RNA–Protein interactions for RNA: YNL311C

SKP2, Transcript of F-box protein of unknown function, yeast

Gene SKP2, Length 2,292 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	YNL311C	PAI3	P01094	68 aa		0.81	□□□□□ -2.28
SKP2	YNL311C	RPL38	P49167	78 aa	Known RBP	0.81	□□□□□ -2.28
SKP2	YNL311C	RPA12	P32529	125 aa	Known RBP	0.8	□□□□□ -2.28
SKP2	YNL311C	INO4	P13902	151 aa		0.8	□□□□□ -2.28
SKP2	YNL311C	YGR039W	P53225	103 aa		0.8	□□□□□ -2.28
SKP2	YNL311C	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.8	□□□□□ -2.28
SKP2	YNL311C	SSS1	P35179	80 aa		0.79	□□□□□ -2.28
SKP2	YNL311C	YFL065C	P43539	102 aa		0.79	□□□□□ -2.28
SKP2	YNL311C	YLR412C-A	Q3E742	68 aa		0.79	□□□□□ -2.28
SKP2	YNL311C	MRX7	P53869	86 aa		0.77	□□□□□ -2.29
SKP2	YNL311C	YOR394C-A	Q8TGJ0	55 aa		0.76	□□□□□ -2.29
SKP2	YNL311C	GLC8	P41818	229 aa		0.75	□□□□□ -2.29
SKP2	YNL311C	YOR072W-B	Q3E832	53 aa		0.74	□□□□□ -2.29
SKP2	YNL311C	YIL134C-A	Q45U18	67 aa		0.74	□□□□□ -2.29
SKP2	YNL311C	YPR203W	Q08994	102 aa		0.73	□□□□□ -2.29
SKP2	YNL311C	YLR363W-A	Q3E747	85 aa		0.73	□□□□□ -2.29
SKP2	YNL311C	SBH1	P52870	82 aa		0.72	□□□□□ -2.29
SKP2	YNL311C	YOL013W-A	P0C272	63 aa	Predicted RBP	0.71	□□□□□ -2.3
SKP2	YNL311C	YBR201C-A	Q2V2Q3	67 aa		0.68	□□□□□ -2.3
SKP2	YNL311C	PBI2	P0CT04	75 aa	Known RBP	0.66	□□□□□ -2.3
SKP2	YNL311C	YFL041W-A	Q3E817	63 aa		0.66	□□□□□ -2.3
SKP2	YNL311C	YCR085W	P25650	117 aa		0.66	□□□□□ -2.3
SKP2	YNL311C	SEN15	Q04675	128 aa		0.66	□□□□□ -2.3
SKP2	YNL311C	YMR122C	Q03879	124 aa		0.64	□□□□□ -2.31
SKP2	YNL311C	YIL102C-A	Q2V2P5	75 aa		0.64	□□□□□ -2.31
SKP2	YNL311C	YER188C-A	P0C0V2	99 aa		0.63	□□□□□ -2.31
SKP2	YNL311C	RPS28B	P0C0X0	67 aa	Known RBP	0.63	□□□□□ -2.31
SKP2	YNL311C	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.63	□□□□□ -2.31
SKP2	YNL311C	YEL014C	P39999	101 aa		0.62	□□□□□ -2.31
SKP2	YNL311C	YHR050W-A	Q05451	56 aa		0.62	□□□□□ -2.31
SKP2	YNL311C	ATP17	Q06405	101 aa		0.62	□□□□□ -2.31
SKP2	YNL311C	OST5	Q92316	86 aa		0.61	□□□□□ -2.31
SKP2	YNL311C	YDR119W-A	Q2V2P9	66 aa		0.59	□□□□□ -2.31
SKP2	YNL311C	YGL014C-A	P0C5N1	53 aa		0.59	□□□□□ -2.32
SKP2	YNL311C	HHY1	P39982	102 aa		0.59	□□□□□ -2.32
SKP2	YNL311C	YSY6	P38374	65 aa		0.58	□□□□□ -2.32
SKP2	YNL311C	YOR314W	Q12506	109 aa		0.58	□□□□□ -2.32
SKP2	YNL311C	YOR376W-A	Q3E805	51 aa		0.58	□□□□□ -2.32
SKP2	YNL311C	YLR285C-A	Q3E771	56 aa		0.58	□□□□□ -2.32
SKP2	YNL311C	SOM1	Q05676	74 aa		0.57	□□□□□ -2.32
SKP2	YNL311C	SAE3	P89114	91 aa		0.55	□□□□□ -2.32
SKP2	YNL311C	YNL198C	P40166	100 aa		0.53	□□□□□ -2.32
SKP2	YNL311C	LSM8	P47093	109 aa	Known RBP	0.53	□□□□□ -2.33
SKP2	YNL311C	SDH6	Q3E785	79 aa		0.52	□□□□□ -2.33
SKP2	YNL311C	QCR10	P37299	77 aa		0.51	□□□□□ -2.33
SKP2	YNL311C	NOP10	Q6Q547	58 aa	Predicted RBP	0.49	□□□□□ -2.33
SKP2	YNL311C	HUB1	Q6Q546	73 aa		0.48	□□□□□ -2.33
SKP2	YNL311C	YNL277W-A	Q3E7Z0	62 aa		0.47	□□□□□ -2.33
SKP2	YNL311C	YOL166W-A	Q8TGJ1	51 aa		0.45	□□□□□ -2.34
SKP2	YNL311C	YDR182W-A	Q3E796	67 aa		0.44	□□□□□ -2.34
SKP2	YNL311C	YLR157W-E	P0CF00	54 aa		0.44	□□□□□ -2.34
SKP2	YNL311C	YMR001C-A	Q8TGS9	76 aa		0.44	□□□□□ -2.34
SKP2	YNL311C	YCR108C	Q3E819	63 aa		0.43	□□□□□ -2.34
SKP2	YNL311C	SLO1	Q3E784	85 aa		0.4	□□□□□ -2.34
SKP2	YNL311C	ATX1	P38636	73 aa		0.38	□□□□□ -2.35
SKP2	YNL311C	RUB1	Q03919	77 aa		0.35	□□□□□ -2.35
SKP2	YNL311C	YOL164W-A	Q3E7A5	60 aa		0.34	□□□□□ -2.35
SKP2	YNL311C	YDR246W-A	Q3E763	66 aa		0.34	□□□□□ -2.36
SKP2	YNL311C	YIR021W-A	Q3E739	70 aa		0.32	□□□□□ -2.36
SKP2	YNL311C	YBR072C-A	Q3E794	53 aa		0.3	□□□□□ -2.36
SKP2	YNL311C	YPL038W-A	Q3E7B4	63 aa		0.26	□□□□□ -2.37
SKP2	YNL311C	YCR095W-A	Q3E787	52 aa		0.24	□□□□□ -2.37
SKP2	YNL311C	TOM6	P33448	61 aa		0.12	□□□□□ -2.39

Retrieved 63 of 5,963 RNA–protein pairs in 38.7 ms