RNA–Protein interactions for RNA: ENST00000539409.5

FAM60A-206, Transcript of Protein FAM60A, humanhuman

TSL 1 (best) BASIC

Gene FAM60A, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-206ENST00000539409 SLC1A1P43005 524 aa11.95□□□□□ -0.5
FAM60A-206ENST00000539409 SH3PXD2AQ5TCZ1 1133 aa11.95□□□□□ -0.5
FAM60A-206ENST00000539409 OTUD1Q5VV17 481 aaPredicted RBP11.95□□□□□ -0.5
FAM60A-206ENST00000539409 BEND5Q7L4P6 421 aa11.95□□□□□ -0.5
FAM60A-206ENST00000539409 ARFGAP1Q8N6T3 406 aa11.95□□□□□ -0.5
FAM60A-206ENST00000539409 EDEM1Q92611 657 aa11.95□□□□□ -0.5
FAM60A-206ENST00000539409 GOLGA1Q92805 767 aa11.95□□□□□ -0.5
FAM60A-206ENST00000539409 CD101Q93033 1021 aa11.95□□□□□ -0.5
FAM60A-206ENST00000539409 NT5C3BQ969T7 300 aa11.95□□□□□ -0.5
FAM60A-206ENST00000539409 TRMT2BQ96GJ1 504 aaKnown RBP11.95□□□□□ -0.5
FAM60A-206ENST00000539409 NAPGQ99747 312 aaPredicted RBP11.95□□□□□ -0.5
FAM60A-206ENST00000539409 TRIM62Q9BVG3 475 aa11.95□□□□□ -0.5
FAM60A-206ENST00000539409 TLR10Q9BXR5 811 aa11.95□□□□□ -0.5
FAM60A-206ENST00000539409 PLEKHA4Q9H4M7 779 aa11.95□□□□□ -0.5
FAM60A-206ENST00000539409 HCFC2Q9Y5Z7 792 aa11.95□□□□□ -0.5
FAM60A-206ENST00000539409 CTAGE9A4FU28 777 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 SPOPO43791 374 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 LRCH4O75427 683 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 ZDHHC11BP0C7U3 371 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 NCAM1P13591 858 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 CASQ1P31415 396 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 NOS2P35228 1153 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 PITX1P78337 314 aaPredicted RBP11.94□□□□□ -0.5
FAM60A-206ENST00000539409 ATP11AP98196 1134 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 DUSP6Q16828 381 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 SLC25A52Q3SY17 297 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 RAB6CQ53S08 254 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 ZNF592Q92610 1267 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 HES6Q96HZ4 224 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 RAB6CQ9H0N0 254 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 TLE6Q9H808 572 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 RRAGDQ9NQL2 400 aaPredicted RBP11.94□□□□□ -0.5
FAM60A-206ENST00000539409 EHD2Q9NZN4 543 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 CALCOCO1Q9P1Z2 691 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 AMFRQ9UKV5 643 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 USTQ9Y2C2 406 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 CAPN9O14815 690 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 LRG1P02750 347 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 TCF4P15884 667 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 NRIP1P48552 1158 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 ACAP1Q15027 740 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 CDO1Q16878 200 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 RTL10Q7L3V2 364 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 BNIPLQ7Z465 357 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 DNAJB7Q7Z6W7 309 aaPredicted RBP11.94□□□□□ -0.5
FAM60A-206ENST00000539409 ITIH5Q86UX2 942 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 ARHGAP18Q8N392 663 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 FAM172AQ8WUF8 416 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 CENPIQ92674 756 aaPredicted RBP11.94□□□□□ -0.5
FAM60A-206ENST00000539409 SLITRK1Q96PX8 696 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 TBCBQ99426 244 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 NPY6RQ99463 290 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 ABCC13Q9NSE7 274 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 ASB3Q9Y575 518 aa11.94□□□□□ -0.5
FAM60A-206ENST00000539409 OBSL1O75147 1896 aa11.93□□□□□ -0.5
FAM60A-206ENST00000539409 RFPL2O75678 378 aa11.93□□□□□ -0.5
FAM60A-206ENST00000539409 ZMYND10O75800 440 aa11.93□□□□□ -0.5
FAM60A-206ENST00000539409 MARCKSL1P49006 195 aa11.93□□□□□ -0.5
FAM60A-206ENST00000539409 SULT1E1P49888 294 aa11.93□□□□□ -0.5
FAM60A-206ENST00000539409 TAS2R40P59535 323 aa11.93□□□□□ -0.5
FAM60A-206ENST00000539409 RBM10P98175 930 aaKnown RBP11.93□□□□□ -0.5
FAM60A-206ENST00000539409 PPM1LQ5SGD2 360 aa11.93□□□□□ -0.5
FAM60A-206ENST00000539409 BTBD8Q5XKL5 378 aa11.93□□□□□ -0.5
FAM60A-206ENST00000539409 OVCA2Q8WZ82 227 aa11.93□□□□□ -0.5
FAM60A-206ENST00000539409 KRT35Q92764 455 aa11.93□□□□□ -0.5
FAM60A-206ENST00000539409 TLR8Q9NR97 1041 aaKnown RBP11.93□□□□□ -0.5
FAM60A-206ENST00000539409 CLIC5Q9NZA1 410 aa11.93□□□□□ -0.5
FAM60A-206ENST00000539409 STAP1Q9ULZ2 295 aa11.93□□□□□ -0.5
FAM60A-206ENST00000539409 TADA3O75528 432 aa11.93□□□□□ -0.5
FAM60A-206ENST00000539409 HOXA9P31269 272 aa11.93□□□□□ -0.5
FAM60A-206ENST00000539409 CTNNA1P35221 906 aaKnown RBP11.93□□□□□ -0.5
FAM60A-206ENST00000539409 PSEN1P49768 467 aa11.93□□□□□ -0.5
FAM60A-206ENST00000539409 DNA2P51530 1060 aa11.93□□□□□ -0.5
FAM60A-206ENST00000539409 HDAC4P56524 1084 aa11.93□□□□□ -0.5
FAM60A-206ENST00000539409 SLC25A11Q02978 314 aaKnown RBP11.93□□□□□ -0.5
FAM60A-206ENST00000539409 KCNC3Q14003 757 aa11.93□□□□□ -0.5
FAM60A-206ENST00000539409 TAF12Q16514 161 aa11.93□□□□□ -0.5
FAM60A-206ENST00000539409 CC2D1AQ6P1N0 951 aaPredicted RBP11.93□□□□□ -0.5
FAM60A-206ENST00000539409 PDZD8Q8NEN9 1154 aa11.93□□□□□ -0.5
FAM60A-206ENST00000539409 VN1R2Q8NFZ6 395 aa11.93□□□□□ -0.5
FAM60A-206ENST00000539409 KIF18AQ8NI77 898 aa11.93□□□□□ -0.5
FAM60A-206ENST00000539409 HDAC7Q8WUI4 952 aa11.93□□□□□ -0.5
FAM60A-206ENST00000539409 TTYH1Q9H313 450 aaPredicted RBP11.93□□□□□ -0.5
FAM60A-206ENST00000539409 ZNF334Q9HCZ1 680 aaPredicted RBP11.93□□□□□ -0.5
FAM60A-206ENST00000539409 MIF4GDA9UHW6 222 aaKnown RBP11.92□□□□□ -0.5
FAM60A-206ENST00000539409 CCL16O15467 120 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 DDX3YO15523 660 aaKnown RBP11.92□□□□□ -0.5
FAM60A-206ENST00000539409 RNF8O76064 485 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 MIPP30301 263 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 GTF2F1P35269 517 aaKnown RBP eCLIP11.92□□□□□ -0.51e-7■■■■□ 23.4
FAM60A-206ENST00000539409 PCK1P35558 622 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 RPS6KA1Q15418 735 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 SNX30Q5VWJ9 437 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 PAPD7Q5XG87 772 aaKnown RBP11.92□□□□□ -0.5
FAM60A-206ENST00000539409 STRADAQ7RTN6 431 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 TMEM150AQ86TG1 271 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 TMC8Q8IU68 726 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 ADAM32Q8TC27 787 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 DQX1Q8TE96 717 aaKnown RBP11.92□□□□□ -0.5
FAM60A-206ENST00000539409 ZNF512Q96ME7 567 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms