RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 LCP1P13796 627 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 ABCB4P21439 1286 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 CTNNA1P35221 906 aaKnown RBP7.08□□□□□ -1.28
LINC00517-202ENST00000554257 MATKP42679 507 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 DLX2Q07687 328 aaPredicted RBP7.08□□□□□ -1.28
LINC00517-202ENST00000554257 TCEAL5Q5H9L2 206 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 MANEALQ5VSG8 457 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 KLHDC10Q6PID8 442 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 SPATA31D4Q6ZUB0 917 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 FAM217AQ8IXS0 508 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 EMC1Q8N766 993 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 SLC7A14Q8TBB6 771 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 WBP2Q969T9 261 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 HERPUD2Q9BSE4 406 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 MED10Q9BTT4 135 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 EMILIN2Q9BXX0 1053 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 PLEKHA4Q9H4M7 779 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 CLIC5Q9NZA1 410 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 ZNF212Q9UDV6 495 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 PUF60Q9UHX1 559 aaKnown RBP7.08□□□□□ -1.28
LINC00517-202ENST00000554257 NAALADL1Q9UQQ1 740 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 R3HCC1Q9Y3T6 440 aaKnown RBP7.08□□□□□ -1.28
LINC00517-202ENST00000554257 HSF2BPO75031 334 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 RFPL2O75678 378 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 TCF3P15923 654 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 GRIK1P39086 918 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 MARCKSL1P49006 195 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 TUFMP49411 452 aaKnown RBP7.08□□□□□ -1.28
LINC00517-202ENST00000554257 ATXN1P54253 815 aaKnown RBP7.08□□□□□ -1.28
LINC00517-202ENST00000554257 SCAPQ12770 1279 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 DENND5BQ6ZUT9 1274 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 TMC7Q7Z402 723 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 PHLDB2Q86SQ0 1253 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 VPS36Q86VN1 386 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 FCRL2Q96LA5 508 aaPredicted RBP7.08□□□□□ -1.28
LINC00517-202ENST00000554257 CFAP57Q96MR6 1250 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 PRMT1Q99873 361 aaKnown RBP7.08□□□□□ -1.28
LINC00517-202ENST00000554257 RNF38Q9H0F5 515 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 MYO1AQ9UBC5 1043 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 HESX1Q9UBX0 185 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 STOML2Q9UJZ1 356 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 TRIOO75962 3097 aa7.08□□□□□ -1.28
LINC00517-202ENST00000554257 PALMO75781 387 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 RTN3O95197 1032 aaPredicted RBP7.07□□□□□ -1.28
LINC00517-202ENST00000554257 GLUD1P00367 558 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 C8AP07357 584 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 HNRNPA1P09651 372 aaKnown RBP eCLIP7.07□□□□□ -1.28
LINC00517-202ENST00000554257 FCARP24071 287 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 IL4RP24394 825 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 YWHAGP61981 247 aaKnown RBP eCLIP7.07□□□□□ -1.28
LINC00517-202ENST00000554257 NNTQ13423 1086 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 C15orf59Q2T9L4 293 aaPredicted RBP7.07□□□□□ -1.28
LINC00517-202ENST00000554257 SLC25A52Q3SY17 297 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 PAPD7Q5XG87 772 aaKnown RBP7.07□□□□□ -1.28
LINC00517-202ENST00000554257 Q6ZNB5 142 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 ZNF572Q7Z3I7 529 aaPredicted RBP7.07□□□□□ -1.28
LINC00517-202ENST00000554257 DNAJB7Q7Z6W7 309 aaPredicted RBP7.07□□□□□ -1.28
LINC00517-202ENST00000554257 ZDHHC14Q8IZN3 488 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 SHKBP1Q8TBC3 707 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 GIPC2Q8TF65 315 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 SUSD6Q92537 303 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 ALG3Q92685 438 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 CASP10Q92851 521 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 FAF2Q96CS3 445 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 SLC22A12Q96S37 553 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 TBCBQ99426 244 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 MAGEB5Q9BZ81 275 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 DEF6Q9H4E7 631 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 NSUN3Q9H649 340 aaKnown RBP7.07□□□□□ -1.28
LINC00517-202ENST00000554257 SLC28A3Q9HAS3 691 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 POPDC2Q9HBU9 364 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 PIGVQ9NUD9 493 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 TRMT1Q9NXH9 659 aaKnown RBP7.07□□□□□ -1.28
LINC00517-202ENST00000554257 ASB3Q9Y575 518 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 SCINQ9Y6U3 715 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 TULP1O00294 542 aaPredicted RBP7.07□□□□□ -1.28
LINC00517-202ENST00000554257 BUB1O43683 1085 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 LTFP02788 710 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 PCK1P35558 622 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 NRIP1P48552 1158 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 CXCR3P49682 368 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 RPL10AP62906 217 aaKnown RBP7.07□□□□□ -1.28
LINC00517-202ENST00000554257 TAF10Q12962 218 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 ACAP1Q15027 740 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 SIX1Q15475 284 aaPredicted RBP7.07□□□□□ -1.28
LINC00517-202ENST00000554257 TSR1Q2NL82 804 aaKnown RBP7.07□□□□□ -1.28
LINC00517-202ENST00000554257 C5orf22Q49AR2 442 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 ANKRD54Q6NXT1 300 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 STRADAQ7RTN6 431 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 TAC4Q86UU9 113 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 DEFB106AQ8N104 65 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 RXFP2Q8WXD0 754 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 KRT35Q92764 455 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 KLF16Q9BXK1 252 aaPredicted RBP7.07□□□□□ -1.28
LINC00517-202ENST00000554257 PRKD2Q9BZL6 878 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 DNAI2Q9GZS0 605 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 LZTFL1Q9NQ48 299 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 C2orf78A6NCI8 922 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 SOBPA7XYQ1 873 aa7.07□□□□□ -1.28
LINC00517-202ENST00000554257 PTMAP06454 111 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms