RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C YKL065W-AQ2V2P2 73 aa6.41□□□□□ -1.38
SHU1YHL006C YOR314WQ12506 109 aa6.39□□□□□ -1.39
SHU1YHL006C NOP10Q6Q547 58 aaPredicted RBP6.37□□□□□ -1.39
SHU1YHL006C RPS30AP0CX33 63 aaKnown RBP6.34□□□□□ -1.39
SHU1YHL006C RPS30BP0CX34 63 aaKnown RBP6.34□□□□□ -1.39
SHU1YHL006C YIL156W-BQ2V2P4 73 aa6.34□□□□□ -1.39
SHU1YHL006C YML054C-AQ3E809 52 aa6.31□□□□□ -1.4
SHU1YHL006C OLI1P61829 76 aa6.29□□□□□ -1.4
SHU1YHL006C YHR125WP38831 101 aa6.26□□□□□ -1.41
SHU1YHL006C YBL044WP38194 122 aa6.24□□□□□ -1.41
SHU1YHL006C SLO1Q3E784 85 aa6.24□□□□□ -1.41
SHU1YHL006C YFL065CP43539 102 aa6.23□□□□□ -1.41
SHU1YHL006C YPR203WQ08994 102 aa6.23□□□□□ -1.41
SHU1YHL006C RPS29BP41058 56 aaKnown RBP6.2□□□□□ -1.42
SHU1YHL006C YOL166W-AQ8TGJ1 51 aa6.18□□□□□ -1.42
SHU1YHL006C YFR032C-BQ8TGU2 87 aa6.16□□□□□ -1.42
SHU1YHL006C RPS29AP41057 56 aaKnown RBP6.15□□□□□ -1.42
SHU1YHL006C YDR246W-AQ3E763 66 aa6.15□□□□□ -1.42
SHU1YHL006C YDR119W-AQ2V2P9 66 aa6.05□□□□□ -1.44
SHU1YHL006C MRX7P53869 86 aa6.04□□□□□ -1.44
SHU1YHL006C YPL038W-AQ3E7B4 63 aa6.03□□□□□ -1.44
SHU1YHL006C AIM4P38305 123 aaPredicted RBP6.01□□□□□ -1.45
SHU1YHL006C YBR201C-AQ2V2Q3 67 aa6.01□□□□□ -1.45
SHU1YHL006C YDR182W-AQ3E796 67 aa6□□□□□ -1.45
SHU1YHL006C RPL37AP49166 88 aaKnown RBP5.96□□□□□ -1.46
SHU1YHL006C OST5Q92316 86 aa5.95□□□□□ -1.46
SHU1YHL006C SDH6Q3E785 79 aa5.92□□□□□ -1.46
SHU1YHL006C RUB1Q03919 77 aa5.8□□□□□ -1.48
SHU1YHL006C YMR001C-AQ8TGS9 76 aa5.76□□□□□ -1.49
SHU1YHL006C YOR394C-AQ8TGJ0 55 aa5.75□□□□□ -1.49
SHU1YHL006C HUB1Q6Q546 73 aa5.7□□□□□ -1.5
SHU1YHL006C TOM6P33448 61 aa5.64□□□□□ -1.51
SHU1YHL006C ATP17Q06405 101 aa5.53□□□□□ -1.52
SHU1YHL006C YMR122CQ03879 124 aa5.38□□□□□ -1.55
SHU1YHL006C YER188C-AP0C0V2 99 aa5.36□□□□□ -1.55
SHU1YHL006C YIL002W-AQ3E7Z5 69 aa5.3□□□□□ -1.56
SHU1YHL006C YCR108CQ3E819 63 aa5.28□□□□□ -1.56
SHU1YHL006C YOR072W-BQ3E832 53 aa5.07□□□□□ -1.6
SHU1YHL006C YEL014CP39999 101 aa5.06□□□□□ -1.6
SHU1YHL006C YCR095W-AQ3E787 52 aa5.06□□□□□ -1.6
SHU1YHL006C YOR381W-AQ3E804 55 aa5.05□□□□□ -1.6
SHU1YHL006C YIR021W-AQ3E739 70 aa4.81□□□□□ -1.64
SHU1YHL006C QCR10P37299 77 aa4.69□□□□□ -1.66
SHU1YHL006C HHY1P39982 102 aa4.63□□□□□ -1.67
SHU1YHL006C SBH1P52870 82 aa4.55□□□□□ -1.68
SHU1YHL006C YER175W-AQ8TGU4 54 aa4.49□□□□□ -1.69
SHU1YHL006C YBR121C-AP0C5L4 52 aa4.4□□□□□ -1.71
SHU1YHL006C YLR412C-AQ3E742 68 aa4.34□□□□□ -1.71
SHU1YHL006C YBR072C-AQ3E794 53 aa4.28□□□□□ -1.72
SHU1YHL006C YHR050W-AQ05451 56 aa4.27□□□□□ -1.73
SHU1YHL006C YGL014C-AP0C5N1 53 aa4.26□□□□□ -1.73
SHU1YHL006C RPS28BP0C0X0 67 aaKnown RBP4.25□□□□□ -1.73
SHU1YHL006C RPS28AQ3E7X9 67 aaPredicted RBP4.25□□□□□ -1.73
SHU1YHL006C SOM1Q05676 74 aa4.2□□□□□ -1.74
SHU1YHL006C YNL277W-AQ3E7Z0 62 aa4.05□□□□□ -1.76
SHU1YHL006C YML100W-AQ8TGT0 57 aa3.87□□□□□ -1.79
SHU1YHL006C YOR376W-AQ3E805 51 aa3.81□□□□□ -1.8
SHU1YHL006C YER078W-AQ3E7A2 54 aa3.62□□□□□ -1.83
SHU1YHL006C YAL067W-AQ8TGK6 75 aa3.59□□□□□ -1.83
SHU1YHL006C YHR032W-AP0C5N6 59 aa3.51□□□□□ -1.85
SHU1YHL006C YLR157W-EP0CF00 54 aa3.16□□□□□ -1.9
SHU1YHL006C YOL164W-AQ3E7A5 60 aa2.95□□□□□ -1.94
SHU1YHL006C YHR086W-AQ3E746 53 aa2.82□□□□□ -1.96
Retrieved 63 of 5,963 RNA–protein pairs in 6.4 ms