RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 DGKIO75912 1065 aa14.37□□□□□ -0.11
TPM1-215ENST00000558868 F9P00740 461 aa14.37□□□□□ -0.11
TPM1-215ENST00000558868 MYBL2P10244 700 aa14.37□□□□□ -0.11
TPM1-215ENST00000558868 ZFXP17010 805 aaPredicted RBP14.37□□□□□ -0.11
TPM1-215ENST00000558868 RDXP35241 583 aaKnown RBP14.37□□□□□ -0.11
TPM1-215ENST00000558868 GRIK1P39086 918 aa14.37□□□□□ -0.11
TPM1-215ENST00000558868 KCNJ1P48048 391 aa14.37□□□□□ -0.11
TPM1-215ENST00000558868 NDUFV1P49821 464 aa14.37□□□□□ -0.11
TPM1-215ENST00000558868 ARSEP51690 589 aa14.37□□□□□ -0.11
TPM1-215ENST00000558868 AIF1P55008 147 aa14.37□□□□□ -0.11
TPM1-215ENST00000558868 KRT17Q04695 432 aa14.37□□□□□ -0.11
TPM1-215ENST00000558868 PTK6Q13882 451 aa14.37□□□□□ -0.11
TPM1-215ENST00000558868 BYSLQ13895 437 aaKnown RBP14.37□□□□□ -0.11
TPM1-215ENST00000558868 MFSD5Q6N075 450 aa14.37□□□□□ -0.11
TPM1-215ENST00000558868 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.37□□□□□ -0.11
TPM1-215ENST00000558868 CYP4V2Q6ZWL3 525 aaPredicted RBP14.37□□□□□ -0.11
TPM1-215ENST00000558868 ZNF365Q70YC5 407 aa14.37□□□□□ -0.11
TPM1-215ENST00000558868 CEP57Q86XR8 500 aa14.37□□□□□ -0.11
TPM1-215ENST00000558868 CCDC89Q8N998 374 aa14.37□□□□□ -0.11
TPM1-215ENST00000558868 BBOF1Q8ND07 529 aa14.37□□□□□ -0.11
TPM1-215ENST00000558868 FAM71BQ8TC56 605 aa14.37□□□□□ -0.11
TPM1-215ENST00000558868 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.37□□□□□ -0.11
TPM1-215ENST00000558868 C2orf15Q8WU43 125 aaKnown RBP14.37□□□□□ -0.11
TPM1-215ENST00000558868 NKD2Q969F2 451 aaPredicted RBP14.37□□□□□ -0.11
TPM1-215ENST00000558868 ACSF2Q96CM8 615 aaPredicted RBP14.37□□□□□ -0.11
TPM1-215ENST00000558868 LRRC45Q96CN5 670 aa14.37□□□□□ -0.11
TPM1-215ENST00000558868 C8orf48Q96LL4 319 aa14.37□□□□□ -0.11
TPM1-215ENST00000558868 TMEM209Q96SK2 561 aa14.37□□□□□ -0.11
TPM1-215ENST00000558868 SLC9A7Q96T83 725 aa14.37□□□□□ -0.11
TPM1-215ENST00000558868 HINFPQ9BQA5 517 aa14.37□□□□□ -0.11
TPM1-215ENST00000558868 ZNF670Q9BS34 389 aa14.37□□□□□ -0.11
TPM1-215ENST00000558868 TRIM51Q9BSJ1 452 aa14.37□□□□□ -0.11
TPM1-215ENST00000558868 SNRNP25Q9BV90 132 aaKnown RBP14.37□□□□□ -0.11
TPM1-215ENST00000558868 DPH5Q9H2P9 285 aa14.37□□□□□ -0.11
TPM1-215ENST00000558868 PLEKHA4Q9H4M7 779 aa14.37□□□□□ -0.11
TPM1-215ENST00000558868 OGFRQ9NZT2 677 aa14.37□□□□□ -0.11
TPM1-215ENST00000558868 R3HDM2Q9Y2K5 976 aaKnown RBP14.37□□□□□ -0.11
TPM1-215ENST00000558868 USP3Q9Y6I4 520 aa14.37□□□□□ -0.11
TPM1-215ENST00000558868 UNC80Q8N2C7 3258 aa14.37□□□□□ -0.11
TPM1-215ENST00000558868 TET1Q8NFU7 2136 aa14.36□□□□□ -0.11
TPM1-215ENST00000558868 BAIAP3O94812 1187 aa14.36□□□□□ -0.11
TPM1-215ENST00000558868 UPP2O95045 317 aa14.36□□□□□ -0.11
TPM1-215ENST00000558868 USP17L7P0C7H9 530 aa14.36□□□□□ -0.11
TPM1-215ENST00000558868 CACNA2D1P54289 1103 aa14.36□□□□□ -0.11
TPM1-215ENST00000558868 VCPP55072 806 aaKnown RBP14.36□□□□□ -0.11
TPM1-215ENST00000558868 CAV1Q03135 178 aa14.36□□□□□ -0.11
TPM1-215ENST00000558868 DEUP1Q05D60 604 aa14.36□□□□□ -0.11
TPM1-215ENST00000558868 CALCOCO2Q13137 446 aa14.36□□□□□ -0.11
TPM1-215ENST00000558868 DPYSL3Q14195 570 aa14.36□□□□□ -0.11
TPM1-215ENST00000558868 DPYSL2Q16555 572 aa14.36□□□□□ -0.11
TPM1-215ENST00000558868 GSTA5Q7RTV2 222 aa14.36□□□□□ -0.11
TPM1-215ENST00000558868 ANKS1BQ7Z6G8 1248 aa14.36□□□□□ -0.11
TPM1-215ENST00000558868 GSPT2Q8IYD1 628 aaKnown RBP14.36□□□□□ -0.11
TPM1-215ENST00000558868 MREGQ8N565 214 aa14.36□□□□□ -0.11
TPM1-215ENST00000558868 SPPL2BQ8TCT7 592 aa14.36□□□□□ -0.11
TPM1-215ENST00000558868 ATG4AQ8WYN0 398 aa14.36□□□□□ -0.11
TPM1-215ENST00000558868 TOP1MTQ969P6 601 aa14.36□□□□□ -0.11
TPM1-215ENST00000558868 PGAP3Q96FM1 320 aaPredicted RBP14.36□□□□□ -0.11
TPM1-215ENST00000558868 RNF157Q96PX1 679 aa14.36□□□□□ -0.11
TPM1-215ENST00000558868 TTPALQ9BTX7 342 aa14.36□□□□□ -0.11
TPM1-215ENST00000558868 GPR62Q9BZJ7 368 aa14.36□□□□□ -0.11
TPM1-215ENST00000558868 PCDH18Q9HCL0 1135 aa14.36□□□□□ -0.11
TPM1-215ENST00000558868 PRDM5Q9NQX1 630 aaPredicted RBP14.36□□□□□ -0.11
TPM1-215ENST00000558868 COMMD8Q9NX08 183 aa14.36□□□□□ -0.11
TPM1-215ENST00000558868 ABI2Q9NYB9 513 aaPredicted RBP14.36□□□□□ -0.11
TPM1-215ENST00000558868 WHRNQ9P202 907 aa14.36□□□□□ -0.11
TPM1-215ENST00000558868 RCOR3Q9P2K3 495 aaPredicted RBP14.36□□□□□ -0.11
TPM1-215ENST00000558868 MTRF1LQ9UGC7 380 aaKnown RBP14.36□□□□□ -0.11
TPM1-215ENST00000558868 ZNF148Q9UQR1 794 aa14.36□□□□□ -0.11
TPM1-215ENST00000558868 FNDC1Q4ZHG4 1894 aaPredicted RBP14.35□□□□□ -0.11
TPM1-215ENST00000558868 YJEFN3A6XGL0 299 aa14.35□□□□□ -0.11
TPM1-215ENST00000558868 E7ENQ6 273 aa14.35□□□□□ -0.11
TPM1-215ENST00000558868 APOC4-APOC2K7ER74 178 aa14.35□□□□□ -0.11
TPM1-215ENST00000558868 M0QYT0 321 aa14.35□□□□□ -0.11
TPM1-215ENST00000558868 APOC2P02655 101 aa14.35□□□□□ -0.11
TPM1-215ENST00000558868 ITGAVP06756 1048 aa14.35□□□□□ -0.11
TPM1-215ENST00000558868 ITIH2P19823 946 aa14.35□□□□□ -0.11
TPM1-215ENST00000558868 TGM2P21980 687 aa14.35□□□□□ -0.11
TPM1-215ENST00000558868 ZNF135P52742 658 aaPredicted RBP14.35□□□□□ -0.11
TPM1-215ENST00000558868 USP41Q3LFD5 358 aa14.35□□□□□ -0.11
TPM1-215ENST00000558868 ARL13BQ3SXY8 428 aa14.35□□□□□ -0.11
TPM1-215ENST00000558868 GPRIN1Q7Z2K8 1008 aa14.35□□□□□ -0.11
TPM1-215ENST00000558868 BNIPLQ7Z465 357 aa14.35□□□□□ -0.11
TPM1-215ENST00000558868 SCN4BQ8IWT1 228 aa14.35□□□□□ -0.11
TPM1-215ENST00000558868 CMTR2Q8IYT2 770 aaKnown RBP14.35□□□□□ -0.11
TPM1-215ENST00000558868 ARHGAP18Q8N392 663 aa14.35□□□□□ -0.11
TPM1-215ENST00000558868 NDRG1Q92597 394 aaKnown RBP14.35□□□□□ -0.11
TPM1-215ENST00000558868 NTAN1Q96AB6 310 aa14.35□□□□□ -0.11
TPM1-215ENST00000558868 RHOBTB2Q9BYZ6 727 aa14.35□□□□□ -0.11
TPM1-215ENST00000558868 TRIM31Q9BZY9 425 aa14.35□□□□□ -0.11
TPM1-215ENST00000558868 TSPYL1Q9H0U9 437 aa14.35□□□□□ -0.11
TPM1-215ENST00000558868 FBXO44Q9H4M3 255 aa14.35□□□□□ -0.11
TPM1-215ENST00000558868 TMEM30AQ9NV96 361 aa14.35□□□□□ -0.11
TPM1-215ENST00000558868 ASIC3Q9UHC3 531 aa14.35□□□□□ -0.11
TPM1-215ENST00000558868 AP4E1Q9UPM8 1137 aa14.35□□□□□ -0.11
TPM1-215ENST00000558868 SNX24Q9Y343 169 aa14.35□□□□□ -0.11
TPM1-215ENST00000558868 TRIM43BA6NCK2 446 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 APOL1O14791 398 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 MCF2LO15068 1137 aa14.34□□□□□ -0.11
TPM1-215ENST00000558868 CD48P09326 243 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms