RNA–Protein interactions for RNA: YNL288W

CAF40, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CAF40, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF40YNL288W YPL038W-AQ3E7B4 63 aa3.29□□□□□ -1.88
CAF40YNL288W YJL144WP47009 104 aa3.28□□□□□ -1.88
CAF40YNL288W YDR119W-AQ2V2P9 66 aa3.28□□□□□ -1.88
CAF40YNL288W YGR146C-AQ8TGT9 53 aa3.27□□□□□ -1.89
CAF40YNL288W YLR255CO13574 117 aa3.26□□□□□ -1.89
CAF40YNL288W COX8P04039 78 aa3.26□□□□□ -1.89
CAF40YNL288W YGL034CP53186 121 aa3.25□□□□□ -1.89
CAF40YNL288W YHR125WP38831 101 aa3.24□□□□□ -1.89
CAF40YNL288W YDR246W-AQ3E763 66 aa3.24□□□□□ -1.89
CAF40YNL288W YBR016WP38216 128 aa3.23□□□□□ -1.89
CAF40YNL288W YJL009WP47078 108 aa3.23□□□□□ -1.89
CAF40YNL288W YKL065W-AQ2V2P2 73 aa3.23□□□□□ -1.89
CAF40YNL288W YDR182W-AQ3E796 67 aa3.23□□□□□ -1.89
CAF40YNL288W YBL008W-AQ3E821 79 aa3.23□□□□□ -1.89
CAF40YNL288W YOL166W-AQ8TGJ1 51 aa3.23□□□□□ -1.89
CAF40YNL288W AIM4P38305 123 aaPredicted RBP3.21□□□□□ -1.9
CAF40YNL288W YAL067W-AQ8TGK6 75 aa3.2□□□□□ -1.9
CAF40YNL288W OLI1P61829 76 aa3.19□□□□□ -1.9
CAF40YNL288W YDR210WQ03482 75 aa3.18□□□□□ -1.9
CAF40YNL288W YIL156W-BQ2V2P4 73 aa3.18□□□□□ -1.9
CAF40YNL288W TOM6P33448 61 aa3.16□□□□□ -1.9
CAF40YNL288W YFR032C-BQ8TGU2 87 aa3.16□□□□□ -1.9
CAF40YNL288W RPS30AP0CX33 63 aaKnown RBP3.13□□□□□ -1.91
CAF40YNL288W RPS30BP0CX34 63 aaKnown RBP3.13□□□□□ -1.91
CAF40YNL288W SDH6Q3E785 79 aa3.13□□□□□ -1.91
CAF40YNL288W YML054C-AQ3E809 52 aa3.11□□□□□ -1.91
CAF40YNL288W OST5Q92316 86 aa3.11□□□□□ -1.91
CAF40YNL288W MRX7P53869 86 aa3.1□□□□□ -1.91
CAF40YNL288W YBR201C-AQ2V2Q3 67 aa3.1□□□□□ -1.91
CAF40YNL288W YBR121C-AP0C5L4 52 aa3.09□□□□□ -1.91
CAF40YNL288W YMR001C-AQ8TGS9 76 aa3.06□□□□□ -1.92
CAF40YNL288W YBL044WP38194 122 aa3.03□□□□□ -1.92
CAF40YNL288W HUB1Q6Q546 73 aa3.02□□□□□ -1.93
CAF40YNL288W YOR394C-AQ8TGJ0 55 aa2.92□□□□□ -1.94
CAF40YNL288W ATP17Q06405 101 aa2.89□□□□□ -1.95
CAF40YNL288W YMR122CQ03879 124 aa2.86□□□□□ -1.95
CAF40YNL288W RPS29BP41058 56 aaKnown RBP2.85□□□□□ -1.95
CAF40YNL288W YOR381W-AQ3E804 55 aa2.83□□□□□ -1.96
CAF40YNL288W YHR032W-AP0C5N6 59 aa2.82□□□□□ -1.96
CAF40YNL288W RPL37AP49166 88 aaKnown RBP2.81□□□□□ -1.96
CAF40YNL288W YCR095W-AQ3E787 52 aa2.81□□□□□ -1.96
CAF40YNL288W YIR021W-AQ3E739 70 aa2.8□□□□□ -1.96
CAF40YNL288W YER188C-AP0C0V2 99 aa2.79□□□□□ -1.96
CAF40YNL288W RPS29AP41057 56 aaKnown RBP2.78□□□□□ -1.96
CAF40YNL288W YCR108CQ3E819 63 aa2.73□□□□□ -1.97
CAF40YNL288W YEL014CP39999 101 aa2.69□□□□□ -1.98
CAF40YNL288W YOR072W-BQ3E832 53 aa2.68□□□□□ -1.98
CAF40YNL288W SBH1P52870 82 aa2.66□□□□□ -1.98
CAF40YNL288W QCR10P37299 77 aa2.61□□□□□ -1.99
CAF40YNL288W YML100W-AQ8TGT0 57 aa2.61□□□□□ -1.99
CAF40YNL288W RPS28BP0C0X0 67 aaKnown RBP2.58□□□□□ -2
CAF40YNL288W RPS28AQ3E7X9 67 aaPredicted RBP2.58□□□□□ -2
CAF40YNL288W YLR412C-AQ3E742 68 aa2.5□□□□□ -2.01
CAF40YNL288W YHR086W-AQ3E746 53 aa2.48□□□□□ -2.01
CAF40YNL288W HHY1P39982 102 aa2.47□□□□□ -2.01
CAF40YNL288W YGL014C-AP0C5N1 53 aa2.44□□□□□ -2.02
CAF40YNL288W YNL277W-AQ3E7Z0 62 aa2.41□□□□□ -2.02
CAF40YNL288W YBR072C-AQ3E794 53 aa2.39□□□□□ -2.03
CAF40YNL288W SOM1Q05676 74 aa2.37□□□□□ -2.03
CAF40YNL288W YHR050W-AQ05451 56 aa2.22□□□□□ -2.05
CAF40YNL288W YOR376W-AQ3E805 51 aa2.12□□□□□ -2.07
CAF40YNL288W YLR157W-EP0CF00 54 aa1.72□□□□□ -2.13
CAF40YNL288W YOL164W-AQ3E7A5 60 aa1.71□□□□□ -2.14
Retrieved 63 of 5,963 RNA–protein pairs in 35.1 ms