RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 SERPINB11Q96P15 392 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 CACYBPQ9HB71 228 aaKnown RBP13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 RRN3Q9NYV6 651 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 CDH9Q9ULB4 789 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 ZMYM2Q9UBW7 1377 aa13.57□□□□□ -0.24
PTPRN2-202ENST00000389416 PRR23AA6NEV1 266 aa13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 NVLO15381 856 aaKnown RBP13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 SELPP16109 830 aa13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 TGM2P21980 687 aa13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 HSD17B3P37058 310 aa13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 FDFT1P37268 417 aa13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 MBTD1Q05BQ5 628 aa13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 MAP7Q14244 749 aa13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 POLD3Q15054 466 aaPredicted RBP13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 LLGL2Q6P1M3 1020 aa13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 FAM183BPQ6ZVS7 135 aa13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 SLC24A5Q71RS6 500 aa13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 HSFY1Q96LI6 401 aa13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 MRPL17Q9NRX2 175 aaKnown RBP13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 MARCH2Q9P0N8 246 aa13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 SAE1Q9UBE0 346 aaPredicted RBP13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 APOBEC2Q9Y235 224 aaKnown RBP13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 SIGLEC16A6NMB1 481 aa13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 SPRP35270 261 aaPredicted RBP13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 KIF19Q2TAC6 998 aa13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 UNC45BQ8IWX7 931 aa13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 ELMO2Q96JJ3 720 aa13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 TRIM54Q9BYV2 358 aa13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 IGFLR1Q9H665 355 aa13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 C10orf88Q9H8K7 445 aa13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 VANGL2Q9ULK5 521 aa13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 TRUB2O95900 331 aaKnown RBP13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 VCPP55072 806 aaKnown RBP13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 PDAP1Q13442 181 aaKnown RBP13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 ZRANB3Q5FWF4 1079 aa13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 PDCD7Q8N8D1 485 aaKnown RBP13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 MYLPFQ96A32 169 aa13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 PBXIP1Q96AQ6 731 aa13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 SRRDQ9UH36 339 aa13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 PCDHGC5Q9Y5F6 944 aa13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 NHSL1Q5SYE7 1610 aa13.56□□□□□ -0.24
PTPRN2-202ENST00000389416 RPTORQ8N122 1335 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 OR1E1P30953 314 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 NOS2P35228 1153 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 HSPA9P38646 679 aaKnown RBP13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 SCNN1BP51168 640 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 GEMP55040 296 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 DBN1Q16643 649 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 DCLRE1AQ6PJP8 1040 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 NECAB2Q7Z6G3 386 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 FBXO36Q8NEA4 188 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 HDAC7Q8WUI4 952 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 WNT8BQ93098 351 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 NTPCRQ9BSD7 190 aaKnown RBP13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 TCHHQ07283 1943 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 SPAG6O75602 509 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 RTN3O95197 1032 aaPredicted RBP13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 PBX1P40424 430 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 ART3Q13508 389 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 OTOP2Q7RTS6 562 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 LINC00523Q86TU6 105 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 LRRC6Q86X45 466 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 GPR152Q8TDT2 470 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 PABPC3Q9H361 631 aaKnown RBP13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 VIPAS39Q9H9C1 493 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 CPSF2Q9P2I0 782 aaKnown RBP13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 SLC39A10Q9ULF5 831 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 NUP188Q5SRE5 1749 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 PKD1L3Q7Z443 1732 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 UNCXA6NJT0 531 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 ADCY6O43306 1168 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 RAMP2O60895 175 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 C4BPAP04003 597 aaKnown RBP13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 SNRPAP09012 282 aaKnown RBP13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 ADSSP30520 456 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 ZC3H12AQ5D1E8 599 aaKnown RBP13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 LRRC8DQ7L1W4 858 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 LRRN4CLQ8ND94 238 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 SH3KBP1Q96B97 665 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 RMDN2Q96LZ7 410 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 EMILIN2Q9BXX0 1053 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 PIH1D1Q9NWS0 290 aaKnown RBP13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 DNPEPQ9ULA0 475 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 HNRNPH3P31942 346 aaKnown RBP13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 TERF2Q15554 542 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 DDR2Q16832 855 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 MAP3K21Q5TCX8 1036 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 OLFML2BQ68BL8 750 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 FIBCD1Q8N539 461 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 COLGALT1Q8NBJ5 622 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 DBF4BQ8NFT6 615 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 UROC1Q96N76 676 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 PPP1R2P1Q96PQ5 205 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 FRMD8Q9BZ67 464 aaPredicted RBP13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 FRMD8P1Q9BZ68 369 aaPredicted RBP13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 DCLK3Q9C098 648 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 CHST7Q9NS84 486 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 BAG5Q9UL15 447 aa13.55□□□□□ -0.24
PTPRN2-202ENST00000389416 MARCKSL1P49006 195 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms