RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 CA9Q16790 459 aa20.41■□□□□ 0.86
RBFOX1-215ENST00000553186 ZC3H12AQ5D1E8 599 aaKnown RBP20.41■□□□□ 0.86
RBFOX1-215ENST00000553186 EMBQ6PCB8 327 aa20.41■□□□□ 0.86
RBFOX1-215ENST00000553186 BBS12Q6ZW61 710 aa20.41■□□□□ 0.86
RBFOX1-215ENST00000553186 ZNF689Q96CS4 500 aaPredicted RBP20.41■□□□□ 0.86
RBFOX1-215ENST00000553186 CALN1Q9BXU9 219 aa20.41■□□□□ 0.86
RBFOX1-215ENST00000553186 RC3H2Q9HBD1 1191 aaKnown RBP20.41■□□□□ 0.86
RBFOX1-215ENST00000553186 GPATCH2LQ9NWQ4 482 aa20.41■□□□□ 0.86
RBFOX1-215ENST00000553186 ABI2Q9NYB9 513 aaPredicted RBP20.41■□□□□ 0.86
RBFOX1-215ENST00000553186 RASAL2Q9UJF2 1139 aa20.41■□□□□ 0.86
RBFOX1-215ENST00000553186 GRIK1P39086 918 aa20.4■□□□□ 0.86
RBFOX1-215ENST00000553186 ALDH7A1P49419 539 aaKnown RBP20.4■□□□□ 0.86
RBFOX1-215ENST00000553186 SULT1E1P49888 294 aa20.4■□□□□ 0.86
RBFOX1-215ENST00000553186 MMRN1Q13201 1228 aa20.4■□□□□ 0.86
RBFOX1-215ENST00000553186 CASP8Q14790 479 aa20.4■□□□□ 0.86
RBFOX1-215ENST00000553186 ERMARDQ5T6L9 678 aa20.4■□□□□ 0.86
RBFOX1-215ENST00000553186 DRICH1Q6PGQ1 229 aaPredicted RBP20.4■□□□□ 0.86
RBFOX1-215ENST00000553186 RSPO2Q6UXX9 243 aaPredicted RBP20.4■□□□□ 0.86
RBFOX1-215ENST00000553186 HDXQ7Z353 690 aa20.4■□□□□ 0.86
RBFOX1-215ENST00000553186 TMCO2Q7Z6W1 182 aaPredicted RBP20.4■□□□□ 0.86
RBFOX1-215ENST00000553186 ATL2Q8NHH9 583 aa20.4■□□□□ 0.86
RBFOX1-215ENST00000553186 SCAMP5Q8TAC9 235 aa20.4■□□□□ 0.86
RBFOX1-215ENST00000553186 FAM71BQ8TC56 605 aa20.4■□□□□ 0.86
RBFOX1-215ENST00000553186 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.4■□□□□ 0.86
RBFOX1-215ENST00000553186 IRGQQ8WZA9 623 aa20.4■□□□□ 0.86
RBFOX1-215ENST00000553186 TRIM31Q9BZY9 425 aa20.4■□□□□ 0.86
RBFOX1-215ENST00000553186 DPH5Q9H2P9 285 aa20.4■□□□□ 0.86
RBFOX1-215ENST00000553186 PTPRDP23468 1912 aa20.4■□□□□ 0.86
RBFOX1-215ENST00000553186 LIASO43766 372 aa20.39■□□□□ 0.86
RBFOX1-215ENST00000553186 CST8O60676 142 aa20.39■□□□□ 0.86
RBFOX1-215ENST00000553186 LTFP02788 710 aa20.39■□□□□ 0.86
RBFOX1-215ENST00000553186 FAM153BP0C7A2 387 aa20.39■□□□□ 0.86
RBFOX1-215ENST00000553186 PDK2Q15119 407 aa20.39■□□□□ 0.86
RBFOX1-215ENST00000553186 FAM153CQ494X1 144 aa20.39■□□□□ 0.86
RBFOX1-215ENST00000553186 UBE2Q1Q7Z7E8 422 aa20.39■□□□□ 0.86
RBFOX1-215ENST00000553186 CAVIN3Q969G5 261 aa20.39■□□□□ 0.86
RBFOX1-215ENST00000553186 NEUROG2Q9H2A3 272 aa20.39■□□□□ 0.86
RBFOX1-215ENST00000553186 FAM153AQ9UHL3 310 aa20.39■□□□□ 0.86
RBFOX1-215ENST00000553186 STAP1Q9ULZ2 295 aa20.39■□□□□ 0.86
RBFOX1-215ENST00000553186 NEU2Q9Y3R4 380 aa20.39■□□□□ 0.86
RBFOX1-215ENST00000553186 LTBP2Q14767 1821 aa20.39■□□□□ 0.85
RBFOX1-215ENST00000553186 SLC5A3P53794 718 aa20.39■□□□□ 0.85
RBFOX1-215ENST00000553186 WDR5P61964 334 aaKnown RBP20.39■□□□□ 0.85
RBFOX1-215ENST00000553186 RNF168Q8IYW5 571 aaPredicted RBP20.39■□□□□ 0.85
RBFOX1-215ENST00000553186 CCDC185Q8N715 623 aa20.39■□□□□ 0.85
RBFOX1-215ENST00000553186 TTPALQ9BTX7 342 aa20.39■□□□□ 0.85
RBFOX1-215ENST00000553186 PCDH18Q9HCL0 1135 aa20.39■□□□□ 0.85
RBFOX1-215ENST00000553186 FAM114A2Q9NRY5 505 aa20.39■□□□□ 0.85
RBFOX1-215ENST00000553186 DNPEPQ9ULA0 475 aa20.39■□□□□ 0.85
RBFOX1-215ENST00000553186 M0QYT0 321 aa20.38■□□□□ 0.85
RBFOX1-215ENST00000553186 AMHP03971 560 aa20.38■□□□□ 0.85
RBFOX1-215ENST00000553186 DPYSL2Q16555 572 aa20.38■□□□□ 0.85
RBFOX1-215ENST00000553186 VSTM1Q6UX27 236 aa20.38■□□□□ 0.85
RBFOX1-215ENST00000553186 SND1Q7KZF4 910 aaKnown RBP eCLIP20.38■□□□□ 0.85
RBFOX1-215ENST00000553186 FAM131BQ86XD5 332 aa20.38■□□□□ 0.85
RBFOX1-215ENST00000553186 VSIG1Q86XK7 387 aa20.38■□□□□ 0.85
RBFOX1-215ENST00000553186 MAP7D3Q8IWC1 876 aa20.38■□□□□ 0.85
RBFOX1-215ENST00000553186 TMEM199Q8N511 208 aa20.38■□□□□ 0.85
RBFOX1-215ENST00000553186 PGLYRP2Q96PD5 576 aa20.38■□□□□ 0.85
RBFOX1-215ENST00000553186 VN1R3Q9BXE9 311 aa20.38■□□□□ 0.85
RBFOX1-215ENST00000553186 FAM53CQ9NYF3 392 aa20.38■□□□□ 0.85
RBFOX1-215ENST00000553186 SAE1Q9UBE0 346 aaPredicted RBP20.38■□□□□ 0.85
RBFOX1-215ENST00000553186 FEZ2Q9UHY8 353 aaPredicted RBP20.38■□□□□ 0.85
RBFOX1-215ENST00000553186 ACRP10323 421 aa20.38■□□□□ 0.85
RBFOX1-215ENST00000553186 DYNLT1P63172 113 aa20.38■□□□□ 0.85
RBFOX1-215ENST00000553186 KRT17Q04695 432 aa20.38■□□□□ 0.85
RBFOX1-215ENST00000553186 HLTFQ14527 1009 aaKnown RBP eCLIP20.38■□□□□ 0.85
RBFOX1-215ENST00000553186 ANKS3Q6ZW76 656 aa20.38■□□□□ 0.85
RBFOX1-215ENST00000553186 ATAD1Q8NBU5 361 aa20.38■□□□□ 0.85
RBFOX1-215ENST00000553186 SLC35B2Q8TB61 432 aa20.38■□□□□ 0.85
RBFOX1-215ENST00000553186 GRK7Q8WTQ7 553 aa20.38■□□□□ 0.85
RBFOX1-215ENST00000553186 NKD2Q969F2 451 aaPredicted RBP20.38■□□□□ 0.85
RBFOX1-215ENST00000553186 HAUS1Q96CS2 278 aa20.38■□□□□ 0.85
RBFOX1-215ENST00000553186 IGSF21Q96ID5 467 aa20.38■□□□□ 0.85
RBFOX1-215ENST00000553186 MAGEB5Q9BZ81 275 aa20.38■□□□□ 0.85
RBFOX1-215ENST00000553186 MTMR10Q9NXD2 777 aa20.38■□□□□ 0.85
RBFOX1-215ENST00000553186 SNX24Q9Y343 169 aa20.38■□□□□ 0.85
RBFOX1-215ENST00000553186 PCDHB5Q9Y5E4 795 aa20.38■□□□□ 0.85
RBFOX1-215ENST00000553186 COL4A4P53420 1690 aaPredicted RBP20.37■□□□□ 0.85
RBFOX1-215ENST00000553186 CAPN9O14815 690 aa20.37■□□□□ 0.85
RBFOX1-215ENST00000553186 NCAM1P13591 858 aa20.37■□□□□ 0.85
RBFOX1-215ENST00000553186 L1CAMP32004 1257 aa20.37■□□□□ 0.85
RBFOX1-215ENST00000553186 RDXP35241 583 aaKnown RBP20.37■□□□□ 0.85
RBFOX1-215ENST00000553186 MAGEA11P43364 429 aa20.37■□□□□ 0.85
RBFOX1-215ENST00000553186 RPL21P46778 160 aaKnown RBP20.37■□□□□ 0.85
RBFOX1-215ENST00000553186 GPR17Q13304 367 aa20.37■□□□□ 0.85
RBFOX1-215ENST00000553186 BYSLQ13895 437 aaKnown RBP20.37■□□□□ 0.85
RBFOX1-215ENST00000553186 KRT81Q14533 505 aa20.37■□□□□ 0.85
RBFOX1-215ENST00000553186 OASLQ15646 514 aaKnown RBP20.37■□□□□ 0.85
RBFOX1-215ENST00000553186 BSPRYQ5W0U4 402 aa20.37■□□□□ 0.85
RBFOX1-215ENST00000553186 SYDE1Q6ZW31 735 aaPredicted RBP20.37■□□□□ 0.85
RBFOX1-215ENST00000553186 C8orf48Q96LL4 319 aa20.37■□□□□ 0.85
RBFOX1-215ENST00000553186 RNF157Q96PX1 679 aa20.37■□□□□ 0.85
RBFOX1-215ENST00000553186 PIGVQ9NUD9 493 aa20.37■□□□□ 0.85
RBFOX1-215ENST00000553186 GRHL1Q9NZI5 618 aa20.37■□□□□ 0.85
RBFOX1-215ENST00000553186 EFCAB14O75071 495 aa20.36■□□□□ 0.85
RBFOX1-215ENST00000553186 TNNT3P45378 269 aaPredicted RBP20.36■□□□□ 0.85
RBFOX1-215ENST00000553186 NNTQ13423 1086 aa20.36■□□□□ 0.85
RBFOX1-215ENST00000553186 PPP1R7Q15435 360 aa20.36■□□□□ 0.85
RBFOX1-215ENST00000553186 RFX6Q8HWS3 928 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms