RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 BAHCC1Q9P281 2608 aa14.59□□□□□ -0.07
CXCL12-202ENST00000374426 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.59□□□□□ -0.07
CXCL12-202ENST00000374426 PVALEFA0A1B0GWK0 134 aa14.59□□□□□ -0.07
CXCL12-202ENST00000374426 A0A1W2PQF6 199 aa14.59□□□□□ -0.07
CXCL12-202ENST00000374426 TLR5O60602 858 aa14.59□□□□□ -0.07
CXCL12-202ENST00000374426 TBX18O95935 607 aa14.59□□□□□ -0.07
CXCL12-202ENST00000374426 CFIP05156 583 aa14.59□□□□□ -0.07
CXCL12-202ENST00000374426 CCDC130P13994 396 aa14.59□□□□□ -0.07
CXCL12-202ENST00000374426 HOXB2P14652 356 aa14.59□□□□□ -0.07
CXCL12-202ENST00000374426 HOXD12P35452 270 aa14.59□□□□□ -0.07
CXCL12-202ENST00000374426 DPP6P42658 865 aa14.59□□□□□ -0.07
CXCL12-202ENST00000374426 WASP42768 502 aa14.59□□□□□ -0.07
CXCL12-202ENST00000374426 AP3M2P53677 418 aa14.59□□□□□ -0.07
CXCL12-202ENST00000374426 ORC1Q13415 861 aa14.59□□□□□ -0.07
CXCL12-202ENST00000374426 CUL4BQ13620 913 aa14.59□□□□□ -0.07
CXCL12-202ENST00000374426 PREPLQ4J6C6 727 aaPredicted RBP14.59□□□□□ -0.07
CXCL12-202ENST00000374426 EGFLAMQ63HQ2 1017 aa14.59□□□□□ -0.07
CXCL12-202ENST00000374426 HTR3DQ70Z44 454 aa14.59□□□□□ -0.07
CXCL12-202ENST00000374426 PIP4P1Q86T03 277 aa14.59□□□□□ -0.07
CXCL12-202ENST00000374426 SLC2A14Q8TDB8 520 aa14.59□□□□□ -0.07
CXCL12-202ENST00000374426 GATA6Q92908 595 aa14.59□□□□□ -0.07
CXCL12-202ENST00000374426 NACA2Q9H009 215 aa14.59□□□□□ -0.07
CXCL12-202ENST00000374426 CSNK1G1Q9HCP0 422 aa14.59□□□□□ -0.07
CXCL12-202ENST00000374426 CALCOCO1Q9P1Z2 691 aa14.59□□□□□ -0.07
CXCL12-202ENST00000374426 STARD13Q9Y3M8 1113 aa14.59□□□□□ -0.07
CXCL12-202ENST00000374426 K7ELQ4 463 aaPredicted RBP14.58□□□□□ -0.08
CXCL12-202ENST00000374426 AP5Z1O43299 807 aa14.58□□□□□ -0.08
CXCL12-202ENST00000374426 CLSTN1O94985 981 aa14.58□□□□□ -0.08
CXCL12-202ENST00000374426 NTSR1P30989 418 aa14.58□□□□□ -0.08
CXCL12-202ENST00000374426 AFMP43652 599 aa14.58□□□□□ -0.08
CXCL12-202ENST00000374426 NDST1P52848 882 aa14.58□□□□□ -0.08
CXCL12-202ENST00000374426 MAP3K7CLP57077 242 aa14.58□□□□□ -0.08
CXCL12-202ENST00000374426 DLG4P78352 724 aa14.58□□□□□ -0.08
CXCL12-202ENST00000374426 RPL6Q02878 288 aaKnown RBP14.58□□□□□ -0.08
CXCL12-202ENST00000374426 SEMA3BQ13214 749 aa14.58□□□□□ -0.08
CXCL12-202ENST00000374426 GRAMD4Q6IC98 578 aa14.58□□□□□ -0.08
CXCL12-202ENST00000374426 NUDT18Q6ZVK8 323 aa14.58□□□□□ -0.08
CXCL12-202ENST00000374426 GRAMD1CQ8IYS0 662 aa14.58□□□□□ -0.08
CXCL12-202ENST00000374426 CRYBG2Q8N1P7 616 aa14.58□□□□□ -0.08
CXCL12-202ENST00000374426 DEFB119Q8N690 84 aa14.58□□□□□ -0.08
CXCL12-202ENST00000374426 GOLGA5Q8TBA6 731 aa14.58□□□□□ -0.08
CXCL12-202ENST00000374426 ACOX2Q99424 681 aa14.58□□□□□ -0.08
CXCL12-202ENST00000374426 KLF16Q9BXK1 252 aaPredicted RBP14.58□□□□□ -0.08
CXCL12-202ENST00000374426 SLC32A1Q9H598 525 aa14.58□□□□□ -0.08
CXCL12-202ENST00000374426 CAPN10Q9HC96 672 aa14.58□□□□□ -0.08
CXCL12-202ENST00000374426 DNAJC17Q9NVM6 304 aaKnown RBP14.58□□□□□ -0.08
CXCL12-202ENST00000374426 DMAC2Q9NW81 257 aa14.58□□□□□ -0.08
CXCL12-202ENST00000374426 NBEAQ8NFP9 2946 aa14.58□□□□□ -0.08
CXCL12-202ENST00000374426 ITPR1Q14643 2758 aa14.57□□□□□ -0.08
CXCL12-202ENST00000374426 IGHV1OR15-9A0A0B4J2B8 117 aa14.57□□□□□ -0.08
CXCL12-202ENST00000374426 UPK3BL1B0FP48 263 aa14.57□□□□□ -0.08
CXCL12-202ENST00000374426 PRRT4C9JH25 899 aa14.57□□□□□ -0.08
CXCL12-202ENST00000374426 UPK3BL2E5RIL1 263 aa14.57□□□□□ -0.08
CXCL12-202ENST00000374426 NEDD8-MDP1E9PL57 170 aa14.57□□□□□ -0.08
CXCL12-202ENST00000374426 CACNG3O60359 315 aa14.57□□□□□ -0.08
CXCL12-202ENST00000374426 SERPINF2P08697 491 aa14.57□□□□□ -0.08
CXCL12-202ENST00000374426 NDUFV2P19404 249 aa14.57□□□□□ -0.08
CXCL12-202ENST00000374426 ZNF33AQ06730 810 aa14.57□□□□□ -0.08
CXCL12-202ENST00000374426 STK4Q13043 487 aa14.57□□□□□ -0.08
CXCL12-202ENST00000374426 DUOXA1Q1HG43 343 aa14.57□□□□□ -0.08
CXCL12-202ENST00000374426 ZACNQ401N2 412 aa14.57□□□□□ -0.08
CXCL12-202ENST00000374426 KIAA1211LQ6NV74 962 aa14.57□□□□□ -0.08
CXCL12-202ENST00000374426 SLC36A4Q6YBV0 504 aa14.57□□□□□ -0.08
CXCL12-202ENST00000374426 GPRIN1Q7Z2K8 1008 aa14.57□□□□□ -0.08
CXCL12-202ENST00000374426 C12orf29Q8N999 325 aa14.57□□□□□ -0.08
CXCL12-202ENST00000374426 KIAA0895Q8NCT3 520 aa14.57□□□□□ -0.08
CXCL12-202ENST00000374426 CEP76Q8TAP6 659 aa14.57□□□□□ -0.08
CXCL12-202ENST00000374426 TMEM174Q8WUU8 243 aa14.57□□□□□ -0.08
CXCL12-202ENST00000374426 BBS2Q9BXC9 721 aa14.57□□□□□ -0.08
CXCL12-202ENST00000374426 FBXO44Q9H4M3 255 aa14.57□□□□□ -0.08
CXCL12-202ENST00000374426 CYLDQ9NQC7 956 aa14.57□□□□□ -0.08
CXCL12-202ENST00000374426 TLR8Q9NR97 1041 aaKnown RBP14.57□□□□□ -0.08
CXCL12-202ENST00000374426 FAM49BQ9NUQ9 324 aa14.57□□□□□ -0.08
CXCL12-202ENST00000374426 OSER1Q9NX31 292 aa14.57□□□□□ -0.08
CXCL12-202ENST00000374426 MARK1Q9P0L2 795 aa14.57□□□□□ -0.08
CXCL12-202ENST00000374426 SLC6A14Q9UN76 642 aa14.57□□□□□ -0.08
CXCL12-202ENST00000374426 FASNP49327 2511 aaKnown RBP14.57□□□□□ -0.08
CXCL12-202ENST00000374426 SPAARA0A1B0GVQ0 90 aa14.56□□□□□ -0.08
CXCL12-202ENST00000374426 TMEM8BA6NDV4 472 aa14.56□□□□□ -0.08
CXCL12-202ENST00000374426 HHLA1C9JL84 531 aa14.56□□□□□ -0.08
CXCL12-202ENST00000374426 HYAL3O43820 417 aaPredicted RBP14.56□□□□□ -0.08
CXCL12-202ENST00000374426 KLRC4O43908 158 aa14.56□□□□□ -0.08
CXCL12-202ENST00000374426 CENPBP07199 599 aaPredicted RBP14.56□□□□□ -0.08
CXCL12-202ENST00000374426 P4HA1P13674 534 aa14.56□□□□□ -0.08
CXCL12-202ENST00000374426 TYRP14679 529 aa14.56□□□□□ -0.08
CXCL12-202ENST00000374426 ASPAP45381 313 aa14.56□□□□□ -0.08
CXCL12-202ENST00000374426 SIM1P81133 766 aaPredicted RBP14.56□□□□□ -0.08
CXCL12-202ENST00000374426 GFPT1Q06210 699 aaPredicted RBP14.56□□□□□ -0.08
CXCL12-202ENST00000374426 SGSM1Q2NKQ1 1148 aa14.56□□□□□ -0.08
CXCL12-202ENST00000374426 FOXD4L6Q3SYB3 417 aaPredicted RBP14.56□□□□□ -0.08
CXCL12-202ENST00000374426 FOXD4L5Q5VV16 416 aaPredicted RBP14.56□□□□□ -0.08
CXCL12-202ENST00000374426 RESP18Q5W5W9 173 aa14.56□□□□□ -0.08
CXCL12-202ENST00000374426 SPOPLQ6IQ16 392 aa14.56□□□□□ -0.08
CXCL12-202ENST00000374426 FOXD4L3Q6VB84 417 aaPredicted RBP14.56□□□□□ -0.08
CXCL12-202ENST00000374426 TPGS1Q6ZTW0 290 aa14.56□□□□□ -0.08
CXCL12-202ENST00000374426 TOGARAM2Q6ZUX3 1019 aa14.56□□□□□ -0.08
CXCL12-202ENST00000374426 SV2AQ7L0J3 742 aa14.56□□□□□ -0.08
CXCL12-202ENST00000374426 UNC93AQ86WB7 457 aa14.56□□□□□ -0.08
CXCL12-202ENST00000374426 SLC9A9Q8IVB4 645 aa14.56□□□□□ -0.08
CXCL12-202ENST00000374426 SLC41A1Q8IVJ1 513 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms