RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 KATNAL1Q9BW62 490 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 TASP1Q9H6P5 420 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 WDCPQ9H6R7 721 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 VTA1Q9NP79 307 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 TJP2Q9UDY2 1190 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 BCAP29Q9UHQ4 241 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 TSR3Q9UJK0 312 aaKnown RBP8.76□□□□□ -1.01
PTPRK-206ENST00000368215 GRID1Q9ULK0 1009 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 MTO1Q9Y2Z2 717 aaKnown RBP8.76□□□□□ -1.01
PTPRK-206ENST00000368215 PPME1Q9Y570 386 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 LRCH4O75427 683 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 CPB1P15086 417 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 PAMP19021 973 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 PCSK1P29120 753 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 ZNF143P52747 638 aaPredicted RBP8.76□□□□□ -1.01
PTPRK-206ENST00000368215 HADHBP55084 474 aaKnown RBP8.76□□□□□ -1.01
PTPRK-206ENST00000368215 RPL10AP62906 217 aaKnown RBP8.76□□□□□ -1.01
PTPRK-206ENST00000368215 PPP1R26Q5T8A7 1209 aaPredicted RBP8.76□□□□□ -1.01
PTPRK-206ENST00000368215 PRCCQ92733 491 aaPredicted RBP8.76□□□□□ -1.01
PTPRK-206ENST00000368215 CELF6Q96J87 481 aaKnown RBP8.76□□□□□ -1.01
PTPRK-206ENST00000368215 SNRNP25Q9BV90 132 aaKnown RBP8.76□□□□□ -1.01
PTPRK-206ENST00000368215 C12orf65Q9H3J6 166 aaKnown RBP8.76□□□□□ -1.01
PTPRK-206ENST00000368215 ABHD16BQ9H3Z7 469 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 SP110Q9HB58 689 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 GBA2Q9HCG7 927 aaPredicted RBP8.76□□□□□ -1.01
PTPRK-206ENST00000368215 LRRC4CQ9HCJ2 640 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.76□□□□□ -1.01
PTPRK-206ENST00000368215 DRG1Q9Y295 367 aaKnown RBP8.76□□□□□ -1.01
PTPRK-206ENST00000368215 SNCAIPQ9Y6H5 919 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 MYH11P35749 1972 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 CPT1AP50416 773 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 ATXN3P54252 364 aaPredicted RBP8.76□□□□□ -1.01
PTPRK-206ENST00000368215 STX1BP61266 288 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 PRAMEP78395 509 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 PPIL2Q13356 520 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 DBN1Q16643 649 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 C1orf220Q5T0J3 134 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 TXNRD3NBQ6F5E7 133 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 ZCCHC23Q6ZST2 131 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 NSL1Q96IY1 281 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 TMEM120AQ9BXJ8 343 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 OSBPL1AQ9BXW6 950 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 ELOVL4Q9GZR5 314 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 CPSF2Q9P2I0 782 aaKnown RBP8.76□□□□□ -1.01
PTPRK-206ENST00000368215 TRIM33Q9UPN9 1127 aa8.76□□□□□ -1.01
PTPRK-206ENST00000368215 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.76□□□□□ -1.01
PTPRK-206ENST00000368215 WDR27A2RRH5 827 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 SDR42E2A6NKP2 422 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 MTA2O94776 668 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 JCHAINP01591 159 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 TGM2P21980 687 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 THPOP40225 353 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 KPNA2P52292 529 aaKnown RBP8.75□□□□□ -1.01
PTPRK-206ENST00000368215 OCRLQ01968 901 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 KLC3Q6P597 504 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 SKA2Q8WVK7 121 aaPredicted RBP8.75□□□□□ -1.01
PTPRK-206ENST00000368215 MYLK2Q9H1R3 596 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 SLC38A7Q9NVC3 462 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 DDX43Q9NXZ2 648 aaKnown RBP8.75□□□□□ -1.01
PTPRK-206ENST00000368215 PLCH1Q4KWH8 1693 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 PTPRJQ12913 1337 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 SMIM24O75264 130 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 ARIH2O95376 493 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 LMNAP02545 664 aaKnown RBP8.75□□□□□ -1.01
PTPRK-206ENST00000368215 TPH1P17752 444 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 CCND1P24385 295 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 ICAM3P32942 547 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 SPRP35270 261 aaPredicted RBP8.75□□□□□ -1.01
PTPRK-206ENST00000368215 ABCG1P45844 678 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 KCNJ2P63252 427 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 FSCBQ5H9T9 825 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 ACAD11Q709F0 780 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 TLK2Q86UE8 772 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 PTPRN2Q92932 1015 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 C18orf25Q96B23 403 aaPredicted RBP8.75□□□□□ -1.01
PTPRK-206ENST00000368215 FBXL18Q96ME1 805 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 SRPK1Q96SB4 655 aaKnown RBP8.75□□□□□ -1.01
PTPRK-206ENST00000368215 FRMD8Q9BZ67 464 aaPredicted RBP8.75□□□□□ -1.01
PTPRK-206ENST00000368215 UNKQ9C0B0 810 aaKnown RBP8.75□□□□□ -1.01
PTPRK-206ENST00000368215 ABI2Q9NYB9 513 aaPredicted RBP8.75□□□□□ -1.01
PTPRK-206ENST00000368215 PDE4DIPQ5VU43 2346 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 ATP6V1G2O95670 118 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 POMCP01189 267 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 ITGAVP06756 1048 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 GHRP10912 638 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 NRLP54845 237 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 AQP5P55064 265 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 IL31Q6EBC2 164 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 MTHFD1LQ6UB35 978 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 RAB44Q7Z6P3 723 aaPredicted RBP8.75□□□□□ -1.01
PTPRK-206ENST00000368215 SPOCK2Q92563 424 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 ATP6V1E2Q96A05 226 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 IFT43Q96FT9 208 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 RNF157Q96PX1 679 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 MRPL45Q9BRJ2 306 aaKnown RBP8.75□□□□□ -1.01
PTPRK-206ENST00000368215 GOLGA2P5Q9HBQ8 144 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 TMEM51Q9NW97 253 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 ARMCX1Q9P291 453 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 SCOCQ9UIL1 159 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 TTLL13PA6NNM8 815 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms