RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 PSMA4P25789 261 aaKnown RBP8.66□□□□□ -1.02
VPS36-201ENST00000378060 RGS4P49798 205 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 PRKAA2P54646 552 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 GEMP55040 296 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 ZNF268Q14587 947 aaPredicted RBP8.66□□□□□ -1.02
VPS36-201ENST00000378060 KCNT1Q5JUK3 1230 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 IZUMO2Q6UXV1 221 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 OTOP1Q7RTM1 612 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 SPATA2LQ8IUW3 424 aaPredicted RBP8.66□□□□□ -1.02
VPS36-201ENST00000378060 TMEM139Q8IV31 216 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 ETNPPLQ8TBG4 499 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 ACER1Q8TDN7 264 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 TCP10LQ8TDR4 215 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 ZNF606Q8WXB4 792 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 LRRC39Q96DD0 335 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 APOPT1Q96IL0 206 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 INPP4AQ96PE3 977 aaPredicted RBP8.66□□□□□ -1.02
VPS36-201ENST00000378060 UBE2OQ9C0C9 1292 aaKnown RBP8.66□□□□□ -1.02
VPS36-201ENST00000378060 C10orf88Q9H8K7 445 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 CASS4Q9NQ75 786 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 THAP1Q9NVV9 213 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 SCN3BQ9NY72 215 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 LMCD1Q9NZU5 365 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 RPL26L1Q9UNX3 145 aaKnown RBP8.66□□□□□ -1.02
VPS36-201ENST00000378060 STARD13Q9Y3M8 1113 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 HIST1H2AGP0C0S8 130 aaPredicted RBP8.66□□□□□ -1.02
VPS36-201ENST00000378060 FAM200BP0CF97 657 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 RARBP10826 455 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 PECAM1P16284 738 aaPredicted RBP8.66□□□□□ -1.02
VPS36-201ENST00000378060 HIST1H2ADP20671 130 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 BGNP21810 368 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 EPHB2P29323 1055 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 S100A5P33763 92 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 NNMTP40261 264 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 TAF6P49848 677 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 ALDH5A1P51649 535 aaPredicted RBP8.66□□□□□ -1.02
VPS36-201ENST00000378060 PSMD7P51665 324 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 CACNA2D1P54289 1103 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 SLC12A3P55017 1021 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 ILF2Q12905 390 aaKnown RBP8.66□□□□□ -1.02
VPS36-201ENST00000378060 DCAF4L1Q3SXM0 396 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 C2CD6Q53TS8 623 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 TERB1Q8NA31 727 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 IPMKQ8NFU5 416 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 USP33Q8TEY7 942 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 GTF3C2Q8WUA4 911 aaPredicted RBP8.66□□□□□ -1.02
VPS36-201ENST00000378060 ZNF75CPQ92670 426 aaPredicted RBP8.66□□□□□ -1.02
VPS36-201ENST00000378060 ZBED3Q96IU2 234 aaPredicted RBP8.66□□□□□ -1.02
VPS36-201ENST00000378060 WNK4Q96J92 1243 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 HIST1H2AHQ96KK5 128 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 HIST1H2AJQ99878 128 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 H2AFJQ9BTM1 129 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 MTMR12Q9C0I1 747 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 COG4Q9H9E3 785 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 ABCF3Q9NUQ8 709 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 NCKIPSDQ9NZQ3 722 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 ATP9AO75110 1047 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 DGKIO75912 1065 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 CYP3A4P08684 503 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 PTPN11Q06124 597 aaPredicted RBP8.66□□□□□ -1.02
VPS36-201ENST00000378060 PLD3Q8IV08 490 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 UNC45BQ8IWX7 931 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 KATNAL2Q8IYT4 538 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 LRRC71Q8N4P6 559 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 PABPC5Q96DU9 382 aaKnown RBP8.66□□□□□ -1.02
VPS36-201ENST00000378060 RNPEPL1Q9HAU8 725 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 SORCS3Q9UPU3 1222 aa8.66□□□□□ -1.02
VPS36-201ENST00000378060 MAGEB16A2A368 324 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 XPO1O14980 1071 aaKnown RBP8.65□□□□□ -1.02
VPS36-201ENST00000378060 NCAM2O15394 837 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 SOAT2O75908 522 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 SERPINE1P05121 402 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 RPS12P25398 132 aaKnown RBP8.65□□□□□ -1.02
VPS36-201ENST00000378060 EPHX2P34913 555 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 SLC26A2P50443 739 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 PEX5P50542 639 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 DAB2P98082 770 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 LAMC2Q13753 1193 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 RRP1BQ14684 758 aaKnown RBP8.65□□□□□ -1.02
VPS36-201ENST00000378060 CNGA2Q16280 664 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 OLFML2BQ68BL8 750 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 NOTUMQ6P988 496 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 EP400NLQ6ZTU2 488 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 KCNK18Q7Z418 384 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 OR6J1Q8NGC5 347 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 POP1Q99575 1024 aaKnown RBP8.65□□□□□ -1.02
VPS36-201ENST00000378060 PDCD2LQ9BRP1 358 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 FAM192AQ9GZU8 254 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 GANQ9H2C0 597 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 APPL1Q9UKG1 709 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 SYNPO2Q9UMS6 1093 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 ACOT9Q9Y305 439 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 ATXN2Q99700 1313 aaKnown RBP8.65□□□□□ -1.02
VPS36-201ENST00000378060 RCCD1A6NED2 376 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 TRDMT1O14717 391 aaKnown RBP8.65□□□□□ -1.02
VPS36-201ENST00000378060 ELK3P41970 407 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 DEFA1P59665 94 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 DEFA3P59666 94 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 PLOD1Q02809 727 aaPredicted RBP8.65□□□□□ -1.02
VPS36-201ENST00000378060 AUHQ13825 339 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms