RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 CHST7Q9NS84 486 aa19.08■□□□□ 0.65
SDC2-202ENST00000518385 PHTF1Q9UMS5 762 aa19.08■□□□□ 0.65
SDC2-202ENST00000518385 SHOC2Q9UQ13 582 aa19.08■□□□□ 0.65
SDC2-202ENST00000518385 EXOC1LA0A1B0GW35 172 aa19.07■□□□□ 0.64
SDC2-202ENST00000518385 C2CD2LO14523 706 aa19.07■□□□□ 0.64
SDC2-202ENST00000518385 DNALI1O14645 258 aaPredicted RBP19.07■□□□□ 0.64
SDC2-202ENST00000518385 MICAL2O94851 1124 aa19.07■□□□□ 0.64
SDC2-202ENST00000518385 CTSHP09668 335 aa19.07■□□□□ 0.64
SDC2-202ENST00000518385 KRT3P12035 628 aa19.07■□□□□ 0.64
SDC2-202ENST00000518385 ATP6V1C1P21283 382 aa19.07■□□□□ 0.64
SDC2-202ENST00000518385 SSTR3P32745 418 aaPredicted RBP19.07■□□□□ 0.64
SDC2-202ENST00000518385 NDST1P52848 882 aa19.07■□□□□ 0.64
SDC2-202ENST00000518385 CCDC142Q17RM4 750 aa19.07■□□□□ 0.64
SDC2-202ENST00000518385 PTPN20Q4JDL3 420 aa19.07■□□□□ 0.64
SDC2-202ENST00000518385 UBXN11Q5T124 520 aa19.07■□□□□ 0.64
SDC2-202ENST00000518385 POLNQ7Z5Q5 900 aa19.07■□□□□ 0.64
SDC2-202ENST00000518385 PHLDB2Q86SQ0 1253 aa19.07■□□□□ 0.64
SDC2-202ENST00000518385 CPNE8Q86YQ8 564 aa19.07■□□□□ 0.64
SDC2-202ENST00000518385 GDAP1Q8TB36 358 aa19.07■□□□□ 0.64
SDC2-202ENST00000518385 ZMAT2Q96NC0 199 aaKnown RBP19.07■□□□□ 0.64
SDC2-202ENST00000518385 OSBPL8Q9BZF1 889 aa19.07■□□□□ 0.64
SDC2-202ENST00000518385 TRPV6Q9H1D0 765 aa19.07■□□□□ 0.64
SDC2-202ENST00000518385 DCLRE1BQ9H816 532 aa19.07■□□□□ 0.64
SDC2-202ENST00000518385 CHST12Q9NRB3 414 aa19.07■□□□□ 0.64
SDC2-202ENST00000518385 SPATS2LQ9NUQ6 558 aaKnown RBP19.07■□□□□ 0.64
SDC2-202ENST00000518385 STK38LQ9Y2H1 464 aa19.07■□□□□ 0.64
SDC2-202ENST00000518385 TROVE2P10155 538 aaKnown RBP eCLIP19.06■□□□□ 0.64
SDC2-202ENST00000518385 PAX7P23759 505 aa19.06■□□□□ 0.64
SDC2-202ENST00000518385 PTPN4P29074 926 aa19.06■□□□□ 0.64
SDC2-202ENST00000518385 GPD2P43304 727 aa19.06■□□□□ 0.64
SDC2-202ENST00000518385 LBX1P52954 281 aa19.06■□□□□ 0.64
SDC2-202ENST00000518385 RPL7AP62424 266 aaKnown RBP19.06■□□□□ 0.64
SDC2-202ENST00000518385 PPARDQ03181 441 aa19.06■□□□□ 0.64
SDC2-202ENST00000518385 MGAT5Q09328 741 aa19.06■□□□□ 0.64
SDC2-202ENST00000518385 UBAP2Q5T6F2 1119 aaKnown RBP19.06■□□□□ 0.64
SDC2-202ENST00000518385 C9orf57Q5W0N0 161 aa19.06■□□□□ 0.64
SDC2-202ENST00000518385 LLGL2Q6P1M3 1020 aa19.06■□□□□ 0.64
SDC2-202ENST00000518385 ZNF333Q96JL9 665 aa19.06■□□□□ 0.64
SDC2-202ENST00000518385 MCEEQ96PE7 176 aa19.06■□□□□ 0.64
SDC2-202ENST00000518385 TWNKQ96RR1 684 aa19.06■□□□□ 0.64
SDC2-202ENST00000518385 RBM15Q96T37 977 aaKnown RBP eCLIP19.06■□□□□ 0.641e-6■□□□□ 11.3
SDC2-202ENST00000518385 CRISPLD2Q9H0B8 497 aa19.06■□□□□ 0.64
SDC2-202ENST00000518385 MYLK2Q9H1R3 596 aa19.06■□□□□ 0.64
SDC2-202ENST00000518385 TRABDQ9H4I3 376 aa19.06■□□□□ 0.64
SDC2-202ENST00000518385 SYNCQ9H7C4 482 aa19.06■□□□□ 0.64
SDC2-202ENST00000518385 GDAP2Q9NXN4 497 aa19.06■□□□□ 0.64
SDC2-202ENST00000518385 ZFATQ9P243 1243 aa19.06■□□□□ 0.64
SDC2-202ENST00000518385 ST3GAL5Q9UNP4 418 aa19.06■□□□□ 0.64
SDC2-202ENST00000518385 PIRO00625 290 aa19.06■□□□□ 0.64
SDC2-202ENST00000518385 FOXN2P32314 431 aa19.06■□□□□ 0.64
SDC2-202ENST00000518385 PHBP35232 272 aa19.06■□□□□ 0.64
SDC2-202ENST00000518385 WDR4P57081 412 aaKnown RBP19.06■□□□□ 0.64
SDC2-202ENST00000518385 PSMC1P62191 440 aaKnown RBP19.06■□□□□ 0.64
SDC2-202ENST00000518385 HACE1Q8IYU2 909 aa19.06■□□□□ 0.64
SDC2-202ENST00000518385 SPDL1Q96EA4 605 aa19.06■□□□□ 0.64
SDC2-202ENST00000518385 MCRS1Q96EZ8 462 aa19.06■□□□□ 0.64
SDC2-202ENST00000518385 SMIM28A0A1B0GU29 152 aa19.05■□□□□ 0.64
SDC2-202ENST00000518385 M0QYV0 167 aa19.05■□□□□ 0.64
SDC2-202ENST00000518385 GPR182O15218 404 aa19.05■□□□□ 0.64
SDC2-202ENST00000518385 ALOX15BO15296 676 aa19.05■□□□□ 0.64
SDC2-202ENST00000518385 TM9SF1O15321 606 aa19.05■□□□□ 0.64
SDC2-202ENST00000518385 TJP3O95049 919 aa19.05■□□□□ 0.64
SDC2-202ENST00000518385 IL1BP01584 269 aa19.05■□□□□ 0.64
SDC2-202ENST00000518385 CREB1P16220 341 aa19.05■□□□□ 0.64
SDC2-202ENST00000518385 CTCFP49711 727 aaPredicted RBP19.05■□□□□ 0.64
SDC2-202ENST00000518385 TAS2R40P59535 323 aa19.05■□□□□ 0.64
SDC2-202ENST00000518385 SNX1Q13596 522 aa19.05■□□□□ 0.64
SDC2-202ENST00000518385 TMED2Q15363 201 aa19.05■□□□□ 0.64
SDC2-202ENST00000518385 HADHQ16836 314 aaKnown RBP19.05■□□□□ 0.64
SDC2-202ENST00000518385 FBXO47Q5MNV8 452 aa19.05■□□□□ 0.64
SDC2-202ENST00000518385 CENPUQ71F23 418 aa19.05■□□□□ 0.64
SDC2-202ENST00000518385 XYLT1Q86Y38 959 aa19.05■□□□□ 0.64
SDC2-202ENST00000518385 KIF2BQ8N4N8 673 aa19.05■□□□□ 0.64
SDC2-202ENST00000518385 ARMC5Q96C12 935 aa19.05■□□□□ 0.64
SDC2-202ENST00000518385 ERP27Q96DN0 273 aa19.05■□□□□ 0.64
SDC2-202ENST00000518385 NXF3Q9H4D5 531 aaKnown RBP19.05■□□□□ 0.64
SDC2-202ENST00000518385 PSMC3IPQ9P2W1 217 aaPredicted RBP19.05■□□□□ 0.64
SDC2-202ENST00000518385 STOML1Q9UBI4 398 aa19.05■□□□□ 0.64
SDC2-202ENST00000518385 USTQ9Y2C2 406 aa19.05■□□□□ 0.64
SDC2-202ENST00000518385 EFR3BQ9Y2G0 817 aa19.05■□□□□ 0.64
SDC2-202ENST00000518385 SNX9Q9Y5X1 595 aa19.05■□□□□ 0.64
SDC2-202ENST00000518385 SQORQ9Y6N5 450 aa19.05■□□□□ 0.64
SDC2-202ENST00000518385 PDCD11Q14690 1871 aaKnown RBP19.05■□□□□ 0.64
SDC2-202ENST00000518385 AHCYL1O43865 530 aa19.04■□□□□ 0.64
SDC2-202ENST00000518385 PEX11AO75192 247 aa19.04■□□□□ 0.64
SDC2-202ENST00000518385 ATP5BP06576 529 aaKnown RBP19.04■□□□□ 0.64
SDC2-202ENST00000518385 KRT7P08729 469 aa19.04■□□□□ 0.64
SDC2-202ENST00000518385 CKBP12277 381 aa19.04■□□□□ 0.64
SDC2-202ENST00000518385 SSR1P43307 286 aaKnown RBP19.04■□□□□ 0.64
SDC2-202ENST00000518385 ZNF618Q5T7W0 954 aa19.04■□□□□ 0.64
SDC2-202ENST00000518385 HHATQ5VTY9 493 aa19.04■□□□□ 0.64
SDC2-202ENST00000518385 FAM91A1Q658Y4 838 aa19.04■□□□□ 0.64
SDC2-202ENST00000518385 ARHGAP17Q68EM7 881 aa19.04■□□□□ 0.64
SDC2-202ENST00000518385 DPH6Q7L8W6 267 aa19.04■□□□□ 0.64
SDC2-202ENST00000518385 CYP4X1Q8N118 509 aa19.04■□□□□ 0.64
SDC2-202ENST00000518385 C10orf82Q8WW14 230 aa19.04■□□□□ 0.64
SDC2-202ENST00000518385 MMADHCQ9H3L0 296 aaPredicted RBP19.04■□□□□ 0.64
SDC2-202ENST00000518385 AGO3Q9H9G7 860 aaKnown RBP19.04■□□□□ 0.64
SDC2-202ENST00000518385 CYLDQ9NQC7 956 aa19.04■□□□□ 0.64
SDC2-202ENST00000518385 HMGXB4Q9UGU5 601 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms