RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 CALML6Q8TD86 181 aa17.69■□□□□ 0.42
SLC1A4-201ENST00000234256 USP6NLQ92738 828 aa17.69■□□□□ 0.42
SLC1A4-201ENST00000234256 HES6Q96HZ4 224 aa17.69■□□□□ 0.42
SLC1A4-201ENST00000234256 NAT9Q9BTE0 207 aa17.69■□□□□ 0.42
SLC1A4-201ENST00000234256 ERVK-5Q9HDB9 667 aa17.69■□□□□ 0.42
SLC1A4-201ENST00000234256 CASTOR2A6NHX0 329 aa17.68■□□□□ 0.42
SLC1A4-201ENST00000234256 PSMD3O43242 534 aa17.68■□□□□ 0.42
SLC1A4-201ENST00000234256 RHOBTB1O94844 696 aa17.68■□□□□ 0.42
SLC1A4-201ENST00000234256 GTF2BQ00403 316 aa17.68■□□□□ 0.42
SLC1A4-201ENST00000234256 MAMLD1Q13495 774 aa17.68■□□□□ 0.42
SLC1A4-201ENST00000234256 UGCGQ16739 394 aa17.68■□□□□ 0.42
SLC1A4-201ENST00000234256 PTRHD1Q6GMV3 140 aaKnown RBP17.68■□□□□ 0.42
SLC1A4-201ENST00000234256 CYP3A43Q9HB55 503 aa17.68■□□□□ 0.42
SLC1A4-201ENST00000234256 HES2Q9Y543 173 aa17.68■□□□□ 0.42
SLC1A4-201ENST00000234256 HMGCRP04035 888 aa17.68■□□□□ 0.42
SLC1A4-201ENST00000234256 CALB2P22676 271 aa17.68■□□□□ 0.42
SLC1A4-201ENST00000234256 ADIGQ0VDE8 80 aa17.68■□□□□ 0.42
SLC1A4-201ENST00000234256 CNGA2Q16280 664 aa17.68■□□□□ 0.42
SLC1A4-201ENST00000234256 DUPD1Q68J44 220 aa17.68■□□□□ 0.42
SLC1A4-201ENST00000234256 ZPBP2Q6X784 338 aa17.68■□□□□ 0.42
SLC1A4-201ENST00000234256 CNDP1Q96KN2 507 aa17.68■□□□□ 0.42
SLC1A4-201ENST00000234256 KATNAL1Q9BW62 490 aa17.68■□□□□ 0.42
SLC1A4-201ENST00000234256 FHDC1Q9C0D6 1143 aaPredicted RBP17.68■□□□□ 0.42
SLC1A4-201ENST00000234256 UTP6Q9NYH9 597 aaKnown RBP17.68■□□□□ 0.42
SLC1A4-201ENST00000234256 URB1O60287 2271 aaKnown RBP17.68■□□□□ 0.42
SLC1A4-201ENST00000234256 NCF1BA6NI72 391 aaPredicted RBP17.68■□□□□ 0.42
SLC1A4-201ENST00000234256 NCF1CA8MVU1 366 aaPredicted RBP17.68■□□□□ 0.42
SLC1A4-201ENST00000234256 NOL4O94818 638 aa17.68■□□□□ 0.42
SLC1A4-201ENST00000234256 GJB1P08034 283 aa17.68■□□□□ 0.42
SLC1A4-201ENST00000234256 NCF1P14598 390 aaPredicted RBP17.68■□□□□ 0.42
SLC1A4-201ENST00000234256 NFKBIAP25963 317 aa17.68■□□□□ 0.42
SLC1A4-201ENST00000234256 NPNTQ6UXI9 565 aa17.68■□□□□ 0.42
SLC1A4-201ENST00000234256 REPS2Q8NFH8 660 aa17.68■□□□□ 0.42
SLC1A4-201ENST00000234256 CEP19Q96LK0 163 aa17.68■□□□□ 0.42
SLC1A4-201ENST00000234256 NUDT5Q9UKK9 219 aa17.68■□□□□ 0.42
SLC1A4-201ENST00000234256 LZTS1Q9Y250 596 aa17.68■□□□□ 0.42
SLC1A4-201ENST00000234256 ANXA9O76027 345 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 GLRA2P23416 452 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 CSHL1Q14406 222 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 CNBD2Q96M20 576 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 GPR63Q9BZJ6 419 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 CCDC134Q9H6E4 229 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 PTPRHQ9HD43 1115 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 PCDHGB4Q9UN71 923 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 ACOT9Q9Y305 439 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 DTNAQ9Y4J8 743 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 MON2Q7Z3U7 1717 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 MGAT1P26572 445 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 AKT1P31749 480 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 TNFSF9P41273 254 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 PLOD1Q02809 727 aaPredicted RBP17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 ZNF268Q14587 947 aaPredicted RBP17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 GJC2Q5T442 439 aaPredicted RBP17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 DEFB107AQ8IZN7 70 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 CATSPER1Q8NEC5 780 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 SEMA4DQ92854 862 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 CCT7Q99832 543 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 DCDC2Q9UHG0 476 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 WDR27A2RRH5 827 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 SRP72O76094 671 aaKnown RBP17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 TGFB3P10600 412 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 PTK6Q13882 451 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 FUT11Q495W5 492 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 ERMARDQ5T6L9 678 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 NIPA1Q7RTP0 329 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 NETO2Q8NC67 525 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 SLC2A14Q8TDB8 520 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 ATXN2LQ8WWM7 1075 aaKnown RBP17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 MYLK2Q9H1R3 596 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 KIF17Q9P2E2 1029 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 OPLAHO14841 1288 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 KCNJ2P63252 427 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 TDRD10Q5VZ19 366 aaKnown RBP17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 EXOC3L1Q86VI1 746 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 ZNF384Q8TF68 577 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 PHF21BQ96EK2 531 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 BCAS3Q9H6U6 928 aa17.67■□□□□ 0.42
SLC1A4-201ENST00000234256 ZSCAN9O15535 394 aaPredicted RBP17.66■□□□□ 0.42
SLC1A4-201ENST00000234256 CETPP11597 493 aa17.66■□□□□ 0.42
SLC1A4-201ENST00000234256 UBA1P22314 1058 aaKnown RBP17.66■□□□□ 0.42
SLC1A4-201ENST00000234256 TAS2R40P59535 323 aa17.66■□□□□ 0.42
SLC1A4-201ENST00000234256 MGAT5Q09328 741 aa17.66■□□□□ 0.42
SLC1A4-201ENST00000234256 DEFB106AQ8N104 65 aa17.66■□□□□ 0.42
SLC1A4-201ENST00000234256 DNAJB3Q8WWF6 145 aa17.66■□□□□ 0.42
SLC1A4-201ENST00000234256 USP13Q92995 863 aaPredicted RBP17.66■□□□□ 0.42
SLC1A4-201ENST00000234256 TIMM44O43615 452 aa17.66■□□□□ 0.42
SLC1A4-201ENST00000234256 DYNC1I2Q13409 638 aaKnown RBP17.66■□□□□ 0.42
SLC1A4-201ENST00000234256 SNX30Q5VWJ9 437 aa17.66■□□□□ 0.42
SLC1A4-201ENST00000234256 SEL1L3Q68CR1 1132 aa17.66■□□□□ 0.42
SLC1A4-201ENST00000234256 IZUMO2Q6UXV1 221 aa17.66■□□□□ 0.42
SLC1A4-201ENST00000234256 ZNF662Q6ZS27 426 aa17.66■□□□□ 0.42
SLC1A4-201ENST00000234256 SLITRK1Q96PX8 696 aa17.66■□□□□ 0.42
SLC1A4-201ENST00000234256 PCDHB18PQ96TA0 734 aa17.66■□□□□ 0.42
SLC1A4-201ENST00000234256 FRMD8P1Q9BZ68 369 aaPredicted RBP17.66■□□□□ 0.42
SLC1A4-201ENST00000234256 RBM22Q9NW64 420 aaKnown RBP eCLIP17.66■□□□□ 0.42
SLC1A4-201ENST00000234256 SNX13Q9Y5W8 968 aa17.66■□□□□ 0.42
SLC1A4-201ENST00000234256 KNDC1Q76NI1 1749 aa17.66■□□□□ 0.42
SLC1A4-201ENST00000234256 TCRBV7S2A1N4TA0A589 114 aa17.66■□□□□ 0.42
SLC1A4-201ENST00000234256 MEI4A8MW99 385 aa17.66■□□□□ 0.42
SLC1A4-201ENST00000234256 HNRNPCP07910 306 aaKnown RBP eCLIP17.66■□□□□ 0.423e-7■■■■□ 21.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms