredicted RBP20.49■□□□□ 0.87
CIRBP-220ENST00000588917 GOLGA8FQ08AF8 430 aa20.49■□□□□ 0.87
CIRBP-220ENST00000588917 GOLGA8DPQ0D2H9 430 aa20.49■□□□□ 0.87
CIRBP-220ENST00000588917 SLC18A3Q16572 532 aa20.49■□□□□ 0.87
CIRBP-220ENST00000588917 C10orf120Q5SQS8 335 aa20.49■□□□□ 0.87
CIRBP-220ENST00000588917 ALKBH5Q6P6C2 394 aaKnown RBP20.49■□□□□ 0.87
CIRBP-220ENST00000588917 MMS22LQ6ZRQ5 1243 aa20.49■□□□□ 0.87
CIRBP-220ENST00000588917 FAM183BPQ6ZVS7 135 aa20.49■□□□□ 0.87
CIRBP-220ENST00000588917 SLC26A9Q7LBE3 791 aa20.49■□□□□ 0.87
CIRBP-220ENST00000588917 ARCQ7LC44 396 aa20.49■□□□□ 0.87
CIRBP-220ENST00000588917 BHLHA9Q7RTU4 235 aa20.49■□□□□ 0.87
CIRBP-220ENST00000588917 DDX42Q86XP3 938 aaKnown RBP eCLIP20.49■□□□□ 0.87
CIRBP-220ENST00000588917 XYLT1Q86Y38 959 aa20.49■□□□□ 0.87
CIRBP-220ENST00000588917 TMTC1Q8IUR5 882 aa20.49■□□□□ 0.87
CIRBP-220ENST00000588917 CCDC170Q8IYT3 715 aa20.49■□□□□ 0.87
CIRBP-220ENST00000588917 ARL14EPQ8N8R7 260 aaPredicted RBP20.49■□□□□ 0.87
CIRBP-220ENST00000588917 NDRG1Q92597 394 aaKnown RBP20.49■□□□□ 0.87
CIRBP-220ENST00000588917 ELSPBP1Q96BH3 223 aa20.49■□□□□ 0.87
CIRBP-220ENST00000588917 CYP2S1Q96SQ9 504 aa20.49■□□□□ 0.87
CIRBP-220ENST00000588917 RNF38Q9H0F5 515 aa20.49■□□□□ 0.87
CIRBP-220ENST00000588917 CCSER2Q9H7U1 834 aa20.49■□□□□ 0.87
CIRBP-220ENST00000588917 OSER1Q9NX31 292 aa20.49■□□□□ 0.87
CIRBP-220ENST00000588917 RRN3Q9NYV6 651 aa20.49■□□□□ 0.87
CIRBP-220ENST00000588917 GREB1Q4ZG55 1949 aa20.49■□□□□ 0.87
CIRBP-220ENST00000588917 PATJQ8NI35 1801 aa20.48■□□□□ 0.87
CIRBP-220ENST00000588917 ANHXE9PGG2 379 aa20.48■□□□□ 0.87
CIRBP-220ENST00000588917 COCHO43405 550 aa20.48■□□□□ 0.87
CIRBP-220ENST00000588917 ECI2O75521 394 aa20.48■□□□□ 0.87
CIRBP-220ENST00000588917 MYBL1P10243 752 aa20.48■□□□□ 0.87
CIRBP-220ENST00000588917 MBL2P11226 248 aaPredicted RBP20.48■□□□□ 0.87
CIRBP-220ENST00000588917 NCAM1P13591 858 aa20.48■□□□□ 0.87
CIRBP-220ENST00000588917 SP100P23497 879 aaPredicted RBP20.48■□□□□ 0.87
CIRBP-220ENST00000588917 KPNA1P52294 538 aaPredicted RBP20.48■□□□□ 0.87
CIRBP-220ENST00000588917 GSCP56915 257 aaPredicted RBP20.48■□□□□ 0.87
CIRBP-220ENST00000588917 COG7P83436 770 aa20.48■□□□□ 0.87
CIRBP-220ENST00000588917 CCDC122Q5T0U0 273 aa20.48■□□□□ 0.87
CIRBP-220ENST00000588917 OLFML1Q6UWY5 402 aa20.48■□□□□ 0.87
CIRBP-220ENST00000588917 MCOLN2Q8IZK6 566 aa20.48■□□□□ 0.87
CIRBP-220ENST00000588917 KIAA1958Q8N8K9 716 aa20.48■□□□□ 0.87
CIRBP-220ENST00000588917 CLEC4CQ8WTT0 213 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms