RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 KCTD13Q8WZ19 329 aa18.88■□□□□ 0.61
SMPD3-211ENST00000568373 EURLQ9NYK6 297 aa18.88■□□□□ 0.61
SMPD3-211ENST00000568373 PADI3Q9ULW8 664 aa18.88■□□□□ 0.61
SMPD3-211ENST00000568373 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.88■□□□□ 0.61
SMPD3-211ENST00000568373 BEST1O76090 585 aa18.88■□□□□ 0.61
SMPD3-211ENST00000568373 L1CAMP32004 1257 aa18.88■□□□□ 0.61
SMPD3-211ENST00000568373 LHX1P48742 406 aa18.88■□□□□ 0.61
SMPD3-211ENST00000568373 SCNN1GP51170 649 aa18.88■□□□□ 0.61
SMPD3-211ENST00000568373 ARL4CP56559 192 aa18.88■□□□□ 0.61
SMPD3-211ENST00000568373 CAP1Q01518 475 aa18.88■□□□□ 0.61
SMPD3-211ENST00000568373 GAD2Q05329 585 aa18.88■□□□□ 0.61
SMPD3-211ENST00000568373 HP1BP3Q5SSJ5 553 aaPredicted RBP18.88■□□□□ 0.61
SMPD3-211ENST00000568373 CCSAPQ6IQ19 270 aaPredicted RBP18.88■□□□□ 0.61
SMPD3-211ENST00000568373 CLEC20AQ6ZU45 233 aa18.88■□□□□ 0.61
SMPD3-211ENST00000568373 B4GALNT4Q76KP1 1039 aa18.88■□□□□ 0.61
SMPD3-211ENST00000568373 OSBPL7Q9BZF2 842 aa18.88■□□□□ 0.61
SMPD3-211ENST00000568373 FAM107BQ9H098 131 aa18.88■□□□□ 0.61
SMPD3-211ENST00000568373 USP29Q9HBJ7 922 aa18.88■□□□□ 0.61
SMPD3-211ENST00000568373 INTS9Q9NV88 658 aaKnown RBP18.88■□□□□ 0.61
SMPD3-211ENST00000568373 AP4E1Q9UPM8 1137 aa18.88■□□□□ 0.61
SMPD3-211ENST00000568373 NAALADL1Q9UQQ1 740 aa18.88■□□□□ 0.61
SMPD3-211ENST00000568373 HEY1Q9Y5J3 304 aa18.88■□□□□ 0.61
SMPD3-211ENST00000568373 EXOC1LA0A1B0GW35 172 aa18.87■□□□□ 0.61
SMPD3-211ENST00000568373 PRKAR2AP13861 404 aaKnown RBP18.87■□□□□ 0.61
SMPD3-211ENST00000568373 CYP2F1P24903 491 aa18.87■□□□□ 0.61
SMPD3-211ENST00000568373 CST5P28325 142 aaPredicted RBP18.87■□□□□ 0.61
SMPD3-211ENST00000568373 CD52P31358 61 aa18.87■□□□□ 0.61
SMPD3-211ENST00000568373 RPL9P32969 192 aaKnown RBP18.87■□□□□ 0.61
SMPD3-211ENST00000568373 NRLP54845 237 aa18.87■□□□□ 0.61
SMPD3-211ENST00000568373 BASP1P80723 227 aaKnown RBP18.87■□□□□ 0.61
SMPD3-211ENST00000568373 SLC25A52Q3SY17 297 aa18.87■□□□□ 0.61
SMPD3-211ENST00000568373 SRLQ86TD4 932 aa18.87■□□□□ 0.61
SMPD3-211ENST00000568373 C3orf58Q8NDZ4 430 aa18.87■□□□□ 0.61
SMPD3-211ENST00000568373 FAM149B1Q96BN6 582 aa18.87■□□□□ 0.61
SMPD3-211ENST00000568373 MED10Q9BTT4 135 aa18.87■□□□□ 0.61
SMPD3-211ENST00000568373 DHX35Q9H5Z1 703 aaKnown RBP18.87■□□□□ 0.61
SMPD3-211ENST00000568373 NRDE2Q9H7Z3 1164 aa18.87■□□□□ 0.61
SMPD3-211ENST00000568373 CRTAC1Q9NQ79 661 aa18.87■□□□□ 0.61
SMPD3-211ENST00000568373 HTTP42858 3142 aa18.87■□□□□ 0.61
SMPD3-211ENST00000568373 TCRBV7S3A2A0A539 114 aa18.86■□□□□ 0.61
SMPD3-211ENST00000568373 CFAP69A5D8W1 941 aa18.86■□□□□ 0.61
SMPD3-211ENST00000568373 ZNF623O75123 536 aa18.86■□□□□ 0.61
SMPD3-211ENST00000568373 DAB1O75553 588 aa18.86■□□□□ 0.61
SMPD3-211ENST00000568373 TMEM63AO94886 807 aa18.86■□□□□ 0.61
SMPD3-211ENST00000568373 FAM200BP0CF97 657 aa18.86■□□□□ 0.61
SMPD3-211ENST00000568373 GHRP10912 638 aa18.86■□□□□ 0.61
SMPD3-211ENST00000568373 RAB27AP51159 221 aa18.86■□□□□ 0.61
SMPD3-211ENST00000568373 MRPS5P82675 430 aaKnown RBP18.86■□□□□ 0.61
SMPD3-211ENST00000568373 FNBP1LQ5T0N5 605 aa18.86■□□□□ 0.61
SMPD3-211ENST00000568373 DSTYKQ6XUX3 929 aa18.86■□□□□ 0.61
SMPD3-211ENST00000568373 CCDC13Q8IYE1 715 aa18.86■□□□□ 0.61
SMPD3-211ENST00000568373 DEFB106AQ8N104 65 aa18.86■□□□□ 0.61
SMPD3-211ENST00000568373 CYP4X1Q8N118 509 aa18.86■□□□□ 0.61
SMPD3-211ENST00000568373 TAB3Q8N5C8 712 aaPredicted RBP18.86■□□□□ 0.61
SMPD3-211ENST00000568373 NDRG1Q92597 394 aaKnown RBP18.86■□□□□ 0.61
SMPD3-211ENST00000568373 RTP4Q96DX8 246 aa18.86■□□□□ 0.61
SMPD3-211ENST00000568373 SYT15Q9BQS2 421 aa18.86■□□□□ 0.61
SMPD3-211ENST00000568373 VPS37BQ9H9H4 285 aa18.86■□□□□ 0.61
SMPD3-211ENST00000568373 LRRC4Q9HBW1 653 aa18.86■□□□□ 0.61
SMPD3-211ENST00000568373 MTMR10Q9NXD2 777 aa18.86■□□□□ 0.61
SMPD3-211ENST00000568373 TBK1Q9UHD2 729 aa18.86■□□□□ 0.61
SMPD3-211ENST00000568373 RRP15Q9Y3B9 282 aaKnown RBP18.86■□□□□ 0.61
SMPD3-211ENST00000568373 CASTOR2A6NHX0 329 aa18.86■□□□□ 0.61
SMPD3-211ENST00000568373 E7ESA3 106 aa18.86■□□□□ 0.61
SMPD3-211ENST00000568373 MGEA5O60502 916 aa18.86■□□□□ 0.61
SMPD3-211ENST00000568373 ELNP15502 786 aa18.86■□□□□ 0.61
SMPD3-211ENST00000568373 YWHAZP63104 245 aaKnown RBP18.86■□□□□ 0.61
SMPD3-211ENST00000568373 UPP1Q16831 310 aa18.86■□□□□ 0.61
SMPD3-211ENST00000568373 DEFB115Q30KQ5 88 aa18.86■□□□□ 0.61
SMPD3-211ENST00000568373 CCDC185Q8N715 623 aa18.86■□□□□ 0.61
SMPD3-211ENST00000568373 CREBZFQ9NS37 354 aa18.86■□□□□ 0.61
SMPD3-211ENST00000568373 KRT82Q9NSB4 513 aa18.86■□□□□ 0.61
SMPD3-211ENST00000568373 XPO7Q9UIA9 1087 aaKnown RBP18.86■□□□□ 0.61
SMPD3-211ENST00000568373 BCLAF3A2AJT9 711 aaKnown RBP18.85■□□□□ 0.61
SMPD3-211ENST00000568373 KCNN4O15554 427 aa18.85■□□□□ 0.61
SMPD3-211ENST00000568373 BANF1O75531 89 aa18.85■□□□□ 0.61
SMPD3-211ENST00000568373 ZFXP17010 805 aaPredicted RBP18.85■□□□□ 0.61
SMPD3-211ENST00000568373 SULT1E1P49888 294 aa18.85■□□□□ 0.61
SMPD3-211ENST00000568373 MAP3K7CLP57077 242 aa18.85■□□□□ 0.61
SMPD3-211ENST00000568373 MSS51Q4VC12 460 aa18.85■□□□□ 0.61
SMPD3-211ENST00000568373 TDRPQ86YL5 185 aa18.85■□□□□ 0.61
SMPD3-211ENST00000568373 SIX6OS1Q8N1H7 587 aa18.85■□□□□ 0.61
SMPD3-211ENST00000568373 KCTD15Q96SI1 283 aaPredicted RBP18.85■□□□□ 0.61
SMPD3-211ENST00000568373 UBN1Q9NPG3 1134 aa18.85■□□□□ 0.61
SMPD3-211ENST00000568373 PAK5Q9P286 719 aa18.85■□□□□ 0.61
SMPD3-211ENST00000568373 TIMM13Q9Y5L4 95 aaPredicted RBP18.85■□□□□ 0.61
SMPD3-211ENST00000568373 TMEM120BA0PK00 339 aa18.85■□□□□ 0.61
SMPD3-211ENST00000568373 ZBED1O96006 694 aa18.85■□□□□ 0.61
SMPD3-211ENST00000568373 CREB1P16220 341 aa18.85■□□□□ 0.61
SMPD3-211ENST00000568373 GCAP28676 217 aa18.85■□□□□ 0.61
SMPD3-211ENST00000568373 NDUFV1P49821 464 aa18.85■□□□□ 0.61
SMPD3-211ENST00000568373 DSC3Q14574 896 aa18.85■□□□□ 0.61
SMPD3-211ENST00000568373 LPIN1Q14693 890 aa18.85■□□□□ 0.61
SMPD3-211ENST00000568373 DCAF6Q58WW2 860 aa18.85■□□□□ 0.61
SMPD3-211ENST00000568373 VSTM1Q6UX27 236 aa18.85■□□□□ 0.61
SMPD3-211ENST00000568373 SPATS2Q86XZ4 545 aaKnown RBP18.85■□□□□ 0.61
SMPD3-211ENST00000568373 ANKMY2Q8IV38 441 aa18.85■□□□□ 0.61
SMPD3-211ENST00000568373 PDIK1LQ8N165 341 aa18.85■□□□□ 0.61
SMPD3-211ENST00000568373 PCSK9Q8NBP7 692 aaKnown RBP18.85■□□□□ 0.61
SMPD3-211ENST00000568373 PYROXD1Q8WU10 500 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms