RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 CCDC114Q96M63 670 aa23.05■■□□□ 1.28
VSX1-205ENST00000429762 MCOLN1Q9GZU1 580 aa23.05■■□□□ 1.28
VSX1-205ENST00000429762 POPDC2Q9HBU9 364 aa23.05■■□□□ 1.28
VSX1-205ENST00000429762 FAM153AQ9UHL3 310 aa23.05■■□□□ 1.28
VSX1-205ENST00000429762 UTP11Q9Y3A2 253 aaKnown RBP23.05■■□□□ 1.28
VSX1-205ENST00000429762 DESP17661 470 aa23.05■■□□□ 1.28
VSX1-205ENST00000429762 TNFRSF8P28908 595 aa23.05■■□□□ 1.28
VSX1-205ENST00000429762 ALDH7A1P49419 539 aaKnown RBP23.05■■□□□ 1.28
VSX1-205ENST00000429762 ARSEP51690 589 aa23.05■■□□□ 1.28
VSX1-205ENST00000429762 SLC5A3P53794 718 aa23.05■■□□□ 1.28
VSX1-205ENST00000429762 NME3Q13232 169 aa23.05■■□□□ 1.28
VSX1-205ENST00000429762 DPYSL3Q14195 570 aa23.05■■□□□ 1.28
VSX1-205ENST00000429762 SLC25A52Q3SY17 297 aa23.05■■□□□ 1.28
VSX1-205ENST00000429762 TMEM199Q8N511 208 aa23.05■■□□□ 1.28
VSX1-205ENST00000429762 SNX24Q9Y343 169 aa23.05■■□□□ 1.28
VSX1-205ENST00000429762 FAM187AA6NFU0 413 aa23.04■■□□□ 1.28
VSX1-205ENST00000429762 M0QYT0 321 aa23.04■■□□□ 1.28
VSX1-205ENST00000429762 CAPN9O14815 690 aa23.04■■□□□ 1.28
VSX1-205ENST00000429762 CST8O60676 142 aa23.04■■□□□ 1.28
VSX1-205ENST00000429762 CAPN15O75808 1086 aa23.04■■□□□ 1.28
VSX1-205ENST00000429762 LTFP02788 710 aa23.04■■□□□ 1.28
VSX1-205ENST00000429762 CPB1P15086 417 aa23.04■■□□□ 1.28
VSX1-205ENST00000429762 NOS2P35228 1153 aa23.04■■□□□ 1.28
VSX1-205ENST00000429762 HLTFQ14527 1009 aaKnown RBP eCLIP23.04■■□□□ 1.28
VSX1-205ENST00000429762 SND1Q7KZF4 910 aaKnown RBP eCLIP23.04■■□□□ 1.28
VSX1-205ENST00000429762 PRUNE1Q86TP1 453 aa23.04■■□□□ 1.28
VSX1-205ENST00000429762 SLC7A14Q8TBB6 771 aa23.04■■□□□ 1.28
VSX1-205ENST00000429762 GPR152Q8TDT2 470 aa23.04■■□□□ 1.28
VSX1-205ENST00000429762 NPY6RQ99463 290 aa23.04■■□□□ 1.28
VSX1-205ENST00000429762 FUT8Q9BYC5 575 aa23.04■■□□□ 1.28
VSX1-205ENST00000429762 PTPRSQ13332 1948 aa23.04■■□□□ 1.28
VSX1-205ENST00000429762 NCAM1P13591 858 aa23.03■■□□□ 1.28
VSX1-205ENST00000429762 RPL17P18621 184 aaKnown RBP23.03■■□□□ 1.28
VSX1-205ENST00000429762 ECHS1P30084 290 aa23.03■■□□□ 1.28
VSX1-205ENST00000429762 PGFP49763 221 aa23.03■■□□□ 1.28
VSX1-205ENST00000429762 TRIP13Q15645 432 aaPredicted RBP23.03■■□□□ 1.28
VSX1-205ENST00000429762 TAZQ16635 292 aa23.03■■□□□ 1.28
VSX1-205ENST00000429762 MAP9Q49MG5 647 aa23.03■■□□□ 1.28
VSX1-205ENST00000429762 ERP44Q9BS26 406 aa23.03■■□□□ 1.28
VSX1-205ENST00000429762 TTPALQ9BTX7 342 aa23.03■■□□□ 1.28
VSX1-205ENST00000429762 PCDH18Q9HCL0 1135 aa23.03■■□□□ 1.28
VSX1-205ENST00000429762 DNPEPQ9ULA0 475 aa23.03■■□□□ 1.28
VSX1-205ENST00000429762 SLC27A5Q9Y2P5 690 aa23.03■■□□□ 1.28
VSX1-205ENST00000429762 MYO16Q9Y6X6 1858 aa23.03■■□□□ 1.28
VSX1-205ENST00000429762 ALPK3Q96L96 1907 aa23.03■■□□□ 1.28
VSX1-205ENST00000429762 ADAM12O43184 909 aa23.03■■□□□ 1.28
VSX1-205ENST00000429762 ECEL1O95672 775 aa23.03■■□□□ 1.28
VSX1-205ENST00000429762 KRT17Q04695 432 aa23.03■■□□□ 1.28
VSX1-205ENST00000429762 PPP6R3Q5H9R7 873 aaPredicted RBP23.03■■□□□ 1.28
VSX1-205ENST00000429762 DUPD1Q68J44 220 aa23.03■■□□□ 1.28
VSX1-205ENST00000429762 RNF19BQ6ZMZ0 732 aa23.03■■□□□ 1.28
VSX1-205ENST00000429762 ZNF689Q96CS4 500 aaPredicted RBP23.03■■□□□ 1.28
VSX1-205ENST00000429762 DHX35Q9H5Z1 703 aaKnown RBP23.03■■□□□ 1.28
VSX1-205ENST00000429762 C10orf88Q9H8K7 445 aa23.03■■□□□ 1.28
VSX1-205ENST00000429762 PCDHB5Q9Y5E4 795 aa23.03■■□□□ 1.28
VSX1-205ENST00000429762 OR6C75A6NL08 312 aa23.02■■□□□ 1.28
VSX1-205ENST00000429762 C2CD2LO14523 706 aa23.02■■□□□ 1.28
VSX1-205ENST00000429762 TNFRSF10BO14763 440 aa23.02■■□□□ 1.28
VSX1-205ENST00000429762 LIASO43766 372 aa23.02■■□□□ 1.28
VSX1-205ENST00000429762 ELAVL2Q12926 359 aaKnown RBP23.02■■□□□ 1.28
VSX1-205ENST00000429762 PPP1R7Q15435 360 aa23.02■■□□□ 1.28
VSX1-205ENST00000429762 CCNG2Q16589 344 aa23.02■■□□□ 1.28
VSX1-205ENST00000429762 BOLA3Q53S33 107 aa23.02■■□□□ 1.28
VSX1-205ENST00000429762 NPNTQ6UXI9 565 aa23.02■■□□□ 1.28
VSX1-205ENST00000429762 STRADAQ7RTN6 431 aa23.02■■□□□ 1.28
VSX1-205ENST00000429762 PYROXD2Q8N2H3 581 aa23.02■■□□□ 1.28
VSX1-205ENST00000429762 IGSF21Q96ID5 467 aa23.02■■□□□ 1.28
VSX1-205ENST00000429762 RAB17Q9H0T7 212 aa23.02■■□□□ 1.28
VSX1-205ENST00000429762 CRISPLD1Q9H336 500 aa23.02■■□□□ 1.28
VSX1-205ENST00000429762 PIGVQ9NUD9 493 aa23.02■■□□□ 1.28
VSX1-205ENST00000429762 RASAL2Q9UJF2 1139 aa23.02■■□□□ 1.28
VSX1-205ENST00000429762 STAP1Q9ULZ2 295 aa23.02■■□□□ 1.28
VSX1-205ENST00000429762 MRPL42Q9Y6G3 142 aaKnown RBP23.02■■□□□ 1.28
VSX1-205ENST00000429762 VNN2O95498 520 aa23.01■■□□□ 1.27
VSX1-205ENST00000429762 DEUP1Q05D60 604 aa23.01■■□□□ 1.27
VSX1-205ENST00000429762 NFE2Q16621 373 aaPredicted RBP23.01■■□□□ 1.27
VSX1-205ENST00000429762 ERMARDQ5T6L9 678 aa23.01■■□□□ 1.27
VSX1-205ENST00000429762 PM20D1Q6GTS8 502 aa23.01■■□□□ 1.27
VSX1-205ENST00000429762 KCNT2Q6UVM3 1135 aa23.01■■□□□ 1.27
VSX1-205ENST00000429762 TEKT4Q8WW24 435 aa23.01■■□□□ 1.27
VSX1-205ENST00000429762 RIN2Q8WYP3 895 aaPredicted RBP23.01■■□□□ 1.27
VSX1-205ENST00000429762 KCTD15Q96SI1 283 aaPredicted RBP23.01■■□□□ 1.27
VSX1-205ENST00000429762 AP4E1Q9UPM8 1137 aa23.01■■□□□ 1.27
VSX1-205ENST00000429762 USP3Q9Y6I4 520 aa23.01■■□□□ 1.27
VSX1-205ENST00000429762 ZBBXA8MT70 800 aa23.01■■□□□ 1.27
VSX1-205ENST00000429762 ENDOD1O94919 500 aa23.01■■□□□ 1.27
VSX1-205ENST00000429762 PECAM1P16284 738 aaPredicted RBP23.01■■□□□ 1.27
VSX1-205ENST00000429762 RPL21P46778 160 aaKnown RBP23.01■■□□□ 1.27
VSX1-205ENST00000429762 VPS41P49754 854 aa23.01■■□□□ 1.27
VSX1-205ENST00000429762 EPHB4P54760 987 aa23.01■■□□□ 1.27
VSX1-205ENST00000429762 BTG3Q14201 252 aaPredicted RBP23.01■■□□□ 1.27
VSX1-205ENST00000429762 CASP8Q14790 479 aa23.01■■□□□ 1.27
VSX1-205ENST00000429762 BSPRYQ5W0U4 402 aa23.01■■□□□ 1.27
VSX1-205ENST00000429762 BBS12Q6ZW61 710 aa23.01■■□□□ 1.27
VSX1-205ENST00000429762 B4GALNT4Q76KP1 1039 aa23.01■■□□□ 1.27
VSX1-205ENST00000429762 C16orf59Q7L2K0 433 aa23.01■■□□□ 1.27
VSX1-205ENST00000429762 NT5C3BQ969T7 300 aa23.01■■□□□ 1.27
VSX1-205ENST00000429762 RC3H2Q9HBD1 1191 aaKnown RBP23.01■■□□□ 1.27
VSX1-205ENST00000429762 CDY1Q9Y6F8 540 aa23.01■■□□□ 1.27
VSX1-205ENST00000429762 MTMR11A4FU01 709 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms