RNA–Protein interactions for RNA: YNL024C-A

KSH1, Transcript of Essential protein suggested to function early in the secretory pathway, yeastyeast

Gene KSH1, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KSH1YNL024C-A RPS30AP0CX33 63 aaKnown RBP3.88□□□□□ -1.79
KSH1YNL024C-A RPS30BP0CX34 63 aaKnown RBP3.88□□□□□ -1.79
KSH1YNL024C-A YOR316C-AQ3E806 69 aa3.88□□□□□ -1.79
KSH1YNL024C-A YNL122CP53921 115 aaPredicted RBP3.87□□□□□ -1.79
KSH1YNL024C-A SDH6Q3E785 79 aa3.87□□□□□ -1.79
KSH1YNL024C-A YGR146C-AQ8TGT9 53 aa3.86□□□□□ -1.79
KSH1YNL024C-A HUB1Q6Q546 73 aa3.85□□□□□ -1.79
KSH1YNL024C-A YLR255CO13574 117 aa3.84□□□□□ -1.79
KSH1YNL024C-A CMC4Q3E7A9 73 aa3.84□□□□□ -1.79
KSH1YNL024C-A YJR128WP47162 119 aa3.83□□□□□ -1.8
KSH1YNL024C-A COX8P04039 78 aa3.82□□□□□ -1.8
KSH1YNL024C-A YKL065W-AQ2V2P2 73 aa3.82□□□□□ -1.8
KSH1YNL024C-A YFR032C-BQ8TGU2 87 aa3.82□□□□□ -1.8
KSH1YNL024C-A YMR001C-AQ8TGS9 76 aa3.8□□□□□ -1.8
KSH1YNL024C-A SBH1P52870 82 aa3.79□□□□□ -1.8
KSH1YNL024C-A OST5Q92316 86 aa3.79□□□□□ -1.8
KSH1YNL024C-A YBL008W-AQ3E821 79 aa3.76□□□□□ -1.81
KSH1YNL024C-A YBR016WP38216 128 aa3.75□□□□□ -1.81
KSH1YNL024C-A OLI1P61829 76 aa3.73□□□□□ -1.81
KSH1YNL024C-A YBR201C-AQ2V2Q3 67 aa3.73□□□□□ -1.81
KSH1YNL024C-A MRX7P53869 86 aa3.72□□□□□ -1.81
KSH1YNL024C-A YMR122CQ03879 124 aa3.72□□□□□ -1.81
KSH1YNL024C-A YOR381W-AQ3E804 55 aa3.71□□□□□ -1.82
KSH1YNL024C-A YIL156W-BQ2V2P4 73 aa3.7□□□□□ -1.82
KSH1YNL024C-A YJL144WP47009 104 aa3.67□□□□□ -1.82
KSH1YNL024C-A YLR412C-AQ3E742 68 aa3.67□□□□□ -1.82
KSH1YNL024C-A Q0017Q9ZZX8 53 aa3.66□□□□□ -1.82
KSH1YNL024C-A YER188C-AP0C0V2 99 aa3.65□□□□□ -1.83
KSH1YNL024C-A RPL37BP51402 88 aaKnown RBP3.65□□□□□ -1.83
KSH1YNL024C-A FYV12Q08559 129 aa3.63□□□□□ -1.83
KSH1YNL024C-A YGL034CP53186 121 aa3.62□□□□□ -1.83
KSH1YNL024C-A YCR095W-AQ3E787 52 aa3.62□□□□□ -1.83
KSH1YNL024C-A ATP17Q06405 101 aa3.57□□□□□ -1.84
KSH1YNL024C-A YBR121C-AP0C5L4 52 aa3.52□□□□□ -1.85
KSH1YNL024C-A YML054C-AQ3E809 52 aa3.51□□□□□ -1.85
KSH1YNL024C-A RPS28BP0C0X0 67 aaKnown RBP3.5□□□□□ -1.85
KSH1YNL024C-A RPS28AQ3E7X9 67 aaPredicted RBP3.5□□□□□ -1.85
KSH1YNL024C-A YJL009WP47078 108 aa3.49□□□□□ -1.85
KSH1YNL024C-A YOR394C-AQ8TGJ0 55 aa3.45□□□□□ -1.86
KSH1YNL024C-A YBL044WP38194 122 aa3.43□□□□□ -1.86
KSH1YNL024C-A YNL277W-AQ3E7Z0 62 aa3.42□□□□□ -1.86
KSH1YNL024C-A YDR210WQ03482 75 aa3.4□□□□□ -1.87
KSH1YNL024C-A QCR10P37299 77 aa3.36□□□□□ -1.87
KSH1YNL024C-A YEL014CP39999 101 aa3.36□□□□□ -1.87
KSH1YNL024C-A YCR108CQ3E819 63 aa3.33□□□□□ -1.88
KSH1YNL024C-A YER175W-AQ8TGU4 54 aa3.33□□□□□ -1.88
KSH1YNL024C-A RPL37AP49166 88 aaKnown RBP3.32□□□□□ -1.88
KSH1YNL024C-A YGL014C-AP0C5N1 53 aa3.25□□□□□ -1.89
KSH1YNL024C-A YOR072W-BQ3E832 53 aa3.24□□□□□ -1.89
KSH1YNL024C-A YML100W-AQ8TGT0 57 aa3.23□□□□□ -1.89
KSH1YNL024C-A SOM1Q05676 74 aa3.13□□□□□ -1.91
KSH1YNL024C-A YOR376W-AQ3E805 51 aa3.1□□□□□ -1.91
KSH1YNL024C-A YBR072C-AQ3E794 53 aa3.07□□□□□ -1.92
KSH1YNL024C-A HHY1P39982 102 aa3.05□□□□□ -1.92
KSH1YNL024C-A RPS29BP41058 56 aaKnown RBP2.94□□□□□ -1.94
KSH1YNL024C-A RPS29AP41057 56 aaKnown RBP2.81□□□□□ -1.96
KSH1YNL024C-A YER078W-AQ3E7A2 54 aa2.69□□□□□ -1.98
KSH1YNL024C-A YHR050W-AQ05451 56 aa2.65□□□□□ -1.99
KSH1YNL024C-A YAL067W-AQ8TGK6 75 aa2.39□□□□□ -2.03
KSH1YNL024C-A YOL164W-AQ3E7A5 60 aa2.26□□□□□ -2.05
KSH1YNL024C-A YLR157W-EP0CF00 54 aa2.14□□□□□ -2.07
KSH1YNL024C-A YHR032W-AP0C5N6 59 aa1.97□□□□□ -2.09
KSH1YNL024C-A YHR086W-AQ3E746 53 aa1.51□□□□□ -2.17
Retrieved 63 of 5,963 RNA–protein pairs in 10.6 ms