RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 STEAP1Q9UHE8 339 aa4.01□□□□□ -1.77
NF1-213ENST00000489712 AFG3L2Q9Y4W6 797 aa4.01□□□□□ -1.77
NF1-213ENST00000489712 KRTAP29-1A8MX34 341 aaPredicted RBP4□□□□□ -1.77
NF1-213ENST00000489712 H3BNC9 293 aa4□□□□□ -1.77
NF1-213ENST00000489712 MYF5P13349 255 aa4□□□□□ -1.77
NF1-213ENST00000489712 ADRA1DP25100 572 aa4□□□□□ -1.77
NF1-213ENST00000489712 NR4A2P43354 598 aa4□□□□□ -1.77
NF1-213ENST00000489712 CFHR3Q02985 330 aa4□□□□□ -1.77
NF1-213ENST00000489712 GBX1Q14549 363 aa4□□□□□ -1.77
NF1-213ENST00000489712 GRM3Q14832 879 aa4□□□□□ -1.77
NF1-213ENST00000489712 CLCA4Q14CN2 919 aa4□□□□□ -1.77
NF1-213ENST00000489712 GFOD2Q3B7J2 385 aa4□□□□□ -1.77
NF1-213ENST00000489712 UNC13DQ70J99 1090 aa4□□□□□ -1.77
NF1-213ENST00000489712 PNPLA1Q8N8W4 532 aa4□□□□□ -1.77
NF1-213ENST00000489712 MAP4K1Q92918 833 aa4□□□□□ -1.77
NF1-213ENST00000489712 COQ8BQ96D53 544 aa4□□□□□ -1.77
NF1-213ENST00000489712 HIST1H2AAQ96QV6 131 aa4□□□□□ -1.77
NF1-213ENST00000489712 BTBD1Q9H0C5 482 aa4□□□□□ -1.77
NF1-213ENST00000489712 GAR1Q9NY12 217 aaKnown RBP4□□□□□ -1.77
NF1-213ENST00000489712 ZNF212Q9UDV6 495 aa4□□□□□ -1.77
NF1-213ENST00000489712 FRMPD2Q68DX3 1309 aaPredicted RBP3.99□□□□□ -1.77
NF1-213ENST00000489712 AGPSO00116 658 aa3.99□□□□□ -1.77
NF1-213ENST00000489712 ADAM10O14672 748 aa3.99□□□□□ -1.77
NF1-213ENST00000489712 RPL17P18621 184 aaKnown RBP3.99□□□□□ -1.77
NF1-213ENST00000489712 MCM5P33992 734 aa3.99□□□□□ -1.77
NF1-213ENST00000489712 EIF4A1P60842 406 aaKnown RBP3.99□□□□□ -1.77
NF1-213ENST00000489712 KCNAB1Q14722 419 aa3.99□□□□□ -1.77
NF1-213ENST00000489712 MFSD13AQ14CX5 517 aa3.99□□□□□ -1.77
NF1-213ENST00000489712 TMTC4Q5T4D3 741 aa3.99□□□□□ -1.77
NF1-213ENST00000489712 PLAG1Q6DJT9 500 aa3.99□□□□□ -1.77
NF1-213ENST00000489712 RANBP10Q6VN20 620 aa3.99□□□□□ -1.77
NF1-213ENST00000489712 USP49Q70CQ1 688 aa3.99□□□□□ -1.77
NF1-213ENST00000489712 LIX1LQ8IVB5 337 aa3.99□□□□□ -1.77
NF1-213ENST00000489712 C16orf71Q8IYS4 520 aaPredicted RBP3.99□□□□□ -1.77
NF1-213ENST00000489712 METTL25Q8N6Q8 603 aa3.99□□□□□ -1.77
NF1-213ENST00000489712 C12orf76Q8N812 135 aaPredicted RBP3.99□□□□□ -1.77
NF1-213ENST00000489712 C16orf52Q8NHV5 167 aa3.99□□□□□ -1.77
NF1-213ENST00000489712 ZDHHC12Q96GR4 267 aa3.99□□□□□ -1.77
NF1-213ENST00000489712 PRDM11Q9NQV5 511 aa3.99□□□□□ -1.77
NF1-213ENST00000489712 MTMR4Q9NYA4 1195 aa3.99□□□□□ -1.77
NF1-213ENST00000489712 DKK4Q9UBT3 224 aa3.99□□□□□ -1.77
NF1-213ENST00000489712 VPS51Q9UID3 782 aa3.99□□□□□ -1.77
NF1-213ENST00000489712 CLIC1O00299 241 aa3.98□□□□□ -1.77
NF1-213ENST00000489712 IKBKBO14920 756 aa3.98□□□□□ -1.77
NF1-213ENST00000489712 KCNAB3O43448 404 aa3.98□□□□□ -1.77
NF1-213ENST00000489712 MT-ND5P03915 603 aa3.98□□□□□ -1.77
NF1-213ENST00000489712 RHCEP18577 417 aa3.98□□□□□ -1.77
NF1-213ENST00000489712 NTSR1P30989 418 aa3.98□□□□□ -1.77
NF1-213ENST00000489712 POLGP54098 1239 aaPredicted RBP3.98□□□□□ -1.77
NF1-213ENST00000489712 RHDQ02161 417 aa3.98□□□□□ -1.77
NF1-213ENST00000489712 ID2Q02363 134 aa3.98□□□□□ -1.77
NF1-213ENST00000489712 CFHR1Q03591 330 aa3.98□□□□□ -1.77
NF1-213ENST00000489712 ZNF91Q05481 1191 aa3.98□□□□□ -1.77
NF1-213ENST00000489712 SEC23BQ15437 767 aa3.98□□□□□ -1.77
NF1-213ENST00000489712 ZNF260Q3ZCT1 412 aa3.98□□□□□ -1.77
NF1-213ENST00000489712 C10orf25Q5T742 122 aa3.98□□□□□ -1.77
NF1-213ENST00000489712 AWAT2Q6E213 333 aa3.98□□□□□ -1.77
NF1-213ENST00000489712 CLEC9AQ6UXN8 241 aa3.98□□□□□ -1.77
NF1-213ENST00000489712 BHLHA9Q7RTU4 235 aa3.98□□□□□ -1.77
NF1-213ENST00000489712 P3H2Q8IVL5 708 aa3.98□□□□□ -1.77
NF1-213ENST00000489712 SDR16C5Q8N3Y7 309 aa3.98□□□□□ -1.77
NF1-213ENST00000489712 C11orf44Q8N8P7 122 aa3.98□□□□□ -1.77
NF1-213ENST00000489712 NRACQ8N912 160 aa3.98□□□□□ -1.77
NF1-213ENST00000489712 MBD3L2Q8NHZ7 208 aaPredicted RBP3.98□□□□□ -1.77
NF1-213ENST00000489712 EDC3Q96F86 508 aaKnown RBP3.98□□□□□ -1.77
NF1-213ENST00000489712 SNX22Q96L94 193 aa3.98□□□□□ -1.77
NF1-213ENST00000489712 USP29Q9HBJ7 922 aa3.98□□□□□ -1.77
NF1-213ENST00000489712 G3BP2Q9UN86 482 aaKnown RBP3.98□□□□□ -1.77
NF1-213ENST00000489712 HPSEQ9Y251 543 aa3.98□□□□□ -1.77
NF1-213ENST00000489712 SETD1BQ9UPS6 1966 aaKnown RBP3.98□□□□□ -1.77
NF1-213ENST00000489712 MYMKA6NI61 221 aa3.97□□□□□ -1.77
NF1-213ENST00000489712 FOXN3O00409 490 aaPredicted RBP3.97□□□□□ -1.77
NF1-213ENST00000489712 ANXA2P07355 339 aaKnown RBP3.97□□□□□ -1.77
NF1-213ENST00000489712 TMEM191BP0C7N4 346 aa3.97□□□□□ -1.77
NF1-213ENST00000489712 TMEM225BP0DP42 221 aa3.97□□□□□ -1.77
NF1-213ENST00000489712 BTF3P20290 206 aaKnown RBP3.97□□□□□ -1.77
NF1-213ENST00000489712 TACR3P29371 465 aa3.97□□□□□ -1.77
NF1-213ENST00000489712 THBS4P35443 961 aa3.97□□□□□ -1.77
NF1-213ENST00000489712 COPAP53621 1224 aa3.97□□□□□ -1.77
NF1-213ENST00000489712 RPS13P62277 151 aaKnown RBP3.97□□□□□ -1.77
NF1-213ENST00000489712 GPC5P78333 572 aa3.97□□□□□ -1.77
NF1-213ENST00000489712 DEUP1Q05D60 604 aa3.97□□□□□ -1.77
NF1-213ENST00000489712 SLC14A1Q13336 389 aa3.97□□□□□ -1.77
NF1-213ENST00000489712 SEMA5AQ13591 1074 aa3.97□□□□□ -1.77
NF1-213ENST00000489712 RBMS2Q15434 407 aaKnown RBP3.97□□□□□ -1.77
NF1-213ENST00000489712 LCE1AQ5T7P2 110 aa3.97□□□□□ -1.77
NF1-213ENST00000489712 MANEALQ5VSG8 457 aa3.97□□□□□ -1.77
NF1-213ENST00000489712 ANKRD13AQ8IZ07 590 aa3.97□□□□□ -1.77
NF1-213ENST00000489712 FSTL5Q8N475 847 aaPredicted RBP3.97□□□□□ -1.77
NF1-213ENST00000489712 SIGLEC11Q96RL6 698 aa3.97□□□□□ -1.77
NF1-213ENST00000489712 STRBPQ96SI9 672 aaKnown RBP3.97□□□□□ -1.77
NF1-213ENST00000489712 CINPQ9BW66 212 aaPredicted RBP3.97□□□□□ -1.77
NF1-213ENST00000489712 BRIP1Q9BX63 1249 aa3.97□□□□□ -1.77
NF1-213ENST00000489712 UNKQ9C0B0 810 aaKnown RBP3.97□□□□□ -1.77
NF1-213ENST00000489712 PNPLA8Q9NP80 782 aa3.97□□□□□ -1.77
NF1-213ENST00000489712 HEYLQ9NQ87 328 aaPredicted RBP3.97□□□□□ -1.77
NF1-213ENST00000489712 ASAP1Q9ULH1 1129 aa3.97□□□□□ -1.77
NF1-213ENST00000489712 CAPN11Q9UMQ6 739 aa3.97□□□□□ -1.77
NF1-213ENST00000489712 SLC27A6Q9Y2P4 619 aa3.97□□□□□ -1.77
NF1-213ENST00000489712 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms