RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 VCX3BQ9H321 246 aa12.04□□□□□ -0.48
USP35-207ENST00000530546 VCX3AQ9NNX9 186 aa12.04□□□□□ -0.48
USP35-207ENST00000530546 USP18Q9UMW8 372 aa12.04□□□□□ -0.48
USP35-207ENST00000530546 A0A1B0GVG6 124 aa12.04□□□□□ -0.48
USP35-207ENST00000530546 A6NJR5 290 aa12.04□□□□□ -0.48
USP35-207ENST00000530546 C3orf70A6NLC5 250 aaPredicted RBP12.04□□□□□ -0.48
USP35-207ENST00000530546 HOXD8P13378 290 aaPredicted RBP12.04□□□□□ -0.48
USP35-207ENST00000530546 CREB1P16220 341 aa12.04□□□□□ -0.48
USP35-207ENST00000530546 ATP5DP30049 168 aa12.04□□□□□ -0.48
USP35-207ENST00000530546 TRNP1Q6NT89 227 aa12.04□□□□□ -0.48
USP35-207ENST00000530546 BEST2Q8NFU1 509 aa12.04□□□□□ -0.48
USP35-207ENST00000530546 CKAP2Q8WWK9 683 aa12.04□□□□□ -0.48
USP35-207ENST00000530546 MRRFQ96E11 262 aaKnown RBP12.04□□□□□ -0.48
USP35-207ENST00000530546 SNX27Q96L92 541 aa12.04□□□□□ -0.48
USP35-207ENST00000530546 RNF39Q9H2S5 420 aa12.04□□□□□ -0.48
USP35-207ENST00000530546 DPEP3Q9H4B8 488 aa12.04□□□□□ -0.48
USP35-207ENST00000530546 SUDS3Q9H7L9 328 aaPredicted RBP12.04□□□□□ -0.48
USP35-207ENST00000530546 DCLRE1BQ9H816 532 aa12.04□□□□□ -0.48
USP35-207ENST00000530546 GOLGA2P5Q9HBQ8 144 aa12.04□□□□□ -0.48
USP35-207ENST00000530546 PDP2Q9P2J9 529 aa12.04□□□□□ -0.48
USP35-207ENST00000530546 STOML1Q9UBI4 398 aa12.04□□□□□ -0.48
USP35-207ENST00000530546 NME7Q9Y5B8 376 aa12.04□□□□□ -0.48
USP35-207ENST00000530546 NRCAMQ92823 1304 aa12.04□□□□□ -0.48
USP35-207ENST00000530546 DNALI1O14645 258 aaPredicted RBP12.03□□□□□ -0.48
USP35-207ENST00000530546 F2P00734 622 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 SKIP12755 728 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 DARSP14868 501 aaKnown RBP12.03□□□□□ -0.48
USP35-207ENST00000530546 GPD1P21695 349 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 NRLP54845 237 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 INCA1Q0VD86 236 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 ZRSR2Q15696 482 aaKnown RBP12.03□□□□□ -0.48
USP35-207ENST00000530546 CST9Q5W186 159 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 PMF1Q6P1K2 205 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 LCLAT1Q6UWP7 414 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 SCUBE3Q8IX30 993 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 CFAP57Q96MR6 1250 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 PEBP4Q96S96 227 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 MLXIPLQ9NP71 852 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 NGRNQ9NPE2 291 aaKnown RBP12.03□□□□□ -0.48
USP35-207ENST00000530546 GPATCH2LQ9NWQ4 482 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 ATXN10Q9UBB4 475 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 GJD2Q9UKL4 321 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 GNEQ9Y223 722 aaKnown RBP12.03□□□□□ -0.48
USP35-207ENST00000530546 SLC4A7Q9Y6M7 1214 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 NVLO15381 856 aaKnown RBP12.03□□□□□ -0.48
USP35-207ENST00000530546 TRUB2O95900 331 aaKnown RBP12.03□□□□□ -0.48
USP35-207ENST00000530546 PFKMP08237 780 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 ADORA2BP29275 332 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 MAGEA4P43358 317 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 PSEN2P49810 448 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 RASSF2P50749 326 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 ZNF157P51786 506 aaPredicted RBP12.03□□□□□ -0.48
USP35-207ENST00000530546 GDF10P55107 478 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 CDH6P55285 790 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 FASTKD3Q14CZ7 662 aaKnown RBP12.03□□□□□ -0.48
USP35-207ENST00000530546 SETDB1Q15047 1291 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 OASLQ15646 514 aaKnown RBP12.03□□□□□ -0.48
USP35-207ENST00000530546 NPNTQ6UXI9 565 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 POLNQ7Z5Q5 900 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 LCA5Q86VQ0 697 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 TTC30AQ86WT1 665 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 ZNF333Q96JL9 665 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 RMDN2Q96LZ7 410 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 CCDC28BQ9BUN5 200 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 B3GNT5Q9BYG0 378 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.03□□□□□ -0.48
USP35-207ENST00000530546 ASNSD1Q9NWL6 643 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 TMCO1Q9UM00 188 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 SCN4AP35499 1836 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 CENPFP49454 3210 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 A8MXQ7 604 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 BANF1O75531 89 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 VHLP40337 213 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 MTA1Q13330 715 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 LRRC14Q15048 493 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 PABPC1LQ4VXU2 614 aaKnown RBP12.03□□□□□ -0.48
USP35-207ENST00000530546 EXOC3L1Q86VI1 746 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 ANKRD42Q8N9B4 389 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 FAM13CQ8NE31 585 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 FNIP1Q8TF40 1166 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 PTPRN2Q92932 1015 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 ARHGEF2Q92974 986 aaKnown RBP12.03□□□□□ -0.48
USP35-207ENST00000530546 KCNK9Q9NPC2 374 aa12.03□□□□□ -0.48
USP35-207ENST00000530546 DOCK3Q8IZD9 2030 aa12.02□□□□□ -0.48
USP35-207ENST00000530546 MAP3K6O95382 1288 aa12.02□□□□□ -0.49
USP35-207ENST00000530546 ZNF865P0CJ78 1059 aaPredicted RBP12.02□□□□□ -0.49
USP35-207ENST00000530546 GABRB2P47870 512 aa12.02□□□□□ -0.49
USP35-207ENST00000530546 OCRLQ01968 901 aa12.02□□□□□ -0.49
USP35-207ENST00000530546 GAD2Q05329 585 aa12.02□□□□□ -0.49
USP35-207ENST00000530546 MORN1Q5T089 497 aa12.02□□□□□ -0.49
USP35-207ENST00000530546 SYCP2LQ5T4T6 812 aa12.02□□□□□ -0.49
USP35-207ENST00000530546 NT5DC4Q86YG4 428 aa12.02□□□□□ -0.49
USP35-207ENST00000530546 ZCCHC9Q8N567 271 aaKnown RBP12.02□□□□□ -0.49
USP35-207ENST00000530546 RSAD2Q8WXG1 361 aa12.02□□□□□ -0.49
USP35-207ENST00000530546 MAK16Q9BXY0 300 aaKnown RBP12.02□□□□□ -0.49
USP35-207ENST00000530546 UBE2OQ9C0C9 1292 aaKnown RBP12.02□□□□□ -0.49
USP35-207ENST00000530546 AP5M1Q9H0R1 490 aa12.02□□□□□ -0.49
USP35-207ENST00000530546 HESX1Q9UBX0 185 aa12.02□□□□□ -0.49
USP35-207ENST00000530546 DRG1Q9Y295 367 aaKnown RBP12.02□□□□□ -0.49
USP35-207ENST00000530546 SMIM35A0A1B0GVV1 85 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms