RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 VNN1O95497 513 aa13.72□□□□□ -0.21
SF3B3-202ENST00000562722 TBX18O95935 607 aa13.72□□□□□ -0.21
SF3B3-202ENST00000562722 F13A1P00488 732 aa13.72□□□□□ -0.21
SF3B3-202ENST00000562722 NR3C1P04150 777 aa13.72□□□□□ -0.21
SF3B3-202ENST00000562722 RPN1P04843 607 aaKnown RBP13.72□□□□□ -0.21
SF3B3-202ENST00000562722 ZDHHC11BP0C7U3 371 aa13.72□□□□□ -0.21
SF3B3-202ENST00000562722 C1QTNF9P0C862 333 aa13.72□□□□□ -0.21
SF3B3-202ENST00000562722 FAM200BP0CF97 657 aa13.72□□□□□ -0.21
SF3B3-202ENST00000562722 ZSCAN22P10073 491 aaPredicted RBP13.72□□□□□ -0.21
SF3B3-202ENST00000562722 CHRM1P11229 460 aaPredicted RBP13.72□□□□□ -0.21
SF3B3-202ENST00000562722 ENGP17813 658 aa13.72□□□□□ -0.21
SF3B3-202ENST00000562722 GABRG2P18507 467 aa13.72□□□□□ -0.21
SF3B3-202ENST00000562722 ITPKAP23677 461 aa13.72□□□□□ -0.21
SF3B3-202ENST00000562722 NTSR1P30989 418 aa13.72□□□□□ -0.21
SF3B3-202ENST00000562722 ATP5C1P36542 298 aaKnown RBP13.72□□□□□ -0.21
SF3B3-202ENST00000562722 DLG4P78352 724 aa13.72□□□□□ -0.21
SF3B3-202ENST00000562722 SPDYCQ5MJ68 293 aa13.72□□□□□ -0.21
SF3B3-202ENST00000562722 KIAA1211LQ6NV74 962 aa13.72□□□□□ -0.21
SF3B3-202ENST00000562722 SLC36A4Q6YBV0 504 aa13.72□□□□□ -0.21
SF3B3-202ENST00000562722 TPGS1Q6ZTW0 290 aa13.72□□□□□ -0.21
SF3B3-202ENST00000562722 CHPFQ8IZ52 775 aa13.72□□□□□ -0.21
SF3B3-202ENST00000562722 C12orf29Q8N999 325 aa13.72□□□□□ -0.21
SF3B3-202ENST00000562722 KCNV2Q8TDN2 545 aa13.72□□□□□ -0.21
SF3B3-202ENST00000562722 TAF4BQ92750 862 aa13.72□□□□□ -0.21
SF3B3-202ENST00000562722 IL37Q9NZH6 218 aa13.72□□□□□ -0.21
SF3B3-202ENST00000562722 CALCOCO1Q9P1Z2 691 aa13.72□□□□□ -0.21
SF3B3-202ENST00000562722 FRMD4BQ9Y2L6 1034 aa13.72□□□□□ -0.21
SF3B3-202ENST00000562722 FAM92AA1XBS5 289 aa13.71□□□□□ -0.21
SF3B3-202ENST00000562722 CYP26A1O43174 497 aa13.71□□□□□ -0.21
SF3B3-202ENST00000562722 SLFN14P0C7P3 912 aa13.71□□□□□ -0.21
SF3B3-202ENST00000562722 TYRP14679 529 aa13.71□□□□□ -0.21
SF3B3-202ENST00000562722 PGFP49763 221 aa13.71□□□□□ -0.21
SF3B3-202ENST00000562722 CLDN10P78369 228 aa13.71□□□□□ -0.21
SF3B3-202ENST00000562722 STK4Q13043 487 aa13.71□□□□□ -0.21
SF3B3-202ENST00000562722 KMT5BQ4FZB7 885 aa13.71□□□□□ -0.21
SF3B3-202ENST00000562722 EGFLAMQ63HQ2 1017 aa13.71□□□□□ -0.21
SF3B3-202ENST00000562722 SPOPLQ6IQ16 392 aa13.71□□□□□ -0.21
SF3B3-202ENST00000562722 HTR3DQ70Z44 454 aa13.71□□□□□ -0.21
SF3B3-202ENST00000562722 UNC93AQ86WB7 457 aa13.71□□□□□ -0.21
SF3B3-202ENST00000562722 HSCBQ8IWL3 235 aa13.71□□□□□ -0.21
SF3B3-202ENST00000562722 HDDC3Q8N4P3 179 aa13.71□□□□□ -0.21
SF3B3-202ENST00000562722 KIAA0895Q8NCT3 520 aa13.71□□□□□ -0.21
SF3B3-202ENST00000562722 ZMIZ2Q8NF64 920 aa13.71□□□□□ -0.21
SF3B3-202ENST00000562722 BHMTQ93088 406 aa13.71□□□□□ -0.21
SF3B3-202ENST00000562722 ADAM33Q9BZ11 813 aa13.71□□□□□ -0.21
SF3B3-202ENST00000562722 IMPG2Q9BZV3 1241 aa13.71□□□□□ -0.21
SF3B3-202ENST00000562722 FSCN3Q9NQT6 498 aa13.71□□□□□ -0.21
SF3B3-202ENST00000562722 WDR35Q9P2L0 1181 aa13.71□□□□□ -0.21
SF3B3-202ENST00000562722 PILRBQ9UKJ0 227 aa13.71□□□□□ -0.21
SF3B3-202ENST00000562722 CFAP45Q9UL16 551 aa13.71□□□□□ -0.21
SF3B3-202ENST00000562722 CYP8B1Q9UNU6 501 aa13.71□□□□□ -0.21
SF3B3-202ENST00000562722 NUP205Q92621 2012 aa13.71□□□□□ -0.22
SF3B3-202ENST00000562722 CALUO43852 315 aaPredicted RBP13.7□□□□□ -0.22
SF3B3-202ENST00000562722 KLRC4O43908 158 aa13.7□□□□□ -0.22
SF3B3-202ENST00000562722 KIF20AO95235 890 aa13.7□□□□□ -0.22
SF3B3-202ENST00000562722 TOP3BO95985 862 aaKnown RBP13.7□□□□□ -0.22
SF3B3-202ENST00000562722 PDIA4P13667 645 aaKnown RBP13.7□□□□□ -0.22
SF3B3-202ENST00000562722 ACO1P21399 889 aaKnown RBP13.7□□□□□ -0.22
SF3B3-202ENST00000562722 HOXD12P35452 270 aa13.7□□□□□ -0.22
SF3B3-202ENST00000562722 ASPAP45381 313 aa13.7□□□□□ -0.22
SF3B3-202ENST00000562722 GFPT1Q06210 699 aaPredicted RBP13.7□□□□□ -0.22
SF3B3-202ENST00000562722 ZACNQ401N2 412 aa13.7□□□□□ -0.22
SF3B3-202ENST00000562722 C10orf120Q5SQS8 335 aa13.7□□□□□ -0.22
SF3B3-202ENST00000562722 SLC23A3Q6PIS1 610 aa13.7□□□□□ -0.22
SF3B3-202ENST00000562722 SV2AQ7L0J3 742 aa13.7□□□□□ -0.22
SF3B3-202ENST00000562722 GPRIN1Q7Z2K8 1008 aa13.7□□□□□ -0.22
SF3B3-202ENST00000562722 MIB1Q86YT6 1006 aa13.7□□□□□ -0.22
SF3B3-202ENST00000562722 SLC9A9Q8IVB4 645 aa13.7□□□□□ -0.22
SF3B3-202ENST00000562722 CRYBG2Q8N1P7 616 aa13.7□□□□□ -0.22
SF3B3-202ENST00000562722 CEP76Q8TAP6 659 aa13.7□□□□□ -0.22
SF3B3-202ENST00000562722 PAGE5Q96GU1 130 aa13.7□□□□□ -0.22
SF3B3-202ENST00000562722 DUSP9Q99956 384 aaKnown RBP13.7□□□□□ -0.22
SF3B3-202ENST00000562722 SCNM1Q9BWG6 230 aa13.7□□□□□ -0.22
SF3B3-202ENST00000562722 KLF16Q9BXK1 252 aaPredicted RBP13.7□□□□□ -0.22
SF3B3-202ENST00000562722 BACH2Q9BYV9 841 aa13.7□□□□□ -0.22
SF3B3-202ENST00000562722 DNAI2Q9GZS0 605 aa13.7□□□□□ -0.22
SF3B3-202ENST00000562722 CSNK1G1Q9HCP0 422 aa13.7□□□□□ -0.22
SF3B3-202ENST00000562722 DMAC2Q9NW81 257 aa13.7□□□□□ -0.22
SF3B3-202ENST00000562722 SLC6A14Q9UN76 642 aa13.7□□□□□ -0.22
SF3B3-202ENST00000562722 USP24Q9UPU5 2620 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 A0A1W2PQF6 199 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 A0A1W2PQH9 124 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 PDXKO00764 312 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 MDM4O15151 490 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 ACTN4O43707 911 aaKnown RBP13.69□□□□□ -0.22
SF3B3-202ENST00000562722 CACNG3O60359 315 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 NDUFS2O75306 463 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 ZNF217O75362 1048 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 ASS1P00966 412 aaKnown RBP13.69□□□□□ -0.22
SF3B3-202ENST00000562722 HLA-DRAP01903 254 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 RARGP13631 454 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 CD58P19256 250 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 NDUFV2P19404 249 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 DGKGP49619 791 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 ZNF33AQ06730 810 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 DUOXA1Q1HG43 343 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 ATL3Q6DD88 541 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 KIAA1324Q6UXG2 1013 aaKnown RBP13.69□□□□□ -0.22
SF3B3-202ENST00000562722 CLEC20AQ6ZU45 233 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 RABEPKQ7Z6M1 372 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms