RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 NHEJ1Q9H9Q4 299 aaPredicted RBP32.06■■■□□ 2.72
CSNK1E-206ENST00000413574 CLIC5Q9NZA1 410 aa32.06■■■□□ 2.72
CSNK1E-206ENST00000413574 TRAV19A0A0A6YYK7 116 aa32.05■■■□□ 2.72
CSNK1E-206ENST00000413574 LOC730098B7Z3J9 87 aa32.05■■■□□ 2.72
CSNK1E-206ENST00000413574 GOLGA8SH3BPF8 625 aa32.05■■■□□ 2.72
CSNK1E-206ENST00000413574 MDM4O15151 490 aa32.05■■■□□ 2.72
CSNK1E-206ENST00000413574 PRAMEF12O95522 483 aa32.05■■■□□ 2.72
CSNK1E-206ENST00000413574 FYNP06241 537 aa32.05■■■□□ 2.72
CSNK1E-206ENST00000413574 SLC6A3Q01959 620 aa32.05■■■□□ 2.72
CSNK1E-206ENST00000413574 GFPT1Q06210 699 aaPredicted RBP32.05■■■□□ 2.72
CSNK1E-206ENST00000413574 MAPK8IP2Q13387 824 aaPredicted RBP32.05■■■□□ 2.72
CSNK1E-206ENST00000413574 ASTE1Q2TB18 679 aaPredicted RBP32.05■■■□□ 2.72
CSNK1E-206ENST00000413574 PANX2Q96RD6 677 aa32.05■■■□□ 2.72
CSNK1E-206ENST00000413574 PRKAG3Q9UGI9 489 aa32.05■■■□□ 2.72
CSNK1E-206ENST00000413574 LIMD1Q9UGP4 676 aa32.05■■■□□ 2.72
CSNK1E-206ENST00000413574 CCL26Q9Y258 94 aa32.05■■■□□ 2.72
CSNK1E-206ENST00000413574 ZFP37Q9Y6Q3 630 aaPredicted RBP32.05■■■□□ 2.72
CSNK1E-206ENST00000413574 AVPR1AP37288 418 aa32.04■■■□□ 2.72
CSNK1E-206ENST00000413574 VIPR2P41587 438 aa32.04■■■□□ 2.72
CSNK1E-206ENST00000413574 PARM1Q6UWI2 310 aa32.04■■■□□ 2.72
CSNK1E-206ENST00000413574 FGF14Q92915 247 aa32.04■■■□□ 2.72
CSNK1E-206ENST00000413574 SMARCD2Q92925 531 aa32.04■■■□□ 2.72
CSNK1E-206ENST00000413574 KHSRPQ92945 711 aaKnown RBP eCLIP32.04■■■□□ 2.72
CSNK1E-206ENST00000413574 DEF6Q9H4E7 631 aa32.04■■■□□ 2.72
CSNK1E-206ENST00000413574 MYO10Q9HD67 2058 aa32.04■■■□□ 2.72
CSNK1E-206ENST00000413574 SSU72P8A0A1W2PR75 194 aa32.04■■■□□ 2.72
CSNK1E-206ENST00000413574 SART1O43290 800 aaKnown RBP32.04■■■□□ 2.72
CSNK1E-206ENST00000413574 OLFM2O95897 454 aa32.04■■■□□ 2.72
CSNK1E-206ENST00000413574 FTLP02792 175 aaPredicted RBP32.04■■■□□ 2.72
CSNK1E-206ENST00000413574 RALAP11233 206 aa32.04■■■□□ 2.72
CSNK1E-206ENST00000413574 GZMAP12544 262 aa32.04■■■□□ 2.72
CSNK1E-206ENST00000413574 FCARP24071 287 aa32.04■■■□□ 2.72
CSNK1E-206ENST00000413574 TUBP50607 506 aa32.04■■■□□ 2.72
CSNK1E-206ENST00000413574 CDK17Q00537 523 aa32.04■■■□□ 2.72
CSNK1E-206ENST00000413574 C10orf120Q5SQS8 335 aa32.04■■■□□ 2.72
CSNK1E-206ENST00000413574 MCOLN2Q8IZK6 566 aa32.04■■■□□ 2.72
CSNK1E-206ENST00000413574 ABCC13Q9NSE7 274 aa32.04■■■□□ 2.72
CSNK1E-206ENST00000413574 ZXDBP98169 803 aa32.03■■■□□ 2.72
CSNK1E-206ENST00000413574 FAM102AQ5T9C2 384 aaPredicted RBP32.03■■■□□ 2.72
CSNK1E-206ENST00000413574 TANGO2Q6ICL3 276 aa32.03■■■□□ 2.72
CSNK1E-206ENST00000413574 ZDHHC17Q8IUH5 632 aa32.03■■■□□ 2.72
CSNK1E-206ENST00000413574 RSAD2Q8WXG1 361 aa32.03■■■□□ 2.72
CSNK1E-206ENST00000413574 GOLGA1Q92805 767 aa32.03■■■□□ 2.72
CSNK1E-206ENST00000413574 USP13Q92995 863 aaPredicted RBP32.03■■■□□ 2.72
CSNK1E-206ENST00000413574 RSPRY1Q96DX4 576 aa32.03■■■□□ 2.72
CSNK1E-206ENST00000413574 NACA2Q9H009 215 aa32.03■■■□□ 2.72
CSNK1E-206ENST00000413574 SMPD4Q9NXE4 827 aa32.03■■■□□ 2.72
CSNK1E-206ENST00000413574 NAALADL1Q9UQQ1 740 aa32.03■■■□□ 2.72
CSNK1E-206ENST00000413574 SOBPA7XYQ1 873 aa32.02■■■□□ 2.72
CSNK1E-206ENST00000413574 RTN2O75298 545 aa32.02■■■□□ 2.72
CSNK1E-206ENST00000413574 GJB6O95452 261 aa32.02■■■□□ 2.72
CSNK1E-206ENST00000413574 YWHAZP63104 245 aaKnown RBP32.02■■■□□ 2.72
CSNK1E-206ENST00000413574 C1QBPQ07021 282 aaKnown RBP32.02■■■□□ 2.72
CSNK1E-206ENST00000413574 TOGARAM2Q6ZUX3 1019 aa32.02■■■□□ 2.72
CSNK1E-206ENST00000413574 RSRC2Q7L4I2 434 aaKnown RBP32.02■■■□□ 2.72
CSNK1E-206ENST00000413574 ZDHHC14Q8IZN3 488 aa32.02■■■□□ 2.72
CSNK1E-206ENST00000413574 TTC16Q8NEE8 873 aa32.02■■■□□ 2.72
CSNK1E-206ENST00000413574 CCDC42Q96M95 316 aa32.02■■■□□ 2.72
CSNK1E-206ENST00000413574 NECAB3Q96P71 396 aaPredicted RBP32.02■■■□□ 2.72
CSNK1E-206ENST00000413574 KXD1Q9BQD3 176 aa32.02■■■□□ 2.72
CSNK1E-206ENST00000413574 RPP25Q9BUL9 199 aaKnown RBP32.02■■■□□ 2.72
CSNK1E-206ENST00000413574 SPTLC3Q9NUV7 552 aa32.02■■■□□ 2.72
CSNK1E-206ENST00000413574 ZMYM5Q9UJ78 669 aa32.02■■■□□ 2.72
CSNK1E-206ENST00000413574 AKR1B10O60218 316 aa32.01■■■□□ 2.72
CSNK1E-206ENST00000413574 MBL2P11226 248 aaPredicted RBP32.01■■■□□ 2.72
CSNK1E-206ENST00000413574 ATP5C1P36542 298 aaKnown RBP32.01■■■□□ 2.72
CSNK1E-206ENST00000413574 RNASE9P60153 205 aaKnown RBP32.01■■■□□ 2.72
CSNK1E-206ENST00000413574 EFEMP1Q12805 493 aa32.01■■■□□ 2.72
CSNK1E-206ENST00000413574 ZNF268Q14587 947 aaPredicted RBP32.01■■■□□ 2.72
CSNK1E-206ENST00000413574 EFHC1Q5JVL4 640 aa32.01■■■□□ 2.72
CSNK1E-206ENST00000413574 CCDC122Q5T0U0 273 aa32.01■■■□□ 2.72
CSNK1E-206ENST00000413574 SYPL2Q5VXT5 272 aa32.01■■■□□ 2.72
CSNK1E-206ENST00000413574 ALKBH5Q6P6C2 394 aaKnown RBP32.01■■■□□ 2.72
CSNK1E-206ENST00000413574 PLCD3Q8N3E9 789 aa32.01■■■□□ 2.72
CSNK1E-206ENST00000413574 ISCUQ9H1K1 167 aa32.01■■■□□ 2.72
CSNK1E-206ENST00000413574 TDP1Q9NUW8 608 aa32.01■■■□□ 2.72
CSNK1E-206ENST00000413574 NENFQ9UMX5 172 aa32.01■■■□□ 2.72
CSNK1E-206ENST00000413574 CALB1P05937 261 aa32■■■□□ 2.71
CSNK1E-206ENST00000413574 NCAM1P13591 858 aa32■■■□□ 2.71
CSNK1E-206ENST00000413574 SLC18A3Q16572 532 aa32■■■□□ 2.71
CSNK1E-206ENST00000413574 TJAP1Q5JTD0 557 aa32■■■□□ 2.71
CSNK1E-206ENST00000413574 SLC26A9Q7LBE3 791 aa32■■■□□ 2.71
CSNK1E-206ENST00000413574 LRRC3BQ96PB8 259 aa32■■■□□ 2.71
CSNK1E-206ENST00000413574 PLA2G2FQ9BZM2 168 aa32■■■□□ 2.71
CSNK1E-206ENST00000413574 POPDC2Q9HBU9 364 aa32■■■□□ 2.71
CSNK1E-206ENST00000413574 CPQQ9Y646 472 aa32■■■□□ 2.71
CSNK1E-206ENST00000413574 NUMBLQ9Y6R0 609 aa32■■■□□ 2.71
CSNK1E-206ENST00000413574 GOLGA6L6A8MZA4 724 aa32■■■□□ 2.71
CSNK1E-206ENST00000413574 ATMINO43313 823 aaPredicted RBP32■■■□□ 2.71
CSNK1E-206ENST00000413574 ASGR2P07307 311 aa32■■■□□ 2.71
CSNK1E-206ENST00000413574 PFKLP17858 780 aa32■■■□□ 2.71
CSNK1E-206ENST00000413574 RRM1P23921 792 aa32■■■□□ 2.71
CSNK1E-206ENST00000413574 HTR4Q13639 388 aa32■■■□□ 2.71
CSNK1E-206ENST00000413574 MIB1Q86YT6 1006 aa32■■■□□ 2.71
CSNK1E-206ENST00000413574 ZNF276Q8N554 614 aa32■■■□□ 2.71
CSNK1E-206ENST00000413574 RIN3Q8TB24 985 aa32■■■□□ 2.71
CSNK1E-206ENST00000413574 RNF139Q8WU17 664 aa32■■■□□ 2.71
CSNK1E-206ENST00000413574 TRPV4Q9HBA0 871 aa32■■■□□ 2.71
CSNK1E-206ENST00000413574 ZFP14Q9HCL3 533 aa32■■■□□ 2.71
CSNK1E-206ENST00000413574 GKN1Q9NS71 199 aa32■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms