RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 LTBP2Q14767 1821 aa18.93■□□□□ 0.62
VIM-201ENST00000224237 ABHD14A-ACY1A0A1B0GW23 586 aa18.92■□□□□ 0.62
VIM-201ENST00000224237 YJEFN3A6XGL0 299 aa18.92■□□□□ 0.62
VIM-201ENST00000224237 E7ENQ6 273 aa18.92■□□□□ 0.62
VIM-201ENST00000224237 CAPN9O14815 690 aa18.92■□□□□ 0.62
VIM-201ENST00000224237 LIASO43766 372 aa18.92■□□□□ 0.62
VIM-201ENST00000224237 CST8O60676 142 aa18.92■□□□□ 0.62
VIM-201ENST00000224237 TIMP1P01033 207 aa18.92■□□□□ 0.62
VIM-201ENST00000224237 FGFR3P22607 806 aa18.92■□□□□ 0.62
VIM-201ENST00000224237 LMNB2Q03252 620 aa18.92■□□□□ 0.62
VIM-201ENST00000224237 KRT17Q04695 432 aa18.92■□□□□ 0.62
VIM-201ENST00000224237 DPYSL3Q14195 570 aa18.92■□□□□ 0.62
VIM-201ENST00000224237 CTXN3Q4LDR2 81 aa18.92■□□□□ 0.62
VIM-201ENST00000224237 ERMARDQ5T6L9 678 aa18.92■□□□□ 0.62
VIM-201ENST00000224237 TMEM173Q86WV6 379 aaPredicted RBP18.92■□□□□ 0.62
VIM-201ENST00000224237 B3GALT6Q96L58 329 aa18.92■□□□□ 0.62
VIM-201ENST00000224237 NPY6RQ99463 290 aa18.92■□□□□ 0.62
VIM-201ENST00000224237 ADAM33Q9BZ11 813 aa18.92■□□□□ 0.62
VIM-201ENST00000224237 OR6C75A6NL08 312 aa18.92■□□□□ 0.62
VIM-201ENST00000224237 DGKIO75912 1065 aa18.92■□□□□ 0.62
VIM-201ENST00000224237 LTFP02788 710 aa18.92■□□□□ 0.62
VIM-201ENST00000224237 OR4Q2P0C623 313 aa18.92■□□□□ 0.62
VIM-201ENST00000224237 EN2P19622 333 aaPredicted RBP18.92■□□□□ 0.62
VIM-201ENST00000224237 GRIK1P39086 918 aa18.92■□□□□ 0.62
VIM-201ENST00000224237 BYSLQ13895 437 aaKnown RBP18.92■□□□□ 0.62
VIM-201ENST00000224237 PM20D1Q6GTS8 502 aa18.92■□□□□ 0.62
VIM-201ENST00000224237 HFE2Q6ZVN8 426 aa18.92■□□□□ 0.62
VIM-201ENST00000224237 BNIPLQ7Z465 357 aa18.92■□□□□ 0.62
VIM-201ENST00000224237 RFX6Q8HWS3 928 aa18.92■□□□□ 0.62
VIM-201ENST00000224237 MAK16Q9BXY0 300 aaKnown RBP18.92■□□□□ 0.62
VIM-201ENST00000224237 MCOLN1Q9GZU1 580 aa18.92■□□□□ 0.62
VIM-201ENST00000224237 ACBD3Q9H3P7 528 aa18.92■□□□□ 0.62
VIM-201ENST00000224237 RRN3Q9NYV6 651 aa18.92■□□□□ 0.62
VIM-201ENST00000224237 USP3Q9Y6I4 520 aa18.92■□□□□ 0.62
VIM-201ENST00000224237 COL4A6Q14031 1691 aa18.91■□□□□ 0.62
VIM-201ENST00000224237 ZNF487B1APH4 448 aa18.91■□□□□ 0.62
VIM-201ENST00000224237 ACRP10323 421 aa18.91■□□□□ 0.62
VIM-201ENST00000224237 RDXP35241 583 aaKnown RBP18.91■□□□□ 0.62
VIM-201ENST00000224237 PTK6Q13882 451 aa18.91■□□□□ 0.62
VIM-201ENST00000224237 KCTD19Q17RG1 926 aaPredicted RBP18.91■□□□□ 0.62
VIM-201ENST00000224237 VSTM1Q6UX27 236 aa18.91■□□□□ 0.62
VIM-201ENST00000224237 FAM71BQ8TC56 605 aa18.91■□□□□ 0.62
VIM-201ENST00000224237 BCL7CQ8WUZ0 217 aaPredicted RBP18.91■□□□□ 0.62
VIM-201ENST00000224237 FAM118BQ9BPY3 351 aa18.91■□□□□ 0.62
VIM-201ENST00000224237 ZNF670Q9BS34 389 aa18.91■□□□□ 0.62
VIM-201ENST00000224237 TRIM62Q9BVG3 475 aa18.91■□□□□ 0.62
VIM-201ENST00000224237 OXCT2Q9BYC2 517 aaPredicted RBP18.91■□□□□ 0.62
VIM-201ENST00000224237 ABI2Q9NYB9 513 aaPredicted RBP18.91■□□□□ 0.62
VIM-201ENST00000224237 DNPEPQ9ULA0 475 aa18.91■□□□□ 0.62
VIM-201ENST00000224237 SNX24Q9Y343 169 aa18.91■□□□□ 0.62
VIM-201ENST00000224237 APOC4-APOC2K7ER74 178 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 KIAA0355O15063 1070 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 APOC2P02655 101 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 FAM153BP0C7A2 387 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 RAG1P15918 1043 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 CYP2F1P24903 491 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 ALDH7A1P49419 539 aaKnown RBP18.9■□□□□ 0.62
VIM-201ENST00000224237 ATXN1P54253 815 aaKnown RBP18.9■□□□□ 0.62
VIM-201ENST00000224237 DYNLT1P63172 113 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 DEFB103AP81534 67 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 TFDP2Q14188 446 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 DPYSL2Q16555 572 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 FAM153CQ494X1 144 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 ZC3H12AQ5D1E8 599 aaKnown RBP18.9■□□□□ 0.62
VIM-201ENST00000224237 SYPL2Q5VXT5 272 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 FAM117BQ6P1L5 589 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 BHLHA9Q7RTU4 235 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 HAUS1Q96CS2 278 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 FAM129AQ9BZQ8 928 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 NEUROG2Q9H2A3 272 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 PCDH18Q9HCL0 1135 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 FAM153AQ9UHL3 310 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 NAALADL1Q9UQQ1 740 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 H7C4K7 107 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 M0QYT0 321 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 EFCAB14O75071 495 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 FYNP06241 537 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 NCAM1P13591 858 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 RPL21P46778 160 aaKnown RBP18.9■□□□□ 0.62
VIM-201ENST00000224237 SLC5A3P53794 718 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 VCPP55072 806 aaKnown RBP18.9■□□□□ 0.62
VIM-201ENST00000224237 OTUD1Q5VV17 481 aaPredicted RBP18.9■□□□□ 0.62
VIM-201ENST00000224237 ZNF365Q70YC5 407 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 PSTKQ8IV42 348 aaKnown RBP18.9■□□□□ 0.62
VIM-201ENST00000224237 MREGQ8N565 214 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.9■□□□□ 0.62
VIM-201ENST00000224237 NKD2Q969F2 451 aaPredicted RBP18.9■□□□□ 0.62
VIM-201ENST00000224237 TOP1MTQ969P6 601 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 FMO2Q99518 471 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 GPATCH2LQ9NWQ4 482 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 CALCOCO1Q9P1Z2 691 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 ASIC3Q9UHC3 531 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 HPCAL4Q9UM19 191 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 AP4E1Q9UPM8 1137 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 DRG1Q9Y295 367 aaKnown RBP18.9■□□□□ 0.62
VIM-201ENST00000224237 PCDHB5Q9Y5E4 795 aa18.9■□□□□ 0.62
VIM-201ENST00000224237 COL4A4P53420 1690 aaPredicted RBP18.89■□□□□ 0.61
VIM-201ENST00000224237 TRIM66O15016 1216 aa18.89■□□□□ 0.61
VIM-201ENST00000224237 AMHP03971 560 aa18.89■□□□□ 0.61
VIM-201ENST00000224237 OTUD4Q01804 1114 aaKnown RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms