RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 FGFR3P22607 806 aa16.88■□□□□ 0.29
PTCH1-201ENST00000331920 AP3M2P53677 418 aa16.88■□□□□ 0.29
PTCH1-201ENST00000331920 MLPHQ9BV36 600 aaPredicted RBP16.88■□□□□ 0.29
PTCH1-201ENST00000331920 COL17A1Q9UMD9 1497 aaPredicted RBP16.88■□□□□ 0.29
PTCH1-201ENST00000331920 RXRBP28702 533 aa16.88■□□□□ 0.29
PTCH1-201ENST00000331920 KCNJ1P48048 391 aa16.88■□□□□ 0.29
PTCH1-201ENST00000331920 BNC2Q6ZN30 1099 aaPredicted RBP16.88■□□□□ 0.29
PTCH1-201ENST00000331920 RIPOR1Q6ZS17 1223 aa16.88■□□□□ 0.29
PTCH1-201ENST00000331920 EFCAB1Q9HAE3 211 aa16.88■□□□□ 0.29
PTCH1-201ENST00000331920 APEX2Q9UBZ4 518 aa16.88■□□□□ 0.29
PTCH1-201ENST00000331920 ZNF112Q9UJU3 913 aa16.88■□□□□ 0.29
PTCH1-201ENST00000331920 CYP4F2P78329 520 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 CYP4F3Q08477 520 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 NR6A1Q15406 480 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 ZBTB49Q6ZSB9 765 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 TBCDQ9BTW9 1192 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 CIPCQ9C0C6 399 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 CCT8L1PA6NM43 557 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 SCNN1BP51168 640 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 ITGADQ13349 1161 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 KBTBD12Q3ZCT8 623 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 SMYD1Q8NB12 490 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 KCNB2Q92953 911 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 CMTM6Q9NX76 183 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 EHD3Q9NZN3 535 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 RNF181Q9P0P0 153 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 PDP2Q9P2J9 529 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 PLOD3O60568 738 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 MBL2P11226 248 aaPredicted RBP16.87■□□□□ 0.29
PTCH1-201ENST00000331920 ORC1Q13415 861 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 PFKFB3Q16875 520 aaPredicted RBP16.87■□□□□ 0.29
PTCH1-201ENST00000331920 TBCELQ5QJ74 424 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 SEL1L3Q68CR1 1132 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 NAPEPLDQ6IQ20 393 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 MTA3Q9BTC8 594 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 ELOVL6Q9H5J4 265 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 EPB41L4AQ9HCS5 686 aaPredicted RBP16.87■□□□□ 0.29
PTCH1-201ENST00000331920 RPS6KL1Q9Y6S9 549 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 WDR19Q8NEZ3 1342 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 CST8O60676 142 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 SERPINB8P50452 374 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 LIN54Q6MZP7 749 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 BRSK2Q8IWQ3 736 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 ARL10Q8N8L6 244 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 VPS9D1Q9Y2B5 631 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 GMFGO60234 142 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 FAM200BP0CF97 657 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 PDIA6Q15084 440 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 PYDC2Q56P42 97 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 CYP4X1Q8N118 509 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 FAM20AQ96MK3 541 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 NLNQ9BYT8 704 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 HMG20AQ9NP66 347 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 YY1P25490 414 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 GLB1LQ6UWU2 654 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 COL26A1Q96A83 441 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 NOD2Q9HC29 1040 aa16.87■□□□□ 0.29
PTCH1-201ENST00000331920 F5H5T6 163 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 H3BMM5 538 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 RTN3O95197 1032 aaPredicted RBP16.86■□□□□ 0.29
PTCH1-201ENST00000331920 BMP10O95393 424 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 ERCC2P18074 760 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 SLC11A2P49281 568 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 FRMD5Q7Z6J6 570 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 VPS33AQ96AX1 596 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 ZNF512BQ96KM6 892 aaPredicted RBP16.86■□□□□ 0.29
PTCH1-201ENST00000331920 CATSPER2Q96P56 530 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 TDP2O95551 362 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 CD4P01730 458 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 EXOSC10Q01780 885 aaKnown RBP16.86■□□□□ 0.29
PTCH1-201ENST00000331920 CENPIQ92674 756 aaPredicted RBP16.86■□□□□ 0.29
PTCH1-201ENST00000331920 PHF21BQ96EK2 531 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 MNTQ99583 582 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 ELP3Q9H9T3 547 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 ZMYM5Q9UJ78 669 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 ZBTB1Q9Y2K1 713 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 PRKAB1Q9Y478 270 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 MTMR2Q13614 643 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 EIF2S3LQ2VIR3 472 aaKnown RBP16.86■□□□□ 0.29
PTCH1-201ENST00000331920 MRNIPQ6NTE8 343 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 APOBEC3FQ8IUX4 373 aaKnown RBP16.86■□□□□ 0.29
PTCH1-201ENST00000331920 ULK2Q8IYT8 1036 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 PRG2P13727 222 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 GTF2H1P32780 548 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 GPAT2Q6NUI2 795 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 BARGINQ6ZT62 677 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 RPRD1AQ96P16 312 aaPredicted RBP16.86■□□□□ 0.29
PTCH1-201ENST00000331920 PIH1D3Q9NQM4 214 aaKnown RBP16.86■□□□□ 0.29
PTCH1-201ENST00000331920 M0QYT0 321 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 CD2BP2O95400 341 aaKnown RBP16.86■□□□□ 0.29
PTCH1-201ENST00000331920 MIB1Q86YT6 1006 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 INPP4BO15327 924 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 DYNC1LI2O43237 492 aaPredicted RBP16.86■□□□□ 0.29
PTCH1-201ENST00000331920 ATP6V0D2Q8N8Y2 350 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 SGSM3Q96HU1 749 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 PIM2Q9P1W9 311 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 CKBP12277 381 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 GSTM5P46439 218 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 AGKQ53H12 422 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 FOXR1Q6PIV2 292 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms