RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W PMP3P87284 55 aa0.73□□□□□ -2.29
CTF4YPR135W COX19Q3E731 98 aa0.73□□□□□ -2.29
CTF4YPR135W YMR141CP40211 102 aa0.72□□□□□ -2.29
CTF4YPR135W YNL042W-BQ3E7Z2 85 aa0.72□□□□□ -2.29
CTF4YPR135W YOR034C-AQ3E735 80 aa0.71□□□□□ -2.3
CTF4YPR135W QCR9P22289 66 aa0.71□□□□□ -2.3
CTF4YPR135W YKL065W-AQ2V2P2 73 aa0.71□□□□□ -2.3
CTF4YPR135W YNL198CP40166 100 aa0.7□□□□□ -2.3
CTF4YPR135W YFL041W-AQ3E817 63 aa0.7□□□□□ -2.3
CTF4YPR135W YHR213W-BQ8TGK1 99 aa0.7□□□□□ -2.3
CTF4YPR135W SSS1P35179 80 aa0.7□□□□□ -2.3
CTF4YPR135W YLR342W-AQ3E810 57 aa0.7□□□□□ -2.3
CTF4YPR135W YNL190WP53872 204 aa0.68□□□□□ -2.3
CTF4YPR135W ATP18P81450 59 aa0.68□□□□□ -2.3
CTF4YPR135W COA2Q3E823 68 aa0.68□□□□□ -2.3
CTF4YPR135W RPL37AP49166 88 aaKnown RBP0.68□□□□□ -2.3
CTF4YPR135W YDR246W-AQ3E763 66 aa0.68□□□□□ -2.3
CTF4YPR135W YKL023C-AQ2V2P3 75 aa0.67□□□□□ -2.3
CTF4YPR135W YIL134C-AQ45U18 67 aa0.67□□□□□ -2.3
CTF4YPR135W Q0017Q9ZZX8 53 aa0.67□□□□□ -2.3
CTF4YPR135W COX7P10174 60 aa0.66□□□□□ -2.3
CTF4YPR135W YLR157W-EP0CF00 54 aa0.65□□□□□ -2.3
CTF4YPR135W YJR107C-AP0CT86 78 aa0.65□□□□□ -2.3
CTF4YPR135W PAU7P39545 55 aa0.65□□□□□ -2.31
CTF4YPR135W YBR072C-AQ3E794 53 aa0.65□□□□□ -2.31
CTF4YPR135W YSY6P38374 65 aa0.64□□□□□ -2.31
CTF4YPR135W YIL102C-AQ2V2P5 75 aa0.64□□□□□ -2.31
CTF4YPR135W SDH6Q3E785 79 aa0.64□□□□□ -2.31
CTF4YPR135W EDC1P53080 175 aaPredicted RBP0.63□□□□□ -2.31
CTF4YPR135W VMA9Q3E7B6 73 aa0.63□□□□□ -2.31
CTF4YPR135W ATP17Q06405 101 aa0.63□□□□□ -2.31
CTF4YPR135W YOL164W-AQ3E7A5 60 aa0.63□□□□□ -2.31
CTF4YPR135W RPL38P49167 78 aaKnown RBP0.62□□□□□ -2.31
CTF4YPR135W RPS30AP0CX33 63 aaKnown RBP0.62□□□□□ -2.31
CTF4YPR135W RPS30BP0CX34 63 aaKnown RBP0.62□□□□□ -2.31
CTF4YPR135W YBL039W-BP0C268 59 aa0.61□□□□□ -2.31
CTF4YPR135W YOL097W-AQ3E7Y9 61 aa0.61□□□□□ -2.31
CTF4YPR135W YLR146W-AQ2V2P1 62 aa0.59□□□□□ -2.31
CTF4YPR135W DDR2P89113 61 aa0.59□□□□□ -2.32
CTF4YPR135W TOS6P48560 102 aa0.58□□□□□ -2.32
CTF4YPR135W YDR182W-AQ3E796 67 aa0.58□□□□□ -2.32
CTF4YPR135W YOL166W-AQ8TGJ1 51 aa0.58□□□□□ -2.32
CTF4YPR135W YFR009W-AP0C5M9 85 aa0.57□□□□□ -2.32
CTF4YPR135W RPL29P05747 59 aaPredicted RBP0.57□□□□□ -2.32
CTF4YPR135W YBR016WP38216 128 aa0.57□□□□□ -2.32
CTF4YPR135W HUB1Q6Q546 73 aa0.57□□□□□ -2.32
CTF4YPR135W YOR394C-AQ8TGJ0 55 aa0.54□□□□□ -2.32
CTF4YPR135W YMR001C-AQ8TGS9 76 aa0.53□□□□□ -2.32
CTF4YPR135W YLR157W-DP0CE99 70 aa0.53□□□□□ -2.32
CTF4YPR135W YHR073W-AP0C5N7 58 aa0.52□□□□□ -2.33
CTF4YPR135W YBR230W-AQ3E762 66 aa0.52□□□□□ -2.33
CTF4YPR135W YOR008C-AQ3E7B9 74 aa0.52□□□□□ -2.33
CTF4YPR135W YLL006W-AQ3E814 58 aa0.51□□□□□ -2.33
CTF4YPR135W YBL044WP38194 122 aa0.51□□□□□ -2.33
CTF4YPR135W OLI1P61829 76 aa0.49□□□□□ -2.33
CTF4YPR135W YJL127C-BQ3E828 52 aa0.49□□□□□ -2.33
CTF4YPR135W YCR108CQ3E819 63 aa0.46□□□□□ -2.34
CTF4YPR135W YOR316C-AQ3E806 69 aa0.45□□□□□ -2.34
CTF4YPR135W YML054C-AQ3E809 52 aa0.45□□□□□ -2.34
CTF4YPR135W YGR146C-AQ8TGT9 53 aa0.43□□□□□ -2.34
CTF4YPR135W YJL133C-AQ3E7A3 74 aa0.42□□□□□ -2.34
CTF4YPR135W YOR072W-BQ3E832 53 aa0.38□□□□□ -2.35
CTF4YPR135W YHR050W-AQ05451 56 aa0.32□□□□□ -2.36
Retrieved 63 of 5,963 RNA–protein pairs in 40.7 ms