RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 PPP1R2P3Q6NXS1 205 aa22.72■■□□□ 1.23
SNX1-206ENST00000559389 KLHDC10Q6PID8 442 aa22.72■■□□□ 1.23
SNX1-206ENST00000559389 TOGARAM2Q6ZUX3 1019 aa22.72■■□□□ 1.23
SNX1-206ENST00000559389 SLC26A9Q7LBE3 791 aa22.72■■□□□ 1.23
SNX1-206ENST00000559389 VPS36Q86VN1 386 aa22.72■■□□□ 1.23
SNX1-206ENST00000559389 XYLT1Q86Y38 959 aa22.72■■□□□ 1.23
SNX1-206ENST00000559389 GOLGA1Q92805 767 aa22.72■■□□□ 1.23
SNX1-206ENST00000559389 FGF14Q92915 247 aa22.72■■□□□ 1.23
SNX1-206ENST00000559389 USP13Q92995 863 aaPredicted RBP22.72■■□□□ 1.23
SNX1-206ENST00000559389 NECAB3Q96P71 396 aaPredicted RBP22.72■■□□□ 1.23
SNX1-206ENST00000559389 CYP2S1Q96SQ9 504 aa22.72■■□□□ 1.23
SNX1-206ENST00000559389 CDK5RAP1Q96SZ6 601 aaKnown RBP22.72■■□□□ 1.23
SNX1-206ENST00000559389 RNF38Q9H0F5 515 aa22.72■■□□□ 1.23
SNX1-206ENST00000559389 KIF9Q9HAQ2 790 aa22.72■■□□□ 1.23
SNX1-206ENST00000559389 ASNSD1Q9NWL6 643 aa22.72■■□□□ 1.23
SNX1-206ENST00000559389 TAS2R14Q9NYV8 317 aa22.72■■□□□ 1.23
SNX1-206ENST00000559389 IMPACTQ9P2X3 320 aa22.72■■□□□ 1.23
SNX1-206ENST00000559389 ARHGAP26Q9UNA1 814 aa22.72■■□□□ 1.23
SNX1-206ENST00000559389 NUMBLQ9Y6R0 609 aa22.72■■□□□ 1.23
SNX1-206ENST00000559389 SSU72P8A0A1W2PR75 194 aa22.71■■□□□ 1.23
SNX1-206ENST00000559389 ECI2O75521 394 aa22.71■■□□□ 1.23
SNX1-206ENST00000559389 GLI1P08151 1106 aa22.71■■□□□ 1.23
SNX1-206ENST00000559389 GSCP56915 257 aaPredicted RBP22.71■■□□□ 1.23
SNX1-206ENST00000559389 CDK17Q00537 523 aa22.71■■□□□ 1.23
SNX1-206ENST00000559389 USP4Q13107 963 aa22.71■■□□□ 1.23
SNX1-206ENST00000559389 MAPK8IP2Q13387 824 aaPredicted RBP22.71■■□□□ 1.23
SNX1-206ENST00000559389 BTBD8Q5XKL5 378 aa22.71■■□□□ 1.23
SNX1-206ENST00000559389 OR6B2Q6IFH4 312 aa22.71■■□□□ 1.23
SNX1-206ENST00000559389 ACAD10Q6JQN1 1059 aa22.71■■□□□ 1.23
SNX1-206ENST00000559389 BEND5Q7L4P6 421 aa22.71■■□□□ 1.23
SNX1-206ENST00000559389 TADA2BQ86TJ2 420 aa22.71■■□□□ 1.23
SNX1-206ENST00000559389 ST13P5Q8NFI4 369 aaPredicted RBP22.71■■□□□ 1.23
SNX1-206ENST00000559389 ELSPBP1Q96BH3 223 aa22.71■■□□□ 1.23
SNX1-206ENST00000559389 FAM149B1Q96BN6 582 aa22.71■■□□□ 1.23
SNX1-206ENST00000559389 RSPRY1Q96DX4 576 aa22.71■■□□□ 1.23
SNX1-206ENST00000559389 TRIM62Q9BVG3 475 aa22.71■■□□□ 1.23
SNX1-206ENST00000559389 ZFP14Q9HCL3 533 aa22.71■■□□□ 1.23
SNX1-206ENST00000559389 ABCC13Q9NSE7 274 aa22.71■■□□□ 1.23
SNX1-206ENST00000559389 TDP1Q9NUW8 608 aa22.71■■□□□ 1.23
SNX1-206ENST00000559389 OBP2AQ9NY56 170 aa22.71■■□□□ 1.23
SNX1-206ENST00000559389 LIMD1Q9UGP4 676 aa22.71■■□□□ 1.23
SNX1-206ENST00000559389 CCL26Q9Y258 94 aa22.71■■□□□ 1.23
SNX1-206ENST00000559389 HSF2BPO75031 334 aa22.7■■□□□ 1.22
SNX1-206ENST00000559389 CALB1P05937 261 aa22.7■■□□□ 1.22
SNX1-206ENST00000559389 FYNP06241 537 aa22.7■■□□□ 1.22
SNX1-206ENST00000559389 MBL2P11226 248 aaPredicted RBP22.7■■□□□ 1.22
SNX1-206ENST00000559389 GZMAP12544 262 aa22.7■■□□□ 1.22
SNX1-206ENST00000559389 ATP5C1P36542 298 aaKnown RBP22.7■■□□□ 1.22
SNX1-206ENST00000559389 EIF4A3P38919 411 aaKnown RBP22.7■■□□□ 1.22
SNX1-206ENST00000559389 VIPR2P41587 438 aa22.7■■□□□ 1.22
SNX1-206ENST00000559389 SLC6A3Q01959 620 aa22.7■■□□□ 1.22
SNX1-206ENST00000559389 C1QBPQ07021 282 aaKnown RBP22.7■■□□□ 1.22
SNX1-206ENST00000559389 C10orf120Q5SQS8 335 aa22.7■■□□□ 1.22
SNX1-206ENST00000559389 TANGO2Q6ICL3 276 aa22.7■■□□□ 1.22
SNX1-206ENST00000559389 MSANTD2Q6P1R3 559 aa22.7■■□□□ 1.22
SNX1-206ENST00000559389 RSRC2Q7L4I2 434 aaKnown RBP22.7■■□□□ 1.22
SNX1-206ENST00000559389 GJD3Q8N144 294 aa22.7■■□□□ 1.22
SNX1-206ENST00000559389 RIN3Q8TB24 985 aa22.7■■□□□ 1.22
SNX1-206ENST00000559389 EDEM1Q92611 657 aa22.7■■□□□ 1.22
SNX1-206ENST00000559389 NXPE3Q969Y0 559 aa22.7■■□□□ 1.22
SNX1-206ENST00000559389 E2F7Q96AV8 911 aa22.7■■□□□ 1.22
SNX1-206ENST00000559389 ZFRQ96KR1 1074 aaKnown RBP22.7■■□□□ 1.22
SNX1-206ENST00000559389 KXD1Q9BQD3 176 aa22.7■■□□□ 1.22
SNX1-206ENST00000559389 NACA2Q9H009 215 aa22.7■■□□□ 1.22
SNX1-206ENST00000559389 OLA1Q9NTK5 396 aaKnown RBP22.7■■□□□ 1.22
SNX1-206ENST00000559389 ADAM22Q9P0K1 906 aa22.7■■□□□ 1.22
SNX1-206ENST00000559389 IGSF9Q9P2J2 1179 aa22.7■■□□□ 1.22
SNX1-206ENST00000559389 ADAMTS1Q9UHI8 967 aa22.7■■□□□ 1.22
SNX1-206ENST00000559389 NUDT5Q9UKK9 219 aa22.7■■□□□ 1.22
SNX1-206ENST00000559389 STRIP2Q9ULQ0 834 aa22.7■■□□□ 1.22
SNX1-206ENST00000559389 NENFQ9UMX5 172 aa22.7■■□□□ 1.22
SNX1-206ENST00000559389 CPQQ9Y646 472 aa22.7■■□□□ 1.22
SNX1-206ENST00000559389 A0A087X0T9 212 aa22.69■■□□□ 1.22
SNX1-206ENST00000559389 DAB1O75553 588 aa22.69■■□□□ 1.22
SNX1-206ENST00000559389 TBX18O95935 607 aa22.69■■□□□ 1.22
SNX1-206ENST00000559389 FAM228BP0C875 321 aa22.69■■□□□ 1.22
SNX1-206ENST00000559389 TCF3P15923 654 aa22.69■■□□□ 1.22
SNX1-206ENST00000559389 MRE11P49959 708 aa22.69■■□□□ 1.22
SNX1-206ENST00000559389 TAF5Q15542 800 aa22.69■■□□□ 1.22
SNX1-206ENST00000559389 ASTE1Q2TB18 679 aaPredicted RBP22.69■■□□□ 1.22
SNX1-206ENST00000559389 EFHC1Q5JVL4 640 aa22.69■■□□□ 1.22
SNX1-206ENST00000559389 FAM102AQ5T9C2 384 aaPredicted RBP22.69■■□□□ 1.22
SNX1-206ENST00000559389 VITQ6UXI7 678 aa22.69■■□□□ 1.22
SNX1-206ENST00000559389 CELF5Q8N6W0 485 aaKnown RBP22.69■■□□□ 1.22
SNX1-206ENST00000559389 SPC24Q8NBT2 197 aa22.69■■□□□ 1.22
SNX1-206ENST00000559389 RSAD2Q8WXG1 361 aa22.69■■□□□ 1.22
SNX1-206ENST00000559389 SLC2A13Q96QE2 648 aa22.69■■□□□ 1.22
SNX1-206ENST00000559389 PANX2Q96RD6 677 aa22.69■■□□□ 1.22
SNX1-206ENST00000559389 CHP1Q99653 195 aa22.69■■□□□ 1.22
SNX1-206ENST00000559389 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.69■■□□□ 1.22
SNX1-206ENST00000559389 KCNK12Q9HB15 430 aa22.69■■□□□ 1.22
SNX1-206ENST00000559389 POPDC2Q9HBU9 364 aa22.69■■□□□ 1.22
SNX1-206ENST00000559389 CD320Q9NPF0 282 aa22.69■■□□□ 1.22
SNX1-206ENST00000559389 SMPD4Q9NXE4 827 aa22.69■■□□□ 1.22
SNX1-206ENST00000559389 WDR35Q9P2L0 1181 aa22.69■■□□□ 1.22
SNX1-206ENST00000559389 DNMT3LQ9UJW3 386 aa22.69■■□□□ 1.22
SNX1-206ENST00000559389 HEPACAM2A8MVW5 462 aa22.68■■□□□ 1.22
SNX1-206ENST00000559389 TMCO5BA8MYB1 307 aa22.68■■□□□ 1.22
SNX1-206ENST00000559389 MDM4O15151 490 aa22.68■■□□□ 1.22
SNX1-206ENST00000559389 ASGR2P07307 311 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 236.3 ms