RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W PBI2P0CT04 75 aaKnown RBP0.55□□□□□ -2.32
SEC28YIL076W YBL044WP38194 122 aa0.55□□□□□ -2.32
SEC28YIL076W TDA2P40045 126 aa0.55□□□□□ -2.32
SEC28YIL076W YNL198CP40166 100 aa0.55□□□□□ -2.32
SEC28YIL076W GLC8P41818 229 aa0.55□□□□□ -2.32
SEC28YIL076W RPL38P49167 78 aaKnown RBP0.55□□□□□ -2.32
SEC28YIL076W SAE3P89114 91 aa0.55□□□□□ -2.32
SEC28YIL076W LSM8P47093 109 aaKnown RBP0.54□□□□□ -2.32
SEC28YIL076W RAD6P06104 172 aa0.53□□□□□ -2.32
SEC28YIL076W YGR039WP53225 103 aa0.53□□□□□ -2.32
SEC28YIL076W RPS30AP0CX33 63 aaKnown RBP0.52□□□□□ -2.33
SEC28YIL076W RPS30BP0CX34 63 aaKnown RBP0.52□□□□□ -2.33
SEC28YIL076W YKL065W-AQ2V2P2 73 aa0.52□□□□□ -2.33
SEC28YIL076W YIL156W-BQ2V2P4 73 aa0.52□□□□□ -2.33
SEC28YIL076W YCR085WP25650 117 aa0.51□□□□□ -2.33
SEC28YIL076W AIM4P38305 123 aaPredicted RBP0.51□□□□□ -2.33
SEC28YIL076W YLR285C-AQ3E771 56 aa0.51□□□□□ -2.33
SEC28YIL076W OLI1P61829 76 aa0.49□□□□□ -2.33
SEC28YIL076W NOP10Q6Q547 58 aaPredicted RBP0.49□□□□□ -2.33
SEC28YIL076W YSY6P38374 65 aa0.48□□□□□ -2.33
SEC28YIL076W YIL102CP40488 101 aa0.48□□□□□ -2.33
SEC28YIL076W MRX7P53869 86 aa0.48□□□□□ -2.33
SEC28YIL076W YFL041W-AQ3E817 63 aa0.48□□□□□ -2.33
SEC28YIL076W YOL166W-AQ8TGJ1 51 aa0.48□□□□□ -2.33
SEC28YIL076W YDR246W-AQ3E763 66 aa0.47□□□□□ -2.33
SEC28YIL076W YOR314WQ12506 109 aa0.46□□□□□ -2.34
SEC28YIL076W YOR394C-AQ8TGJ0 55 aa0.46□□□□□ -2.34
SEC28YIL076W YML100W-AQ8TGT0 57 aa0.46□□□□□ -2.34
SEC28YIL076W INO4P13902 151 aa0.45□□□□□ -2.34
SEC28YIL076W YBR201C-AQ2V2Q3 67 aa0.45□□□□□ -2.34
SEC28YIL076W ATX1P38636 73 aa0.44□□□□□ -2.34
SEC28YIL076W YDR182W-AQ3E796 67 aa0.44□□□□□ -2.34
SEC28YIL076W OST5Q92316 86 aa0.44□□□□□ -2.34
SEC28YIL076W YMR122CQ03879 124 aa0.42□□□□□ -2.34
SEC28YIL076W YDR119W-AQ2V2P9 66 aa0.42□□□□□ -2.34
SEC28YIL076W SDH6Q3E785 79 aa0.42□□□□□ -2.34
SEC28YIL076W YPL038W-AQ3E7B4 63 aa0.42□□□□□ -2.34
SEC28YIL076W ATP17Q06405 101 aa0.41□□□□□ -2.34
SEC28YIL076W YMR001C-AQ8TGS9 76 aa0.41□□□□□ -2.34
SEC28YIL076W YCR108CQ3E819 63 aa0.4□□□□□ -2.35
SEC28YIL076W HUB1Q6Q546 73 aa0.38□□□□□ -2.35
SEC28YIL076W YOR072W-BQ3E832 53 aa0.37□□□□□ -2.35
SEC28YIL076W TOM6P33448 61 aa0.35□□□□□ -2.35
SEC28YIL076W SLO1Q3E784 85 aa0.35□□□□□ -2.35
SEC28YIL076W YEL014CP39999 101 aa0.33□□□□□ -2.36
SEC28YIL076W YHR050W-AQ05451 56 aa0.31□□□□□ -2.36
SEC28YIL076W HHY1P39982 102 aa0.3□□□□□ -2.36
SEC28YIL076W QCR10P37299 77 aa0.29□□□□□ -2.36
SEC28YIL076W SBH1P52870 82 aa0.28□□□□□ -2.36
SEC28YIL076W YCR095W-AQ3E787 52 aa0.28□□□□□ -2.36
SEC28YIL076W RUB1Q03919 77 aa0.27□□□□□ -2.37
SEC28YIL076W YBR072C-AQ3E794 53 aa0.27□□□□□ -2.37
SEC28YIL076W YOR381W-AQ3E804 55 aa0.26□□□□□ -2.37
SEC28YIL076W YLR412C-AQ3E742 68 aa0.25□□□□□ -2.37
SEC28YIL076W SOM1Q05676 74 aa0.22□□□□□ -2.37
SEC28YIL076W YGL014C-AP0C5N1 53 aa0.2□□□□□ -2.38
SEC28YIL076W YLR157W-EP0CF00 54 aa0.18□□□□□ -2.38
SEC28YIL076W YNL277W-AQ3E7Z0 62 aa0.18□□□□□ -2.38
SEC28YIL076W RPS28AQ3E7X9 67 aaPredicted RBP0.16□□□□□ -2.38
SEC28YIL076W YIR021W-AQ3E739 70 aa0.15□□□□□ -2.39
SEC28YIL076W RPS28BP0C0X0 67 aaKnown RBP0.14□□□□□ -2.39
SEC28YIL076W YOL164W-AQ3E7A5 60 aa0.09□□□□□ -2.4
SEC28YIL076W YOR376W-AQ3E805 51 aa0.03□□□□□ -2.4
Retrieved 63 of 5,963 RNA–protein pairs in 9.6 ms