RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 ETNPPLQ8TBG4 499 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 CCDC110Q8TBZ0 833 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 SEMA4DQ92854 862 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 ZNF696Q9H7X3 374 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 KMT5AQ9NQR1 393 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 DMAC2Q9NW81 257 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 WRAP73Q9P2S5 460 aaPredicted RBP9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 PPME1Q9Y570 386 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 A6NL46 340 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 INO80B-WBP1J3KQ70 363 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 K7EPI3 171 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 MSH4O15457 936 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 CCNT2O60583 730 aaKnown RBP9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 ATP2B4P23634 1241 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 GMPRP36959 345 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 GDF10P55107 478 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 GPS1Q13098 491 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 RNASEH2BQ5TBB1 312 aaKnown RBP9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 CC2D2BQ6DHV5 1058 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 ADGRD1Q6QNK2 874 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 CLEC4GQ6UXB4 293 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 CDAN1Q8IWY9 1227 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 FAM110BQ8TC76 370 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 TFB1MQ8WVM0 346 aaKnown RBP9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 LENG9Q96B70 501 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 PPP1R14BQ96C90 147 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 CNBD2Q96M20 576 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 NLRP4Q96MN2 994 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 ARPC5LQ9BPX5 153 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 TEKT3Q9BXF9 490 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 INO80BQ9C086 356 aaPredicted RBP9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 UNKQ9C0B0 810 aaKnown RBP9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 C1orf112Q9NSG2 853 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 TBCCD1Q9NVR7 557 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 POMPQ9Y244 141 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 MYH9P35579 1960 aaKnown RBP9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 SDR42E2A6NKP2 422 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 H7C0C1 242 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 KRT1P04264 644 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 CYP3A4P08684 503 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 ATP5OP48047 213 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 EPHB1P54762 984 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 TRIP10Q15642 601 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 CLEC16AQ2KHT3 1053 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 GPATCH4Q5T3I0 446 aaKnown RBP9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 SWSAP1Q6NVH7 229 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 BTLAQ7Z6A9 289 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 SLC26A7Q8TE54 656 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 RSAD2Q8WXG1 361 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 NT5C1BQ96P26 610 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 TRIM55Q9BYV6 548 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 GLIS2Q9BZE0 524 aaPredicted RBP9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 WDR11Q9BZH6 1224 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 RIOX1Q9H6W3 641 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 ACSS2Q9NR19 701 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 SACM1LQ9NTJ5 587 aa9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 RBMX2Q9Y388 322 aaKnown RBP9.08□□□□□ -0.96
SMARCA1-203ENST00000371123 MAFGO15525 162 aa9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 TGDSO95455 350 aa9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 WEE2P0C1S8 567 aa9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 PTPN1P18031 435 aaKnown RBP9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 PHKA2P46019 1235 aa9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 ALDH3B2P48448 385 aa9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 CDH15P55291 814 aa9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 CYP4A22Q5TCH4 519 aa9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 NEPROQ6NW34 567 aa9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 PPP4R3CPQ6ZMV5 832 aa9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 FASTKD5Q7L8L6 764 aaKnown RBP9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 SLFN12Q8IYM2 578 aa9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 NACA2Q9H009 215 aa9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 VPS11Q9H270 941 aa9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 SIAEQ9HAT2 523 aa9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 TYW1Q9NV66 732 aaKnown RBP9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 ATF5Q9Y2D1 282 aaPredicted RBP9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 MTO1Q9Y2Z2 717 aaKnown RBP9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 PTPRFP10586 1907 aa9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 HMX2A2RU54 273 aa9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 ATP2A1O14983 1001 aa9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 ALOX15BO15296 676 aa9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 ATE1O95260 518 aa9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 EPHA3P29320 983 aa9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 L1CAMP32004 1257 aa9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 SLC10A2Q12908 348 aaPredicted RBP9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 CLPPQ16740 277 aaPredicted RBP9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 ITPRIPL1Q6GPH6 555 aa9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 HACE1Q8IYU2 909 aa9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 TRIM56Q9BRZ2 755 aaKnown RBP9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 RIMS3Q9UJD0 308 aa9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 NFASCO94856 1347 aa9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 MYO9BQ13459 2157 aa9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 POLRMTO00411 1230 aaKnown RBP9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 SLC16A3O15427 465 aaKnown RBP9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 CFLARO15519 480 aa9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 PEX1O43933 1283 aa9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 ADCY3O60266 1144 aa9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 UGT1A9O60656 530 aa9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 RPS6KA4O75676 772 aa9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 CAPNS1P04632 268 aa9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 PCP11498 1178 aaKnown RBP9.07□□□□□ -0.96
SMARCA1-203ENST00000371123 ITGAXP20702 1163 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms