RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W YMR105W-AQ8TGS8 64 aa0.37□□□□□ -2.35
MSL1YIR009W YPR108W-AQ3E7B3 70 aa0.36□□□□□ -2.35
MSL1YIR009W Q0017Q9ZZX8 53 aa0.35□□□□□ -2.35
MSL1YIR009W QCR9P22289 66 aa0.34□□□□□ -2.36
MSL1YIR009W ATX1P38636 73 aa0.34□□□□□ -2.36
MSL1YIR009W YGR025WP53216 100 aa0.34□□□□□ -2.36
MSL1YIR009W YPR010C-AA5Z2X5 72 aa0.33□□□□□ -2.36
MSL1YIR009W TOM7P53507 60 aa0.32□□□□□ -2.36
MSL1YIR009W YIL134C-AQ45U18 67 aa0.32□□□□□ -2.36
MSL1YIR009W YHR213W-AQ8TGT4 77 aa0.32□□□□□ -2.36
MSL1YIR009W ATP17Q06405 101 aa0.3□□□□□ -2.36
MSL1YIR009W YLL066W-BQ8TGJ7 56 aa0.3□□□□□ -2.36
MSL1YIR009W TIM12P32830 109 aa0.29□□□□□ -2.36
MSL1YIR009W YBL044WP38194 122 aa0.29□□□□□ -2.36
MSL1YIR009W SPI1P40092 148 aa0.27□□□□□ -2.37
MSL1YIR009W ERI1P62651 68 aaKnown RBP0.27□□□□□ -2.37
MSL1YIR009W LSM2P38203 95 aaKnown RBP0.25□□□□□ -2.37
MSL1YIR009W PAU7P39545 55 aa0.24□□□□□ -2.37
MSL1YIR009W YKL018C-AQ3E7A7 99 aa0.24□□□□□ -2.37
MSL1YIR009W YFL041W-AQ3E817 63 aa0.24□□□□□ -2.37
MSL1YIR009W YCR108CQ3E819 63 aa0.24□□□□□ -2.37
MSL1YIR009W YDR246W-AQ3E763 66 aa0.23□□□□□ -2.37
MSL1YIR009W YBR200W-AQ3E755 54 aa0.22□□□□□ -2.37
MSL1YIR009W PAI3P01094 68 aa0.21□□□□□ -2.38
MSL1YIR009W SSS1P35179 80 aa0.21□□□□□ -2.38
MSL1YIR009W YOR011W-AQ3E807 68 aa0.21□□□□□ -2.38
MSL1YIR009W YOR394C-AQ8TGJ0 55 aa0.19□□□□□ -2.38
MSL1YIR009W YBL039W-BP0C268 59 aa0.18□□□□□ -2.38
MSL1YIR009W YLR146W-AQ2V2P1 62 aa0.18□□□□□ -2.38
MSL1YIR009W OLI1P61829 76 aa0.16□□□□□ -2.38
MSL1YIR009W HUB1Q6Q546 73 aa0.16□□□□□ -2.38
MSL1YIR009W YDR182W-AQ3E796 67 aa0.15□□□□□ -2.39
MSL1YIR009W YML054C-AQ3E809 52 aa0.13□□□□□ -2.39
MSL1YIR009W YSY6P38374 65 aa0.12□□□□□ -2.39
MSL1YIR009W RPS30AP0CX33 63 aaKnown RBP0.11□□□□□ -2.39
MSL1YIR009W RPS30BP0CX34 63 aaKnown RBP0.11□□□□□ -2.39
MSL1YIR009W PMP3P87284 55 aa0.1□□□□□ -2.39
MSL1YIR009W YOL166W-AQ8TGJ1 51 aa0.1□□□□□ -2.39
MSL1YIR009W YIL102C-AQ2V2P5 75 aa0.09□□□□□ -2.4
MSL1YIR009W YHR073W-AP0C5N7 58 aa0.08□□□□□ -2.4
MSL1YIR009W YGL258W-AQ3E740 77 aa0.08□□□□□ -2.4
MSL1YIR009W YOR008C-AQ3E7B9 74 aa0.08□□□□□ -2.4
MSL1YIR009W TOS6P48560 102 aa0.07□□□□□ -2.4
MSL1YIR009W YOL131WQ08270 108 aa0.07□□□□□ -2.4
MSL1YIR009W YMR001C-AQ8TGS9 76 aa0.05□□□□□ -2.4
MSL1YIR009W YOR192C-CQ3E736 78 aa0.04□□□□□ -2.4
MSL1YIR009W YBR230W-AQ3E762 66 aa0.02□□□□□ -2.41
MSL1YIR009W COX9P07255 59 aa0.01□□□□□ -2.41
MSL1YIR009W DDR2P89113 61 aa0.01□□□□□ -2.41
MSL1YIR009W VMA9Q3E7B6 73 aa0.01□□□□□ -2.41
MSL1YIR009W YLR157W-DP0CE99 70 aa-0.01□□□□□ -2.41
MSL1YIR009W YKL023C-AQ2V2P3 75 aa-0.03□□□□□ -2.41
MSL1YIR009W YLR342W-AQ3E810 57 aa-0.03□□□□□ -2.41
MSL1YIR009W YGR146C-AQ8TGT9 53 aa-0.03□□□□□ -2.41
MSL1YIR009W YHR050W-AQ05451 56 aa-0.06□□□□□ -2.42
MSL1YIR009W RPL29P05747 59 aaPredicted RBP-0.08□□□□□ -2.42
MSL1YIR009W SMX2P40204 77 aaKnown RBP-0.1□□□□□ -2.43
MSL1YIR009W YOR072W-BQ3E832 53 aa-0.12□□□□□ -2.43
MSL1YIR009W YJL127C-BQ3E828 52 aa-0.13□□□□□ -2.43
MSL1YIR009W YJL133C-AQ3E7A3 74 aa-0.14□□□□□ -2.43
MSL1YIR009W YLL006W-AQ3E814 58 aa-0.14□□□□□ -2.43
MSL1YIR009W COA2Q3E823 68 aa-0.14□□□□□ -2.43
MSL1YIR009W YOR316C-AQ3E806 69 aa-0.18□□□□□ -2.44
Retrieved 63 of 5,963 RNA–protein pairs in 22.6 ms