RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 KATNAL2Q8IYT4 538 aa13.25□□□□□ -0.29
HERC3-203ENST00000407637 HELQQ8TDG4 1101 aa13.25□□□□□ -0.29
HERC3-203ENST00000407637 SGF29Q96ES7 293 aa13.25□□□□□ -0.29
HERC3-203ENST00000407637 ZNF778Q96MU6 729 aa13.25□□□□□ -0.29
HERC3-203ENST00000407637 KCNK16Q96T55 309 aa13.25□□□□□ -0.29
HERC3-203ENST00000407637 PCIF1Q9H4Z3 704 aa13.25□□□□□ -0.29
HERC3-203ENST00000407637 XAB2Q9HCS7 855 aaKnown RBP13.25□□□□□ -0.29
HERC3-203ENST00000407637 ZBTB1Q9Y2K1 713 aa13.25□□□□□ -0.29
HERC3-203ENST00000407637 PLLPQ9Y342 182 aa13.25□□□□□ -0.29
HERC3-203ENST00000407637 FARP1Q9Y4F1 1045 aaPredicted RBP13.25□□□□□ -0.29
HERC3-203ENST00000407637 NUB1Q9Y5A7 615 aa13.25□□□□□ -0.29
HERC3-203ENST00000407637 NHSQ6T4R5 1651 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 A0A1W2PPW3 197 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 KRBA1A5PL33 1030 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 H0YIN7 160 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 H3BNH8 94 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 PSTPIP1O43586 416 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 PROSCO94903 275 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 INHBBP09529 407 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 EIF2AK2P19525 551 aaKnown RBP13.24□□□□□ -0.29
HERC3-203ENST00000407637 L1CAMP32004 1257 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 MSX2P35548 267 aaPredicted RBP13.24□□□□□ -0.29
HERC3-203ENST00000407637 KCNJ8Q15842 424 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 PHKG1Q16816 387 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 RGS21Q2M5E4 152 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 LMBRD2Q68DH5 695 aaPredicted RBP13.24□□□□□ -0.29
HERC3-203ENST00000407637 POTEAQ6S8J7 498 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.24□□□□□ -0.29
HERC3-203ENST00000407637 TRPC4APQ8TEL6 797 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 TAMM41Q96BW9 452 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 TRIM11Q96F44 468 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 ANKRD36BP1Q96IX9 119 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 C10orf88Q9H8K7 445 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 MYRFQ9Y2G1 1151 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 CORINQ9Y5Q5 1042 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 TCRBV7S3A2A0A539 114 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 ARHGEF37A1IGU5 675 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 IPO5O00410 1097 aaKnown RBP13.24□□□□□ -0.29
HERC3-203ENST00000407637 GAP43P17677 238 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 GSSP48637 474 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 CETN1Q12798 172 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 PTP4A2Q12974 167 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 NFX1Q12986 1120 aaKnown RBP13.24□□□□□ -0.29
HERC3-203ENST00000407637 PARP10Q53GL7 1025 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 PPP6R3Q5H9R7 873 aaPredicted RBP13.24□□□□□ -0.29
HERC3-203ENST00000407637 RINT1Q6NUQ1 792 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 IGDCC3Q8IVU1 814 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 SLC44A1Q8WWI5 657 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 CPT1BQ92523 772 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 DHX38Q92620 1227 aaKnown RBP13.24□□□□□ -0.29
HERC3-203ENST00000407637 RMND5BQ96G75 393 aaPredicted RBP13.24□□□□□ -0.29
HERC3-203ENST00000407637 INO80BQ9C086 356 aaPredicted RBP13.24□□□□□ -0.29
HERC3-203ENST00000407637 NRDE2Q9H7Z3 1164 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 VPS45Q9NRW7 570 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 GID8Q9NWU2 228 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 CDH7Q9ULB5 785 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 APOBEC2Q9Y235 224 aaKnown RBP13.24□□□□□ -0.29
HERC3-203ENST00000407637 DNAJC16Q9Y2G8 782 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 SCINQ9Y6U3 715 aa13.24□□□□□ -0.29
HERC3-203ENST00000407637 TISP43B9A030 160 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 USP17L15C9J2P7 530 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 USP17L13C9JLJ4 530 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 USP17L11C9JVI0 530 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 USP17L18D6R9N7 530 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 USP17L22D6RA61 530 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 USP17L17D6RBQ6 530 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 USP17L19D6RCP7 530 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 USP17L20D6RJB6 530 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 PCYT1AP49585 367 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 USP17L24Q0WX57 530 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 BNIP3Q12983 259 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 PPP2R5DQ14738 602 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 FAM182AQ5T1J6 154 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 USP17L6PQ6QN14 398 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 IQCF2Q8IXL9 164 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 ZNF34Q8IZ26 560 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 PHTF2Q8N3S3 785 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 EXD1Q8NHP7 514 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 CPA5Q8WXQ8 436 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 VTI1AQ96AJ9 217 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 HIPK3Q9H422 1215 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 PCDH9Q9HC56 1237 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 GPRC5DQ9NZD1 345 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 GNPTGQ9UJJ9 305 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 TCRBV9S1A1TA0A576 114 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 C7orf72A4D263 438 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 SLC26A4O43511 780 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 GRIN3BO60391 1043 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 NCF2P19878 526 aaPredicted RBP13.23□□□□□ -0.29
HERC3-203ENST00000407637 GABRB3P28472 473 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 STX3Q13277 289 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 FLOT2Q14254 428 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 SF3B4Q15427 424 aaKnown RBP eCLIP13.23□□□□□ -0.292e-6■■■■■ 33.9
HERC3-203ENST00000407637 PRR16Q569H4 304 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 PDPK2PQ6A1A2 396 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 KRT80Q6KB66 452 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 SETD3Q86TU7 594 aaPredicted RBP13.23□□□□□ -0.29
HERC3-203ENST00000407637 MCOLN2Q8IZK6 566 aa13.23□□□□□ -0.29
HERC3-203ENST00000407637 LRRC47Q8N1G4 583 aaKnown RBP13.23□□□□□ -0.29
HERC3-203ENST00000407637 DDX1Q92499 740 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms