RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 PPFIBP2Q8ND30 876 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 TMEM143Q96AN5 459 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 OXNAD1Q96HP4 312 aaPredicted RBP11.95□□□□□ -0.5
DDB1-224ENST00000545894 SERAC1Q96JX3 654 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 TARS2Q9BW92 718 aaKnown RBP11.95□□□□□ -0.5
DDB1-224ENST00000545894 UNC93B1Q9H1C4 597 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 HMX1Q9NP08 348 aaPredicted RBP11.95□□□□□ -0.5
DDB1-224ENST00000545894 DLGAP2Q9P1A6 1054 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 STX18Q9P2W9 335 aaKnown RBP11.95□□□□□ -0.5
DDB1-224ENST00000545894 SLC9A2Q9UBY0 812 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 STRIP2Q9ULQ0 834 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 POLIQ9UNA4 740 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 ASB3Q9Y575 518 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 ARID2Q68CP9 1835 aa11.95□□□□□ -0.5
DDB1-224ENST00000545894 LRRIQ4A6NIV6 560 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 A8MXQ7 604 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 FCHO1O14526 889 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 TBX10O75333 385 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 INHBAP08476 426 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 RARBP10826 455 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 MYL2P10916 166 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 KDELR1P24390 212 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 NAMPTP43490 491 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 ACTR2P61160 394 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 BASP1P80723 227 aaKnown RBP11.94□□□□□ -0.5
DDB1-224ENST00000545894 ZNF200P98182 395 aaPredicted RBP11.94□□□□□ -0.5
DDB1-224ENST00000545894 RCN2Q14257 317 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 TAZQ16635 292 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 ZNF394Q53GI3 561 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 SCARA3Q6AZY7 606 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 SLC30A9Q6PML9 568 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 UCMAQ8WVF2 138 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 WDR60Q8WVS4 1066 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 TEKT4Q8WW24 435 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 SLC44A1Q8WWI5 657 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 MCOLN1Q9GZU1 580 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 CNTN3Q9P232 1028 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 SCOCQ9UIL1 159 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 TCRBV9S1A1TA0A576 114 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 KLF11O14901 512 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 DYNC1LI2O43237 492 aaPredicted RBP11.94□□□□□ -0.5
DDB1-224ENST00000545894 LRCH4O75427 683 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 FARP2O94887 1054 aaPredicted RBP11.94□□□□□ -0.5
DDB1-224ENST00000545894 CST3P01034 146 aaPredicted RBP11.94□□□□□ -0.5
DDB1-224ENST00000545894 PYGBP11216 843 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 IL1R2P27930 398 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 RFC1P35251 1148 aaPredicted RBP11.94□□□□□ -0.5
DDB1-224ENST00000545894 ELK3P41970 407 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 SERPINB4P48594 390 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 AP3M2P53677 418 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 FAAP100Q0VG06 881 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 AP1B1Q10567 949 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 KCNT1Q5JUK3 1230 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 THEMIS2Q5TEJ8 643 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 ABHD15Q6UXT9 468 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 SH2D5Q6ZV89 423 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 IGDCC3Q8IVU1 814 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 PDCD7Q8N8D1 485 aaKnown RBP11.94□□□□□ -0.5
DDB1-224ENST00000545894 FAM71DQ8N9W8 422 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 OR6J1Q8NGC5 347 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 ZBTB10Q96DT7 871 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 CISHQ9NSE2 258 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 ZNF212Q9UDV6 495 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 PCDHGC3Q9UN70 934 aa11.94□□□□□ -0.5
DDB1-224ENST00000545894 CENPFP49454 3210 aa11.93□□□□□ -0.5
DDB1-224ENST00000545894 DUSP11O75319 330 aaKnown RBP11.93□□□□□ -0.5
DDB1-224ENST00000545894 SPAG6O75602 509 aa11.93□□□□□ -0.5
DDB1-224ENST00000545894 KRT3P12035 628 aa11.93□□□□□ -0.5
DDB1-224ENST00000545894 HARSP12081 509 aaKnown RBP11.93□□□□□ -0.5
DDB1-224ENST00000545894 CCL5P13501 91 aa11.93□□□□□ -0.5
DDB1-224ENST00000545894 PGM1P36871 562 aa11.93□□□□□ -0.5
DDB1-224ENST00000545894 RFC5P40937 340 aa11.93□□□□□ -0.5
DDB1-224ENST00000545894 EIF3EP60228 445 aaKnown RBP11.93□□□□□ -0.5
DDB1-224ENST00000545894 DPYSL3Q14195 570 aa11.93□□□□□ -0.5
DDB1-224ENST00000545894 HSDL1Q3SXM5 330 aa11.93□□□□□ -0.5
DDB1-224ENST00000545894 KBTBD12Q3ZCT8 623 aa11.93□□□□□ -0.5
DDB1-224ENST00000545894 SEZ6Q53EL9 994 aa11.93□□□□□ -0.5
DDB1-224ENST00000545894 METTL7BQ6UX53 244 aa11.93□□□□□ -0.5
DDB1-224ENST00000545894 TTC7BQ86TV6 843 aa11.93□□□□□ -0.5
DDB1-224ENST00000545894 TLK2Q86UE8 772 aa11.93□□□□□ -0.5
DDB1-224ENST00000545894 WDR49Q8IV35 697 aa11.93□□□□□ -0.5
DDB1-224ENST00000545894 ARFGAP1Q8N6T3 406 aa11.93□□□□□ -0.5
DDB1-224ENST00000545894 DTX3LQ8TDB6 740 aa11.93□□□□□ -0.5
DDB1-224ENST00000545894 TFAP2BQ92481 460 aa11.93□□□□□ -0.5
DDB1-224ENST00000545894 EMID1Q96A84 441 aaPredicted RBP11.93□□□□□ -0.5
DDB1-224ENST00000545894 ARMC5Q96C12 935 aa11.93□□□□□ -0.5
DDB1-224ENST00000545894 NIF3L1Q9GZT8 377 aa11.93□□□□□ -0.5
DDB1-224ENST00000545894 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.93□□□□□ -0.5
DDB1-224ENST00000545894 METTL5Q9NRN9 209 aaKnown RBP11.93□□□□□ -0.5
DDB1-224ENST00000545894 KIAA1217Q5T5P2 1943 aa11.93□□□□□ -0.5
DDB1-224ENST00000545894 FAM237BA0A1B0GVD1 139 aa11.93□□□□□ -0.5
DDB1-224ENST00000545894 C2orf71A6NGG8 1288 aa11.93□□□□□ -0.5
DDB1-224ENST00000545894 KBTBD13C9JR72 458 aa11.93□□□□□ -0.5
DDB1-224ENST00000545894 APOC4-APOC2K7ER74 178 aa11.93□□□□□ -0.5
DDB1-224ENST00000545894 MCF2LO15068 1137 aa11.93□□□□□ -0.5
DDB1-224ENST00000545894 MAP3K7O43318 606 aa11.93□□□□□ -0.5
DDB1-224ENST00000545894 APOC2P02655 101 aa11.93□□□□□ -0.5
DDB1-224ENST00000545894 POLR2BP30876 1174 aaKnown RBP11.93□□□□□ -0.5
DDB1-224ENST00000545894 RAP1GDS1P52306 607 aa11.93□□□□□ -0.5
DDB1-224ENST00000545894 MYL6P60660 151 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms