RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 OXA1LQ15070 435 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 RARS2Q5T160 578 aaKnown RBP9.9□□□□□ -0.82
SF3A3-201ENST00000373019 ITIH5Q86UX2 942 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 MCF2L2Q86YR7 1114 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 TMEM126BQ8IUX1 230 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 ADCY4Q8NFM4 1077 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 NLGN2Q8NFZ4 835 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 TDRD1Q9BXT4 1180 aaKnown RBP9.9□□□□□ -0.82
SF3A3-201ENST00000373019 RAB34Q9BZG1 259 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 SHCBP1LQ9BZQ2 653 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 INTS2Q9H0H0 1204 aaKnown RBP9.9□□□□□ -0.82
SF3A3-201ENST00000373019 PALMDQ9NP74 551 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 A0A1W2PPW3 197 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 H3BMQ9 156 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 TGFB1I1O43294 461 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 GUCY1B2O75343 617 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 RALAP11233 206 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 CCDC130P13994 396 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 ZNF26P17031 533 aaPredicted RBP9.9□□□□□ -0.82
SF3A3-201ENST00000373019 PSMC3P17980 439 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 BNIP3Q12983 259 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 MOGQ16653 247 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 CCDC33Q8N5R6 958 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 KBTBD7Q8WVZ9 684 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 HPS1Q92902 700 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 APOPT1Q96IL0 206 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 COG8Q96MW5 612 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 DOK1Q99704 481 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 PSD2Q9BQI7 771 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 C6orf50Q9HD87 102 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 EPS15L1Q9UBC2 864 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 IFT52Q9Y366 437 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 PCDHGA3Q9Y5H0 932 aa9.9□□□□□ -0.82
SF3A3-201ENST00000373019 MYO3BQ8WXR4 1341 aa9.9□□□□□ -0.83
SF3A3-201ENST00000373019 POTEB3A0JP26 581 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 CALUO43852 315 aaPredicted RBP9.89□□□□□ -0.83
SF3A3-201ENST00000373019 BMP10O95393 424 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 STAT3P40763 770 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 PCYT1AP49585 367 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 COPAP53621 1224 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 TUBA4AP68366 448 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 MSS51Q4VC12 460 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 ZNF394Q53GI3 561 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 POTEBQ6S5H4 581 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 TFB1MQ8WVM0 346 aaKnown RBP9.89□□□□□ -0.83
SF3A3-201ENST00000373019 COPS7BQ9H9Q2 264 aaPredicted RBP9.89□□□□□ -0.83
SF3A3-201ENST00000373019 RABL2AQ9UBK7 228 aaPredicted RBP9.89□□□□□ -0.83
SF3A3-201ENST00000373019 GLRA2P23416 452 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 CDK18Q07002 472 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 SELENBP1Q13228 472 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 ALCAMQ13740 583 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 LSM12Q3MHD2 195 aaKnown RBP9.89□□□□□ -0.83
SF3A3-201ENST00000373019 ANKRD26P1Q6NSI1 321 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 TRIM72Q6ZMU5 477 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 CARM1Q86X55 608 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 OR7G1Q8NGA0 311 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 ZNF641Q96N77 438 aaPredicted RBP9.89□□□□□ -0.83
SF3A3-201ENST00000373019 RILPQ96NA2 401 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 CAAP1Q9H8G2 361 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 PACSIN3Q9UKS6 424 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 MTMR7Q9Y216 660 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 TIMM44O43615 452 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 ERBB2P04626 1255 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 EPHA3P29320 983 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 ITGADQ13349 1161 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 ZBED5Q49AG3 693 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 FRMD7Q6ZUT3 714 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 RFPL4BQ6ZWI9 263 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 REXO1Q8N1G1 1221 aaKnown RBP9.89□□□□□ -0.83
SF3A3-201ENST00000373019 SLC43A3Q8NBI5 491 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 TRUB1Q8WWH5 349 aaKnown RBP9.89□□□□□ -0.83
SF3A3-201ENST00000373019 NLRP7Q8WX94 980 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 LRGUKQ96M69 825 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 OLFM1Q99784 485 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 PKP2Q99959 881 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 RUSC1Q9BVN2 902 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 ACSS3Q9H6R3 686 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 XAB2Q9HCS7 855 aaKnown RBP9.89□□□□□ -0.83
SF3A3-201ENST00000373019 ITGA11Q9UKX5 1188 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 SORCS3Q9UPU3 1222 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 AFG3L2Q9Y4W6 797 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 MROH5Q6ZUA9 1318 aa9.89□□□□□ -0.83
SF3A3-201ENST00000373019 SGPL1O95470 568 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 APOEP02649 317 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 EIF2S1P05198 315 aaKnown RBP9.88□□□□□ -0.83
SF3A3-201ENST00000373019 NR4A1P22736 598 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 L1CAMP32004 1257 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 TUFMP49411 452 aaKnown RBP9.88□□□□□ -0.83
SF3A3-201ENST00000373019 MXI1P50539 228 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 RNASEH2BQ5TBB1 312 aaKnown RBP9.88□□□□□ -0.83
SF3A3-201ENST00000373019 SETD3Q86TU7 594 aaPredicted RBP9.88□□□□□ -0.83
SF3A3-201ENST00000373019 ZBTB46Q86UZ6 589 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 ZNF34Q8IZ26 560 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 RIC8BQ9NVN3 520 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 DNMT3BQ9UBC3 853 aaKnown RBP9.88□□□□□ -0.83
SF3A3-201ENST00000373019 NOCTQ9UK39 431 aaKnown RBP9.88□□□□□ -0.83
SF3A3-201ENST00000373019 EXOC7Q9UPT5 735 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 RABGAP1Q9Y3P9 1069 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 CYB561D2O14569 222 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 SNNO75324 88 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms