RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 SLC45A4Q5BKX6 768 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 AARS2Q5JTZ9 985 aaKnown RBP10.05□□□□□ -0.8
GABPA-201ENST00000354828 EPM2AIP1Q7L775 607 aaPredicted RBP10.05□□□□□ -0.8
GABPA-201ENST00000354828 NUP93Q8N1F7 819 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 B3GALNT2Q8NCR0 500 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 LZICQ8WZA0 190 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 C1QTNF7Q9BXJ2 289 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 PKD2L2Q9NZM6 624 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 CHMP2BQ9UQN3 213 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 SERPINF2P08697 491 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 GZMAP12544 262 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 NPR3P17342 541 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 GPM6BQ13491 265 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 GPR158Q5T848 1215 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 ACBD5Q5T8D3 534 aaPredicted RBP10.05□□□□□ -0.8
GABPA-201ENST00000354828 MRNIPQ6NTE8 343 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 C4orf22Q6V702 233 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 C11orf96Q7Z7L8 435 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 ARHGEF19Q8IW93 802 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 MAB21L3Q8N8X9 362 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 CLEC4DQ8WXI8 215 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 MS4A14Q96JA4 679 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 RBM15Q96T37 977 aaKnown RBP eCLIP10.05□□□□□ -0.88e-10■■■■■ 39.7
GABPA-201ENST00000354828 HSD17B14Q9BPX1 270 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 AKAP7Q9P0M2 348 aaPredicted RBP10.05□□□□□ -0.8
GABPA-201ENST00000354828 COL20A1Q9P218 1284 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 SUPT3HB4E1H0 165 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 NCAM2O15394 837 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 SUPT3HO75486 399 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 KITP10721 976 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 FGFR1P11362 822 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 ICAM3P32942 547 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 FDFT1P37268 417 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 DENND1CQ8IV53 801 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 BCAS4Q8TDM0 211 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 BBS2Q9BXC9 721 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 CNOT10Q9H9A5 744 aaKnown RBP10.05□□□□□ -0.8
GABPA-201ENST00000354828 RRAGDQ9NQL2 400 aaPredicted RBP10.05□□□□□ -0.8
GABPA-201ENST00000354828 EPS15L1Q9UBC2 864 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 NEU2Q9Y3R4 380 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 A0A087X0T9 212 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 PSTPIP1O43586 416 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 FAM228BP0C875 321 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 EPB42P16452 691 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 ZNF268Q14587 947 aaPredicted RBP10.04□□□□□ -0.8
GABPA-201ENST00000354828 CLEC16AQ2KHT3 1053 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 SPDYE7PQ495Y7 208 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 ERMARDQ5T6L9 678 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 CLEC17AQ6ZS10 378 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 NPLOC4Q8TAT6 608 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 C18orf25Q96B23 403 aaPredicted RBP10.04□□□□□ -0.8
GABPA-201ENST00000354828 ZFP42Q96MM3 310 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 ADAM33Q9BZ11 813 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 TKTL2Q9H0I9 626 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 TXNRD2Q9NNW7 524 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 AASDHPPTQ9NRN7 309 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 SRP72O76094 671 aaKnown RBP10.04□□□□□ -0.8
GABPA-201ENST00000354828 CRTAMO95727 393 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 CTSEP14091 401 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 STIP1P31948 543 aaKnown RBP10.04□□□□□ -0.8
GABPA-201ENST00000354828 PSEN1P49768 467 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 SLC6A3Q01959 620 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 EIF2B5Q13144 721 aaKnown RBP10.04□□□□□ -0.8
GABPA-201ENST00000354828 ALS2CLQ60I27 953 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 ILDR2Q71H61 639 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 NUDCD3Q8IVD9 361 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 SLC26A7Q8TE54 656 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 PPP1R16AQ96I34 528 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 APOL2Q9BQE5 337 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 C2orf49Q9BVC5 232 aaPredicted RBP10.04□□□□□ -0.8
GABPA-201ENST00000354828 GOLGA2P5Q9HBQ8 144 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 TRMT6Q9UJA5 497 aaKnown RBP10.04□□□□□ -0.8
GABPA-201ENST00000354828 INTUQ9ULD6 942 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 CACNA1FO60840 1977 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 GTPBP10A4D1E9 387 aaKnown RBP10.04□□□□□ -0.8
GABPA-201ENST00000354828 E5RJQ4 531 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 PLEKP08567 350 aaPredicted RBP10.04□□□□□ -0.8
GABPA-201ENST00000354828 HSPA1AP0DMV8 641 aaKnown RBP10.04□□□□□ -0.8
GABPA-201ENST00000354828 HSPA1BP0DMV9 641 aaKnown RBP10.04□□□□□ -0.8
GABPA-201ENST00000354828 KCNJ1P48048 391 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 AGR3Q8TD06 166 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 ZBTB10Q96DT7 871 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 KDM4CQ9H3R0 1056 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 NSMCE4AQ9NXX6 385 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 CLDND1Q9NY35 253 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 STK39Q9UEW8 545 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 GABRQQ9UN88 632 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 STRCQ7RTU9 1775 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 ROBO3Q96MS0 1386 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 RARS2Q5T160 578 aaKnown RBP10.04□□□□□ -0.8
GABPA-201ENST00000354828 UGT3A1Q6NUS8 523 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 NT5DC3Q86UY8 548 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 KAT2BQ92831 832 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 AHCYL2Q96HN2 611 aaKnown RBP10.04□□□□□ -0.8
GABPA-201ENST00000354828 TRIM51Q9BSJ1 452 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 FICDQ9BVA6 458 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 CLPBQ9H078 707 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 ABCB6Q9NP58 842 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 TRIM10Q9UDY6 481 aa10.04□□□□□ -0.8
GABPA-201ENST00000354828 SNX12Q9UMY4 172 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms