RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C COX9P07255 59 aa0.68□□□□□ -2.3
ATG17YLR423C LSM2P38203 95 aaKnown RBP0.67□□□□□ -2.3
ATG17YLR423C ERI1P62651 68 aaKnown RBP0.67□□□□□ -2.3
ATG17YLR423C POC4Q12245 148 aaPredicted RBP0.67□□□□□ -2.3
ATG17YLR423C YOL097W-AQ3E7Y9 61 aa0.67□□□□□ -2.3
ATG17YLR423C YPR145C-AQ2V2P0 78 aa0.66□□□□□ -2.3
ATG17YLR423C YCR085WP25650 117 aa0.64□□□□□ -2.31
ATG17YLR423C SPI1P40092 148 aa0.64□□□□□ -2.31
ATG17YLR423C CWP2P43497 92 aa0.63□□□□□ -2.31
ATG17YLR423C EDC1P53080 175 aaPredicted RBP0.63□□□□□ -2.31
ATG17YLR423C PMP3P87284 55 aa0.63□□□□□ -2.31
ATG17YLR423C YBR200W-AQ3E755 54 aa0.62□□□□□ -2.31
ATG17YLR423C YIL156W-BQ2V2P4 73 aa0.59□□□□□ -2.31
ATG17YLR423C YOR105WQ08504 108 aa0.57□□□□□ -2.32
ATG17YLR423C YKL065W-AQ2V2P2 73 aa0.57□□□□□ -2.32
ATG17YLR423C Q0017Q9ZZX8 53 aa0.57□□□□□ -2.32
ATG17YLR423C COA2Q3E823 68 aa0.56□□□□□ -2.32
ATG17YLR423C SWM2P40342 146 aa0.55□□□□□ -2.32
ATG17YLR423C YDR381C-AQ3E6R5 114 aa0.54□□□□□ -2.32
ATG17YLR423C YLR342W-AQ3E810 57 aa0.54□□□□□ -2.32
ATG17YLR423C YGR121W-AQ3E816 71 aa0.53□□□□□ -2.32
ATG17YLR423C DDR2P89113 61 aa0.51□□□□□ -2.33
ATG17YLR423C YOR314WQ12506 109 aa0.5□□□□□ -2.33
ATG17YLR423C YBL039W-BP0C268 59 aa0.49□□□□□ -2.33
ATG17YLR423C YHR213W-AQ8TGT4 77 aa0.48□□□□□ -2.33
ATG17YLR423C QCR9P22289 66 aa0.47□□□□□ -2.33
ATG17YLR423C YLR146W-AQ2V2P1 62 aa0.45□□□□□ -2.34
ATG17YLR423C YKL023C-AQ2V2P3 75 aa0.45□□□□□ -2.34
ATG17YLR423C YHR073W-AP0C5N7 58 aa0.43□□□□□ -2.34
ATG17YLR423C YBR230W-AQ3E762 66 aa0.41□□□□□ -2.34
ATG17YLR423C YCR108CQ3E819 63 aa0.41□□□□□ -2.34
ATG17YLR423C YJL127C-BQ3E828 52 aa0.4□□□□□ -2.35
ATG17YLR423C YLR157W-DP0CE99 70 aa0.39□□□□□ -2.35
ATG17YLR423C TOS6P48560 102 aa0.39□□□□□ -2.35
ATG17YLR423C YOR008C-AQ3E7B9 74 aa0.39□□□□□ -2.35
ATG17YLR423C YLL006W-AQ3E814 58 aa0.39□□□□□ -2.35
ATG17YLR423C RPL29P05747 59 aaPredicted RBP0.37□□□□□ -2.35
ATG17YLR423C YDL022C-AP0C5L6 82 aa0.37□□□□□ -2.35
ATG17YLR423C YBL044WP38194 122 aa0.37□□□□□ -2.35
ATG17YLR423C PAU7P39545 55 aa0.37□□□□□ -2.35
ATG17YLR423C YML054C-AQ3E809 52 aa0.35□□□□□ -2.35
ATG17YLR423C YOR316C-AQ3E806 69 aa0.29□□□□□ -2.36
ATG17YLR423C YJL133C-AQ3E7A3 74 aa0.28□□□□□ -2.36
ATG17YLR423C YDR246W-AQ3E763 66 aa0.27□□□□□ -2.37
ATG17YLR423C RPS30AP0CX33 63 aaKnown RBP0.23□□□□□ -2.37
ATG17YLR423C RPS30BP0CX34 63 aaKnown RBP0.23□□□□□ -2.37
ATG17YLR423C ATP17Q06405 101 aa0.21□□□□□ -2.38
ATG17YLR423C OLI1P61829 76 aa0.14□□□□□ -2.39
ATG17YLR423C VMA9Q3E7B6 73 aa0.14□□□□□ -2.39
ATG17YLR423C YDR119W-AQ2V2P9 66 aa0.13□□□□□ -2.39
ATG17YLR423C YHR050W-AQ05451 56 aa0.11□□□□□ -2.39
ATG17YLR423C YGR146C-AQ8TGT9 53 aa0.11□□□□□ -2.39
ATG17YLR423C YOR072W-BQ3E832 53 aa0.1□□□□□ -2.39
ATG17YLR423C YOR394C-AQ8TGJ0 55 aa0.08□□□□□ -2.4
ATG17YLR423C SSS1P35179 80 aa-0.02□□□□□ -2.41
ATG17YLR423C PAI3P01094 68 aa-0.04□□□□□ -2.42
ATG17YLR423C YDR182W-AQ3E796 67 aa-0.08□□□□□ -2.42
ATG17YLR423C YMR001C-AQ8TGS9 76 aa-0.1□□□□□ -2.43
ATG17YLR423C YFL041W-AQ3E817 63 aa-0.13□□□□□ -2.43
ATG17YLR423C HUB1Q6Q546 73 aa-0.14□□□□□ -2.43
ATG17YLR423C YIL102C-AQ2V2P5 75 aa-0.18□□□□□ -2.44
ATG17YLR423C YSY6P38374 65 aa-0.19□□□□□ -2.44
ATG17YLR423C YOL166W-AQ8TGJ1 51 aa-0.2□□□□□ -2.44
Retrieved 63 of 5,963 RNA–protein pairs in 35.4 ms