RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 POU5F1BQ06416 359 aa18.37■□□□□ 0.53
GYPC-202ENST00000356887 TAF11Q15544 211 aa18.37■□□□□ 0.53
GYPC-202ENST00000356887 BOLA3Q53S33 107 aa18.37■□□□□ 0.53
GYPC-202ENST00000356887 CAND1Q86VP6 1230 aaKnown RBP18.37■□□□□ 0.53
GYPC-202ENST00000356887 MIS12Q9H081 205 aa18.37■□□□□ 0.53
GYPC-202ENST00000356887 PDZD7Q9H5P4 517 aa18.37■□□□□ 0.53
GYPC-202ENST00000356887 PLAC1Q9HBJ0 212 aa18.37■□□□□ 0.53
GYPC-202ENST00000356887 POPDC2Q9HBU9 364 aa18.37■□□□□ 0.53
GYPC-202ENST00000356887 ZNF180Q9UJW8 692 aa18.37■□□□□ 0.53
GYPC-202ENST00000356887 BCLAF3A2AJT9 711 aaKnown RBP18.36■□□□□ 0.53
GYPC-202ENST00000356887 CXorf49A8MYA2 514 aaPredicted RBP18.36■□□□□ 0.53
GYPC-202ENST00000356887 DPYSL4O14531 572 aa18.36■□□□□ 0.53
GYPC-202ENST00000356887 TRDMT1O14717 391 aaKnown RBP18.36■□□□□ 0.53
GYPC-202ENST00000356887 GRAP2O75791 330 aa18.36■□□□□ 0.53
GYPC-202ENST00000356887 C22orf31O95567 290 aa18.36■□□□□ 0.53
GYPC-202ENST00000356887 RBL1P28749 1068 aa18.36■□□□□ 0.53
GYPC-202ENST00000356887 SERPINB3P29508 390 aa18.36■□□□□ 0.53
GYPC-202ENST00000356887 MAGEA6P43360 314 aa18.36■□□□□ 0.53
GYPC-202ENST00000356887 PHKA2P46019 1235 aa18.36■□□□□ 0.53
GYPC-202ENST00000356887 KRT72Q14CN4 511 aa18.36■□□□□ 0.53
GYPC-202ENST00000356887 CDO1Q16878 200 aa18.36■□□□□ 0.53
GYPC-202ENST00000356887 GADL1Q6ZQY3 521 aa18.36■□□□□ 0.53
GYPC-202ENST00000356887 C4orf50Q6ZRC1 276 aa18.36■□□□□ 0.53
GYPC-202ENST00000356887 PPM1NQ8N819 430 aa18.36■□□□□ 0.53
GYPC-202ENST00000356887 USP6NLQ92738 828 aa18.36■□□□□ 0.53
GYPC-202ENST00000356887 SRPK1Q96SB4 655 aaKnown RBP18.36■□□□□ 0.53
GYPC-202ENST00000356887 TSPAN16Q9UKR8 245 aa18.36■□□□□ 0.53
GYPC-202ENST00000356887 COPEO14579 308 aa18.35■□□□□ 0.53
GYPC-202ENST00000356887 APOL1O14791 398 aa18.35■□□□□ 0.53
GYPC-202ENST00000356887 ENTPD5O75356 428 aa18.35■□□□□ 0.53
GYPC-202ENST00000356887 CSDE1O75534 798 aaKnown RBP18.35■□□□□ 0.53
GYPC-202ENST00000356887 SNRPAP09012 282 aaKnown RBP18.35■□□□□ 0.53
GYPC-202ENST00000356887 NEFHP12036 1026 aa18.35■□□□□ 0.53
GYPC-202ENST00000356887 PRKCHP24723 683 aa18.35■□□□□ 0.53
GYPC-202ENST00000356887 GCLCP48506 637 aaPredicted RBP18.35■□□□□ 0.53
GYPC-202ENST00000356887 SLC9A4Q6AI14 798 aa18.35■□□□□ 0.53
GYPC-202ENST00000356887 CDHR3Q6ZTQ4 885 aa18.35■□□□□ 0.53
GYPC-202ENST00000356887 PCDH19Q8TAB3 1148 aa18.35■□□□□ 0.53
GYPC-202ENST00000356887 TEKT4Q8WW24 435 aa18.35■□□□□ 0.53
GYPC-202ENST00000356887 NAF1Q96HR8 494 aaKnown RBP18.35■□□□□ 0.53
GYPC-202ENST00000356887 RNPEPQ9H4A4 650 aa18.35■□□□□ 0.53
GYPC-202ENST00000356887 PCDH18Q9HCL0 1135 aa18.35■□□□□ 0.53
GYPC-202ENST00000356887 ETNK2Q9NVF9 386 aa18.35■□□□□ 0.53
GYPC-202ENST00000356887 GPATCH2LQ9NWQ4 482 aa18.35■□□□□ 0.53
GYPC-202ENST00000356887 ZC3H7BQ9UGR2 993 aaKnown RBP18.35■□□□□ 0.53
GYPC-202ENST00000356887 EVPLQ92817 2033 aa18.35■□□□□ 0.53
GYPC-202ENST00000356887 GSC2O15499 205 aa18.35■□□□□ 0.53
GYPC-202ENST00000356887 LMNAP02545 664 aaKnown RBP18.35■□□□□ 0.53
GYPC-202ENST00000356887 BCAR1P56945 870 aa18.35■□□□□ 0.53
GYPC-202ENST00000356887 TMEM132DQ14C87 1099 aa18.35■□□□□ 0.53
GYPC-202ENST00000356887 RFWD3Q6PCD5 774 aa18.35■□□□□ 0.53
GYPC-202ENST00000356887 FBXO16Q8IX29 292 aaPredicted RBP18.35■□□□□ 0.53
GYPC-202ENST00000356887 CTAGE3PQ8IX95 158 aa18.35■□□□□ 0.53
GYPC-202ENST00000356887 PRR11Q96HE9 360 aaPredicted RBP18.35■□□□□ 0.53
GYPC-202ENST00000356887 CPB2Q96IY4 423 aa18.35■□□□□ 0.53
GYPC-202ENST00000356887 FAM124BQ9H5Z6 455 aaPredicted RBP18.35■□□□□ 0.53
GYPC-202ENST00000356887 FBXO6Q9NRD1 293 aaPredicted RBP18.35■□□□□ 0.53
GYPC-202ENST00000356887 HEY1Q9Y5J3 304 aa18.35■□□□□ 0.53
GYPC-202ENST00000356887 SCN4AP35499 1836 aa18.34■□□□□ 0.53
GYPC-202ENST00000356887 GLTPD2A6NH11 291 aa18.34■□□□□ 0.53
GYPC-202ENST00000356887 KRT37O76014 449 aa18.34■□□□□ 0.53
GYPC-202ENST00000356887 STAU1O95793 577 aaKnown RBP18.34■□□□□ 0.53
GYPC-202ENST00000356887 SLC25A27O95847 323 aa18.34■□□□□ 0.53
GYPC-202ENST00000356887 OSBPP22059 807 aa18.34■□□□□ 0.53
GYPC-202ENST00000356887 RBP5P82980 135 aa18.34■□□□□ 0.53
GYPC-202ENST00000356887 ZBTB16Q05516 673 aa18.34■□□□□ 0.53
GYPC-202ENST00000356887 FAXCQ5TGI0 409 aa18.34■□□□□ 0.53
GYPC-202ENST00000356887 SCYL2Q6P3W7 929 aa18.34■□□□□ 0.53
GYPC-202ENST00000356887 IFNLR1Q8IU57 520 aaPredicted RBP18.34■□□□□ 0.53
GYPC-202ENST00000356887 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.34■□□□□ 0.53
GYPC-202ENST00000356887 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.34■□□□□ 0.53
GYPC-202ENST00000356887 KHSRPQ92945 711 aaKnown RBP eCLIP18.34■□□□□ 0.532e-7■■■■□ 24.2
GYPC-202ENST00000356887 KLC2Q9H0B6 622 aa18.34■□□□□ 0.53
GYPC-202ENST00000356887 DCLRE1BQ9H816 532 aa18.34■□□□□ 0.53
GYPC-202ENST00000356887 ITGA11Q9UKX5 1188 aa18.34■□□□□ 0.53
GYPC-202ENST00000356887 PLLPQ9Y342 182 aa18.34■□□□□ 0.53
GYPC-202ENST00000356887 DNAJC25-GNG10A0A024R161 153 aa18.34■□□□□ 0.53
GYPC-202ENST00000356887 A0A087WZ62 844 aa18.34■□□□□ 0.53
GYPC-202ENST00000356887 LIN7AO14910 233 aaPredicted RBP18.34■□□□□ 0.53
GYPC-202ENST00000356887 ECM2O94769 699 aaPredicted RBP18.34■□□□□ 0.53
GYPC-202ENST00000356887 ZBED1O96006 694 aa18.34■□□□□ 0.53
GYPC-202ENST00000356887 GSTA2P09210 222 aa18.34■□□□□ 0.53
GYPC-202ENST00000356887 CCNFP41002 786 aa18.34■□□□□ 0.53
GYPC-202ENST00000356887 RGS7P49802 495 aa18.34■□□□□ 0.53
GYPC-202ENST00000356887 CA9Q16790 459 aa18.34■□□□□ 0.53
GYPC-202ENST00000356887 CMPK2Q5EBM0 449 aa18.34■□□□□ 0.53
GYPC-202ENST00000356887 LGSNQ5TDP6 509 aa18.34■□□□□ 0.53
GYPC-202ENST00000356887 FAM91A1Q658Y4 838 aa18.34■□□□□ 0.53
GYPC-202ENST00000356887 OLFML1Q6UWY5 402 aa18.34■□□□□ 0.53
GYPC-202ENST00000356887 TTC39CQ8N584 583 aa18.34■□□□□ 0.53
GYPC-202ENST00000356887 MCUQ8NE86 351 aa18.34■□□□□ 0.53
GYPC-202ENST00000356887 CFAP61Q8NHU2 1237 aa18.34■□□□□ 0.53
GYPC-202ENST00000356887 APBB2Q92870 758 aa18.34■□□□□ 0.53
GYPC-202ENST00000356887 OXNAD1Q96HP4 312 aaPredicted RBP18.34■□□□□ 0.53
GYPC-202ENST00000356887 FDXACB1Q9BRP7 624 aaPredicted RBP18.34■□□□□ 0.53
GYPC-202ENST00000356887 NT5C1AQ9BXI3 368 aa18.34■□□□□ 0.53
GYPC-202ENST00000356887 SMYD2Q9NRG4 433 aa18.34■□□□□ 0.53
GYPC-202ENST00000356887 RFPL1O75677 317 aa18.33■□□□□ 0.52
GYPC-202ENST00000356887 LUC7L3O95232 432 aaKnown RBP18.33■□□□□ 0.52
GYPC-202ENST00000356887 TXNP10599 105 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms