RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 CLIC5Q9NZA1 410 aa16.11■□□□□ 0.17
NUP50-204ENST00000417702 RAB23Q9ULC3 237 aa16.11■□□□□ 0.17
NUP50-204ENST00000417702 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.1■□□□□ 0.17
NUP50-204ENST00000417702 O00370 1275 aa16.1■□□□□ 0.17
NUP50-204ENST00000417702 SETSIPP0DME0 302 aa16.1■□□□□ 0.17
NUP50-204ENST00000417702 EIF2DP41214 584 aaKnown RBP16.1■□□□□ 0.17
NUP50-204ENST00000417702 TKTL1P51854 596 aa16.1■□□□□ 0.17
NUP50-204ENST00000417702 GAB4Q2WGN9 574 aa16.1■□□□□ 0.17
NUP50-204ENST00000417702 RAB41Q5JT25 222 aa16.1■□□□□ 0.17
NUP50-204ENST00000417702 PKN3Q6P5Z2 889 aa16.1■□□□□ 0.17
NUP50-204ENST00000417702 LCLAT1Q6UWP7 414 aa16.1■□□□□ 0.17
NUP50-204ENST00000417702 HTR3DQ70Z44 454 aa16.1■□□□□ 0.17
NUP50-204ENST00000417702 RSRC2Q7L4I2 434 aaKnown RBP16.1■□□□□ 0.17
NUP50-204ENST00000417702 ZNF276Q8N554 614 aa16.1■□□□□ 0.17
NUP50-204ENST00000417702 RPLP0P6Q8NHW5 317 aa16.1■□□□□ 0.17
NUP50-204ENST00000417702 UBA3Q8TBC4 463 aa16.1■□□□□ 0.17
NUP50-204ENST00000417702 RUBCNQ92622 972 aa16.1■□□□□ 0.17
NUP50-204ENST00000417702 KAT5Q92993 513 aa16.1■□□□□ 0.17
NUP50-204ENST00000417702 SECISBP2LQ93073 1101 aaKnown RBP16.1■□□□□ 0.17
NUP50-204ENST00000417702 ACDQ96AP0 544 aa16.1■□□□□ 0.17
NUP50-204ENST00000417702 PNKPQ96T60 521 aa16.1■□□□□ 0.17
NUP50-204ENST00000417702 C2orf42Q9NWW7 574 aa16.1■□□□□ 0.17
NUP50-204ENST00000417702 DACH1Q9UI36 760 aa16.1■□□□□ 0.17
NUP50-204ENST00000417702 NUDT5Q9UKK9 219 aa16.1■□□□□ 0.17
NUP50-204ENST00000417702 SMG5Q9UPR3 1016 aaKnown RBP16.1■□□□□ 0.17
NUP50-204ENST00000417702 MYO16Q9Y6X6 1858 aa16.1■□□□□ 0.17
NUP50-204ENST00000417702 MYOFQ9NZM1 2061 aa16.09■□□□□ 0.17
NUP50-204ENST00000417702 MDM4O15151 490 aa16.09■□□□□ 0.17
NUP50-204ENST00000417702 ZBED1O96006 694 aa16.09■□□□□ 0.17
NUP50-204ENST00000417702 APODP05090 189 aa16.09■□□□□ 0.17
NUP50-204ENST00000417702 CNR2P34972 360 aa16.09■□□□□ 0.17
NUP50-204ENST00000417702 YWHAGP61981 247 aaKnown RBP eCLIP16.09■□□□□ 0.17
NUP50-204ENST00000417702 STILQ15468 1287 aa16.09■□□□□ 0.17
NUP50-204ENST00000417702 CNGA2Q16280 664 aa16.09■□□□□ 0.17
NUP50-204ENST00000417702 ANO4Q32M45 955 aa16.09■□□□□ 0.17
NUP50-204ENST00000417702 PREPLQ4J6C6 727 aaPredicted RBP16.09■□□□□ 0.17
NUP50-204ENST00000417702 MIB1Q86YT6 1006 aa16.09■□□□□ 0.17
NUP50-204ENST00000417702 ARHGEF19Q8IW93 802 aa16.09■□□□□ 0.17
NUP50-204ENST00000417702 SIX6OS1Q8N1H7 587 aa16.09■□□□□ 0.17
NUP50-204ENST00000417702 RBBP8NLQ8NC74 664 aaPredicted RBP16.09■□□□□ 0.17
NUP50-204ENST00000417702 EZH1Q92800 747 aaPredicted RBP16.09■□□□□ 0.17
NUP50-204ENST00000417702 WBP2Q969T9 261 aa16.09■□□□□ 0.17
NUP50-204ENST00000417702 ULBP1Q9BZM6 244 aa16.09■□□□□ 0.17
NUP50-204ENST00000417702 SPHK2Q9NRA0 654 aa16.09■□□□□ 0.17
NUP50-204ENST00000417702 NCDNQ9UBB6 729 aa16.09■□□□□ 0.17
NUP50-204ENST00000417702 RASAL2Q9UJF2 1139 aa16.09■□□□□ 0.17
NUP50-204ENST00000417702 STRIP2Q9ULQ0 834 aa16.09■□□□□ 0.17
NUP50-204ENST00000417702 TULP2O00295 520 aa16.08■□□□□ 0.16
NUP50-204ENST00000417702 HOXC11O43248 304 aaPredicted RBP16.08■□□□□ 0.16
NUP50-204ENST00000417702 KRT5P13647 590 aa16.08■□□□□ 0.16
NUP50-204ENST00000417702 MTIF2P46199 727 aaKnown RBP16.08■□□□□ 0.16
NUP50-204ENST00000417702 SLC6A11P48066 632 aa16.08■□□□□ 0.16
NUP50-204ENST00000417702 SEC13P55735 322 aa16.08■□□□□ 0.16
NUP50-204ENST00000417702 COG7P83436 770 aa16.08■□□□□ 0.16
NUP50-204ENST00000417702 DMWDQ09019 674 aa16.08■□□□□ 0.16
NUP50-204ENST00000417702 ADIGQ0VDE8 80 aa16.08■□□□□ 0.16
NUP50-204ENST00000417702 EFEMP1Q12805 493 aa16.08■□□□□ 0.16
NUP50-204ENST00000417702 PM20D1Q6GTS8 502 aa16.08■□□□□ 0.16
NUP50-204ENST00000417702 PRR23BQ6ZRT6 265 aa16.08■□□□□ 0.16
NUP50-204ENST00000417702 SYT13Q7L8C5 426 aa16.08■□□□□ 0.16
NUP50-204ENST00000417702 FAM114A1Q8IWE2 563 aa16.08■□□□□ 0.16
NUP50-204ENST00000417702 CAMKK1Q8N5S9 505 aa16.08■□□□□ 0.16
NUP50-204ENST00000417702 KCTD13Q8WZ19 329 aa16.08■□□□□ 0.16
NUP50-204ENST00000417702 TFAP2BQ92481 460 aa16.08■□□□□ 0.16
NUP50-204ENST00000417702 FAM81BQ96LP2 452 aa16.08■□□□□ 0.16
NUP50-204ENST00000417702 CRACR2AQ9BSW2 395 aa16.08■□□□□ 0.16
NUP50-204ENST00000417702 UBE2TQ9NPD8 197 aaPredicted RBP16.08■□□□□ 0.16
NUP50-204ENST00000417702 ARHGEF4Q9NR80 690 aa16.08■□□□□ 0.16
NUP50-204ENST00000417702 ZNF510Q9Y2H8 683 aa16.08■□□□□ 0.16
NUP50-204ENST00000417702 VPS13AQ96RL7 3174 aa16.08■□□□□ 0.16
NUP50-204ENST00000417702 CCDC163A0A0D9SF12 145 aa16.07■□□□□ 0.16
NUP50-204ENST00000417702 K7EQS6 105 aa16.07■□□□□ 0.16
NUP50-204ENST00000417702 M0QYV0 167 aa16.07■□□□□ 0.16
NUP50-204ENST00000417702 RNF225M0QZC1 329 aaPredicted RBP16.07■□□□□ 0.16
NUP50-204ENST00000417702 GREM1O60565 184 aa16.07■□□□□ 0.16
NUP50-204ENST00000417702 KAT7O95251 611 aa16.07■□□□□ 0.16
NUP50-204ENST00000417702 BRD2P25440 801 aaKnown RBP16.07■□□□□ 0.16
NUP50-204ENST00000417702 ERCC5P28715 1186 aaPredicted RBP16.07■□□□□ 0.16
NUP50-204ENST00000417702 GRIA2P42262 883 aa16.07■□□□□ 0.16
NUP50-204ENST00000417702 SIM2Q14190 667 aaPredicted RBP16.07■□□□□ 0.16
NUP50-204ENST00000417702 DMC1Q14565 340 aa16.07■□□□□ 0.16
NUP50-204ENST00000417702 DPCR1Q3MIW9 517 aa16.07■□□□□ 0.16
NUP50-204ENST00000417702 PKDCCQ504Y2 493 aa16.07■□□□□ 0.16
NUP50-204ENST00000417702 C2orf27AQ580R0 203 aa16.07■□□□□ 0.16
NUP50-204ENST00000417702 GBP6Q6ZN66 633 aa16.07■□□□□ 0.16
NUP50-204ENST00000417702 NUDT18Q6ZVK8 323 aa16.07■□□□□ 0.16
NUP50-204ENST00000417702 ENOSF1Q7L5Y1 443 aa16.07■□□□□ 0.16
NUP50-204ENST00000417702 WDR5BQ86VZ2 330 aa16.07■□□□□ 0.16
NUP50-204ENST00000417702 C12orf40Q86WS4 652 aa16.07■□□□□ 0.16
NUP50-204ENST00000417702 TMEM25Q86YD3 366 aa16.07■□□□□ 0.16
NUP50-204ENST00000417702 USP33Q8TEY7 942 aa16.07■□□□□ 0.16
NUP50-204ENST00000417702 KREMEN1Q96MU8 473 aa16.07■□□□□ 0.16
NUP50-204ENST00000417702 MED15Q96RN5 788 aa16.07■□□□□ 0.16
NUP50-204ENST00000417702 DCLK3Q9C098 648 aa16.07■□□□□ 0.16
NUP50-204ENST00000417702 THAP9Q9H5L6 903 aa16.07■□□□□ 0.16
NUP50-204ENST00000417702 CNGB3Q9NQW8 809 aa16.07■□□□□ 0.16
NUP50-204ENST00000417702 LMBRD1Q9NUN5 540 aa16.07■□□□□ 0.16
NUP50-204ENST00000417702 MARCH2Q9P0N8 246 aa16.07■□□□□ 0.16
NUP50-204ENST00000417702 WDR35Q9P2L0 1181 aa16.07■□□□□ 0.16
NUP50-204ENST00000417702 DEC1Q9P2X7 70 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms