RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 LEFTY2O00292 366 aa11.35□□□□□ -0.59
ATG4B-219ENST00000479941 PIK3R2O00459 728 aa11.35□□□□□ -0.59
ATG4B-219ENST00000479941 PAPSS1O43252 624 aaPredicted RBP11.35□□□□□ -0.59
ATG4B-219ENST00000479941 TBX18O95935 607 aa11.35□□□□□ -0.59
ATG4B-219ENST00000479941 MMEP08473 750 aa11.35□□□□□ -0.59
ATG4B-219ENST00000479941 ZXDBP98169 803 aa11.35□□□□□ -0.59
ATG4B-219ENST00000479941 FMO1Q01740 532 aa11.35□□□□□ -0.59
ATG4B-219ENST00000479941 GOLGA8FQ08AF8 430 aa11.35□□□□□ -0.59
ATG4B-219ENST00000479941 GOLGA8DPQ0D2H9 430 aa11.35□□□□□ -0.59
ATG4B-219ENST00000479941 USP4Q13107 963 aa11.35□□□□□ -0.59
ATG4B-219ENST00000479941 C10orf120Q5SQS8 335 aa11.35□□□□□ -0.59
ATG4B-219ENST00000479941 SFMBT2Q5VUG0 894 aa11.35□□□□□ -0.59
ATG4B-219ENST00000479941 BSPRYQ5W0U4 402 aa11.35□□□□□ -0.59
ATG4B-219ENST00000479941 TRIM72Q6ZMU5 477 aa11.35□□□□□ -0.59
ATG4B-219ENST00000479941 RSRC2Q7L4I2 434 aaKnown RBP11.35□□□□□ -0.59
ATG4B-219ENST00000479941 BEND5Q7L4P6 421 aa11.35□□□□□ -0.59
ATG4B-219ENST00000479941 IRF2BP2Q7Z5L9 587 aa11.35□□□□□ -0.59
ATG4B-219ENST00000479941 ZDHHC17Q8IUH5 632 aa11.35□□□□□ -0.59
ATG4B-219ENST00000479941 MSANTD4Q8NCY6 345 aa11.35□□□□□ -0.59
ATG4B-219ENST00000479941 CLEC4CQ8WTT0 213 aa11.35□□□□□ -0.59
ATG4B-219ENST00000479941 RNF139Q8WU17 664 aa11.35□□□□□ -0.59
ATG4B-219ENST00000479941 SLC20A1Q8WUM9 679 aa11.35□□□□□ -0.59
ATG4B-219ENST00000479941 NDRG1Q92597 394 aaKnown RBP11.35□□□□□ -0.59
ATG4B-219ENST00000479941 CPXM1Q96SM3 734 aa11.35□□□□□ -0.59
ATG4B-219ENST00000479941 RBSNQ9H1K0 784 aa11.35□□□□□ -0.59
ATG4B-219ENST00000479941 SMOC2Q9H3U7 446 aa11.35□□□□□ -0.59
ATG4B-219ENST00000479941 EPHX3Q9H6B9 360 aa11.35□□□□□ -0.59
ATG4B-219ENST00000479941 SYNCQ9H7C4 482 aa11.35□□□□□ -0.59
ATG4B-219ENST00000479941 SMPD4Q9NXE4 827 aa11.35□□□□□ -0.59
ATG4B-219ENST00000479941 AIPL1Q9NZN9 384 aa11.35□□□□□ -0.59
ATG4B-219ENST00000479941 FBXL21Q9UKT6 434 aa11.35□□□□□ -0.59
ATG4B-219ENST00000479941 MYO16Q9Y6X6 1858 aa11.35□□□□□ -0.59
ATG4B-219ENST00000479941 ARNTLO00327 626 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 LTFP02788 710 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 CYP1A1P04798 512 aaPredicted RBP11.34□□□□□ -0.59
ATG4B-219ENST00000479941 GLI1P08151 1106 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 CHRNB2P17787 502 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 GABRB2P47870 512 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 YWHAZP63104 245 aaKnown RBP11.34□□□□□ -0.59
ATG4B-219ENST00000479941 NOMO3P69849 1222 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 COG7P83436 770 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 ZBED6P86452 979 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 EFEMP1Q12805 493 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 TRIM14Q14142 442 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 PDGFRLQ15198 375 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 ASIC2Q16515 512 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 PTPN20Q4JDL3 420 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 EFHC1Q5JVL4 640 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 SPECC1LQ69YQ0 1117 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 ERICH1Q86X53 443 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 GAS2L3Q86XJ1 694 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 VSTM4Q8IW00 320 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 TTC16Q8NEE8 873 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 CSGALNACT1Q8TDX6 532 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 OSCP1Q8WVF1 389 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 SYN2Q92777 582 aaPredicted RBP11.34□□□□□ -0.59
ATG4B-219ENST00000479941 FAM149B1Q96BN6 582 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 ASIC4Q96FT7 647 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 ZFRQ96KR1 1074 aaKnown RBP11.34□□□□□ -0.59
ATG4B-219ENST00000479941 AGPAT1Q99943 283 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 FAM83CQ9BQN1 747 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 C1QTNF1Q9BXJ1 281 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 KLF16Q9BXK1 252 aaPredicted RBP11.34□□□□□ -0.59
ATG4B-219ENST00000479941 TRIM5Q9C035 493 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 ASNSD1Q9NWL6 643 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 NUDT5Q9UKK9 219 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 STRIP2Q9ULQ0 834 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 CAPN11Q9UMQ6 739 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 LUC7L2Q9Y383 392 aaKnown RBP11.34□□□□□ -0.59
ATG4B-219ENST00000479941 SH3BP1Q9Y3L3 701 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 TECTAO75443 2155 aa11.34□□□□□ -0.59
ATG4B-219ENST00000479941 E2F8A0AVK6 867 aa11.33□□□□□ -0.6
ATG4B-219ENST00000479941 SLC9A3R1O14745 358 aaPredicted RBP11.33□□□□□ -0.6
ATG4B-219ENST00000479941 CAPN9O14815 690 aa11.33□□□□□ -0.6
ATG4B-219ENST00000479941 GYPCP04921 128 aa11.33□□□□□ -0.6
ATG4B-219ENST00000479941 UNGP13051 313 aaPredicted RBP11.33□□□□□ -0.6
ATG4B-219ENST00000479941 PRKCIP41743 596 aa11.33□□□□□ -0.6
ATG4B-219ENST00000479941 IFNAR2P48551 515 aa11.33□□□□□ -0.6
ATG4B-219ENST00000479941 MLLT6P55198 1093 aaPredicted RBP11.33□□□□□ -0.6
ATG4B-219ENST00000479941 SLC6A3Q01959 620 aa11.33□□□□□ -0.6
ATG4B-219ENST00000479941 PRKCQQ04759 706 aa11.33□□□□□ -0.6
ATG4B-219ENST00000479941 SLC44A4Q53GD3 710 aa11.33□□□□□ -0.6
ATG4B-219ENST00000479941 OR6B2Q6IFH4 312 aa11.33□□□□□ -0.6
ATG4B-219ENST00000479941 PPP1R2P3Q6NXS1 205 aa11.33□□□□□ -0.6
ATG4B-219ENST00000479941 TOGARAM2Q6ZUX3 1019 aa11.33□□□□□ -0.6
ATG4B-219ENST00000479941 HFE2Q6ZVN8 426 aa11.33□□□□□ -0.6
ATG4B-219ENST00000479941 MIB1Q86YT6 1006 aa11.33□□□□□ -0.6
ATG4B-219ENST00000479941 RIN3Q8TB24 985 aa11.33□□□□□ -0.6
ATG4B-219ENST00000479941 CPLX3Q8WVH0 158 aa11.33□□□□□ -0.6
ATG4B-219ENST00000479941 CPA5Q8WXQ8 436 aa11.33□□□□□ -0.6
ATG4B-219ENST00000479941 EDEM1Q92611 657 aa11.33□□□□□ -0.6
ATG4B-219ENST00000479941 OTUB2Q96DC9 234 aa11.33□□□□□ -0.6
ATG4B-219ENST00000479941 C18orf8Q96DM3 657 aa11.33□□□□□ -0.6
ATG4B-219ENST00000479941 SHDQ96IW2 340 aa11.33□□□□□ -0.6
ATG4B-219ENST00000479941 ZFYVE19Q96K21 471 aa11.33□□□□□ -0.6
ATG4B-219ENST00000479941 HAUS4Q9H6D7 363 aa11.33□□□□□ -0.6
ATG4B-219ENST00000479941 POPDC2Q9HBU9 364 aa11.33□□□□□ -0.6
ATG4B-219ENST00000479941 ARHGEF3Q9NR81 526 aa11.33□□□□□ -0.6
ATG4B-219ENST00000479941 GKN1Q9NS71 199 aa11.33□□□□□ -0.6
ATG4B-219ENST00000479941 DUS2Q9NX74 493 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms