RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 H3BQV1 296 aa9.78□□□□□ -0.84
PTPN20-216ENST00000506080 J3QL48 77 aa9.78□□□□□ -0.84
PTPN20-216ENST00000506080 TULP3O75386 442 aa9.78□□□□□ -0.84
PTPN20-216ENST00000506080 GCNT3O95395 438 aa9.78□□□□□ -0.84
PTPN20-216ENST00000506080 ZIC2O95409 532 aaPredicted RBP9.78□□□□□ -0.84
PTPN20-216ENST00000506080 LDHAP00338 332 aaKnown RBP9.78□□□□□ -0.84
PTPN20-216ENST00000506080 GARTP22102 1010 aa9.78□□□□□ -0.84
PTPN20-216ENST00000506080 NTSR1P30989 418 aa9.78□□□□□ -0.84
PTPN20-216ENST00000506080 PPP3CCP48454 512 aa9.78□□□□□ -0.84
PTPN20-216ENST00000506080 CACNA2D1P54289 1103 aa9.78□□□□□ -0.84
PTPN20-216ENST00000506080 MYO1EQ12965 1108 aa9.78□□□□□ -0.84
PTPN20-216ENST00000506080 MAPRE1Q15691 268 aaKnown RBP9.78□□□□□ -0.84
PTPN20-216ENST00000506080 ANO4Q32M45 955 aa9.78□□□□□ -0.84
PTPN20-216ENST00000506080 TDRD10Q5VZ19 366 aaKnown RBP9.78□□□□□ -0.84
PTPN20-216ENST00000506080 BTBD8Q5XKL5 378 aa9.78□□□□□ -0.84
PTPN20-216ENST00000506080 DPH6Q7L8W6 267 aa9.78□□□□□ -0.84
PTPN20-216ENST00000506080 TRMT11Q7Z4G4 463 aaKnown RBP9.78□□□□□ -0.84
PTPN20-216ENST00000506080 DDX42Q86XP3 938 aaKnown RBP eCLIP9.78□□□□□ -0.84
PTPN20-216ENST00000506080 MIB1Q86YT6 1006 aa9.78□□□□□ -0.84
PTPN20-216ENST00000506080 NAXDQ8IW45 347 aa9.78□□□□□ -0.84
PTPN20-216ENST00000506080 ETFBKMTQ8IXQ9 262 aa9.78□□□□□ -0.84
PTPN20-216ENST00000506080 SYCP3Q8IZU3 236 aa9.78□□□□□ -0.84
PTPN20-216ENST00000506080 KIAA1958Q8N8K9 716 aa9.78□□□□□ -0.84
PTPN20-216ENST00000506080 OR5B17Q8NGF7 314 aa9.78□□□□□ -0.84
PTPN20-216ENST00000506080 ADAMTS14Q8WXS8 1223 aa9.78□□□□□ -0.84
PTPN20-216ENST00000506080 HPDLQ96IR7 371 aa9.78□□□□□ -0.84
PTPN20-216ENST00000506080 CEP295NLQ96MC4 621 aa9.78□□□□□ -0.84
PTPN20-216ENST00000506080 SLITRK1Q96PX8 696 aa9.78□□□□□ -0.84
PTPN20-216ENST00000506080 ACOX2Q99424 681 aa9.78□□□□□ -0.84
PTPN20-216ENST00000506080 SLC6A17Q9H1V8 727 aa9.78□□□□□ -0.84
PTPN20-216ENST00000506080 CD93Q9NPY3 652 aa9.78□□□□□ -0.84
PTPN20-216ENST00000506080 TMEM30AQ9NV96 361 aa9.78□□□□□ -0.84
PTPN20-216ENST00000506080 EHD2Q9NZN4 543 aa9.78□□□□□ -0.84
PTPN20-216ENST00000506080 TBC1D14Q9P2M4 693 aa9.78□□□□□ -0.84
PTPN20-216ENST00000506080 DEC1Q9P2X7 70 aa9.78□□□□□ -0.84
PTPN20-216ENST00000506080 HCN2Q9UL51 889 aa9.78□□□□□ -0.84
PTPN20-216ENST00000506080 FREM2Q5SZK8 3169 aa9.78□□□□□ -0.84
PTPN20-216ENST00000506080 MYO18AQ92614 2054 aaKnown RBP9.78□□□□□ -0.84
PTPN20-216ENST00000506080 PTPRJQ12913 1337 aa9.77□□□□□ -0.85
PTPN20-216ENST00000506080 LAMA5O15230 3695 aa9.77□□□□□ -0.85
PTPN20-216ENST00000506080 A0A1W2PQD8 194 aa9.77□□□□□ -0.85
PTPN20-216ENST00000506080 A0A1W2PQF6 199 aa9.77□□□□□ -0.85
PTPN20-216ENST00000506080 E2F8A0AVK6 867 aa9.77□□□□□ -0.85
PTPN20-216ENST00000506080 GJB3O75712 270 aa9.77□□□□□ -0.85
PTPN20-216ENST00000506080 TNNC2P02585 160 aa9.77□□□□□ -0.85
PTPN20-216ENST00000506080 IRF1P10914 325 aa9.77□□□□□ -0.85
PTPN20-216ENST00000506080 WARSP23381 471 aaKnown RBP9.77□□□□□ -0.85
PTPN20-216ENST00000506080 MAOBP27338 520 aa9.77□□□□□ -0.85
PTPN20-216ENST00000506080 LONP1P36776 959 aaKnown RBP9.77□□□□□ -0.85
PTPN20-216ENST00000506080 CASP5P51878 434 aa9.77□□□□□ -0.85
PTPN20-216ENST00000506080 NOP14P78316 857 aaKnown RBP9.77□□□□□ -0.85
PTPN20-216ENST00000506080 EGFLAMQ63HQ2 1017 aa9.77□□□□□ -0.85
PTPN20-216ENST00000506080 CCNI2Q6ZMN8 369 aaPredicted RBP9.77□□□□□ -0.85
PTPN20-216ENST00000506080 USP49Q70CQ1 688 aa9.77□□□□□ -0.85
PTPN20-216ENST00000506080 LIMS2Q7Z4I7 341 aa9.77□□□□□ -0.85
PTPN20-216ENST00000506080 TMEM25Q86YD3 366 aa9.77□□□□□ -0.85
PTPN20-216ENST00000506080 TERB1Q8NA31 727 aa9.77□□□□□ -0.85
PTPN20-216ENST00000506080 MYCBPAPQ8TBZ2 947 aa9.77□□□□□ -0.85
PTPN20-216ENST00000506080 WBP2Q969T9 261 aa9.77□□□□□ -0.85
PTPN20-216ENST00000506080 C8orf48Q96LL4 319 aa9.77□□□□□ -0.85
PTPN20-216ENST00000506080 BBC3Q96PG8 261 aaPredicted RBP9.77□□□□□ -0.85
PTPN20-216ENST00000506080 FGFBP2Q9BYJ0 223 aa9.77□□□□□ -0.85
PTPN20-216ENST00000506080 SNX25Q9H3E2 840 aa9.77□□□□□ -0.85
PTPN20-216ENST00000506080 INTS13Q9NVM9 706 aa9.77□□□□□ -0.85
PTPN20-216ENST00000506080 RAXQ9Y2V3 346 aa9.77□□□□□ -0.85
PTPN20-216ENST00000506080 SH3BP1Q9Y3L3 701 aa9.77□□□□□ -0.85
PTPN20-216ENST00000506080 KIF3AQ9Y496 699 aa9.77□□□□□ -0.85
PTPN20-216ENST00000506080 NME7Q9Y5B8 376 aa9.77□□□□□ -0.85
PTPN20-216ENST00000506080 RAD54BQ9Y620 910 aa9.77□□□□□ -0.85
PTPN20-216ENST00000506080 CLDN5O00501 218 aa9.76□□□□□ -0.85
PTPN20-216ENST00000506080 HOXC11O43248 304 aaPredicted RBP9.76□□□□□ -0.85
PTPN20-216ENST00000506080 COCHO43405 550 aa9.76□□□□□ -0.85
PTPN20-216ENST00000506080 NDUFS2O75306 463 aa9.76□□□□□ -0.85
PTPN20-216ENST00000506080 ZNF217O75362 1048 aa9.76□□□□□ -0.85
PTPN20-216ENST00000506080 IDEP14735 1019 aa9.76□□□□□ -0.85
PTPN20-216ENST00000506080 YWHAQP27348 245 aa9.76□□□□□ -0.85
PTPN20-216ENST00000506080 GJB2P29033 226 aa9.76□□□□□ -0.85
PTPN20-216ENST00000506080 GNL1P36915 607 aaPredicted RBP9.76□□□□□ -0.85
PTPN20-216ENST00000506080 SLC14A1Q13336 389 aa9.76□□□□□ -0.85
PTPN20-216ENST00000506080 SLCO6A1Q86UG4 719 aa9.76□□□□□ -0.85
PTPN20-216ENST00000506080 BBS7Q8IWZ6 715 aa9.76□□□□□ -0.85
PTPN20-216ENST00000506080 CHPFQ8IZ52 775 aa9.76□□□□□ -0.85
PTPN20-216ENST00000506080 GPD1LQ8N335 351 aa9.76□□□□□ -0.85
PTPN20-216ENST00000506080 OR6B3Q8NGW1 331 aa9.76□□□□□ -0.85
PTPN20-216ENST00000506080 IPO4Q8TEX9 1081 aaKnown RBP9.76□□□□□ -0.85
PTPN20-216ENST00000506080 FBXO32Q969P5 355 aa9.76□□□□□ -0.85
PTPN20-216ENST00000506080 DNAJC19Q96DA6 116 aa9.76□□□□□ -0.85
PTPN20-216ENST00000506080 OTUB2Q96DC9 234 aa9.76□□□□□ -0.85
PTPN20-216ENST00000506080 EPSTI1Q96J88 318 aa9.76□□□□□ -0.85
PTPN20-216ENST00000506080 LRIG1Q96JA1 1093 aa9.76□□□□□ -0.85
PTPN20-216ENST00000506080 MRPL45Q9BRJ2 306 aaKnown RBP9.76□□□□□ -0.85
PTPN20-216ENST00000506080 ZNF518BQ9C0D4 1074 aa9.76□□□□□ -0.85
PTPN20-216ENST00000506080 DPEP3Q9H4B8 488 aa9.76□□□□□ -0.85
PTPN20-216ENST00000506080 SPHK2Q9NRA0 654 aa9.76□□□□□ -0.85
PTPN20-216ENST00000506080 SEL1LQ9UBV2 794 aa9.76□□□□□ -0.85
PTPN20-216ENST00000506080 CHORDC1Q9UHD1 332 aaPredicted RBP9.76□□□□□ -0.85
PTPN20-216ENST00000506080 APOBEC2Q9Y235 224 aaKnown RBP9.76□□□□□ -0.85
PTPN20-216ENST00000506080 PLXNB3Q9ULL4 1909 aa9.75□□□□□ -0.85
PTPN20-216ENST00000506080 EIF4E1BA6NMX2 242 aaKnown RBP9.75□□□□□ -0.85
PTPN20-216ENST00000506080 EIF5BO60841 1220 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms